Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:11 (635): wrapper (7.7.26015): starting
18:11:11 (635): wrapper: running run_atlas (--nthreads 8)
[2026-01-22 18:11:12] Arguments: --nthreads 8
[2026-01-22 18:11:12] Threads: 8
[2026-01-22 18:11:12] Checking for CVMFS
[2026-01-22 18:11:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 18:11:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 18:11:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 18:11:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 18:11:12] 2.11.2.0 21766 200421 143772 155414 2 9 10198906 18432001 1833 130560 0 133743815 99.981 7559668 27600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-22 18:11:12] CVMFS is ok
[2026-01-22 18:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 18:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 18:11:12] Further information can be found at the LHC@home message board.
[2026-01-22 18:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 18:11:12] Checking for apptainer binary...
[2026-01-22 18:11:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 18:11:12] Running /usr/bin/apptainer --version
[2026-01-22 18:11:12] apptainer version 1.3.2-1.el7
[2026-01-22 18:11:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 18:11:13] c-206-18.aglt2.org
[2026-01-22 18:11:13] apptainer works
[2026-01-22 18:11:13] Set ATHENA_PROC_NUMBER=8
[2026-01-22 18:11:13] Set ATHENA_CORE_NUMBER=8
[2026-01-22 18:11:13] Starting ATLAS job with PandaID=6969458033
[2026-01-22 18:11:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 20:10:41]  *** The last 200 lines of the pilot log: ***
[2026-01-22 20:10:41] 2026-01-23 01:09:50,809 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2372.5416666666665
[2026-01-22 20:10:41] 2026-01-23 01:09:50,811 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969458033/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,812 | INFO     | extracted standard info from prmon json
[2026-01-22 20:10:41] 2026-01-23 01:09:50,812 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 20:10:41] 2026-01-23 01:09:50,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 20:10:41] 2026-01-23 01:09:50,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 20:10:41] 2026-01-23 01:09:50,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 20:10:41] 2026-01-23 01:09:50,814 | INFO     | fitting pss+swap vs Time
[2026-01-22 20:10:41] 2026-01-23 01:09:50,814 | INFO     | sum of square deviations: 483971865.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,815 | INFO     | sum of deviations: 16562158861.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,815 | INFO     | mean x: 1769127016.5
[2026-01-22 20:10:41] 2026-01-23 01:09:50,815 | INFO     | mean y: 2502725.8620689656
[2026-01-22 20:10:41] 2026-01-23 01:09:50,815 | INFO     | intersect: -60539369253.74148
[2026-01-22 20:10:41] 2026-01-23 01:09:50,815 | INFO     | chi2: 1.465051721205435
[2026-01-22 20:10:41] 2026-01-23 01:09:50,816 | INFO     | sum of square deviations: 424045160.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,816 | INFO     | sum of deviations: 16084919444.000002
[2026-01-22 20:10:41] 2026-01-23 01:09:50,816 | INFO     | mean x: 1769126864.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,816 | INFO     | mean y: 2501511.5225225226
[2026-01-22 20:10:41] 2026-01-23 01:09:50,816 | INFO     | intersect: -67104179044.99261
[2026-01-22 20:10:41] 2026-01-23 01:09:50,817 | INFO     | chi2: 1.4656227436527876
[2026-01-22 20:10:41] 2026-01-23 01:09:50,817 | INFO     | current chi2=1.4656227436527876 (change=-0.03897626541694289 %)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,817 | INFO     | right removable region: 110
[2026-01-22 20:10:41] 2026-01-23 01:09:50,817 | INFO     | sum of square deviations: 424045160.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | sum of deviations: -2059268378.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | mean x: 1769127169.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | mean y: 2549376.081081081
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | intersect: 8593869309.510723
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | chi2: 0.03597845006944277
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | current chi2=0.03597845006944277 (change=97.54421980134327 %)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,818 | INFO     | sum of square deviations: 369281342.5
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | sum of deviations: -3882863896.5000014
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | mean x: 1769127321.5
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | mean y: 2554328.2735849055
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | intersect: 18604308098.067955
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | chi2: 0.008772886396139414
[2026-01-22 20:10:41] 2026-01-23 01:09:50,819 | INFO     | current chi2=0.008772886396139414 (change=75.61627480003536 %)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,820 | INFO     | sum of square deviations: 319447850.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,820 | INFO     | sum of deviations: -3998865248.0000005
[2026-01-22 20:10:41] 2026-01-23 01:09:50,820 | INFO     | mean x: 1769127474.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,820 | INFO     | mean y: 2554679.7425742573
[2026-01-22 20:10:41] 2026-01-23 01:09:50,820 | INFO     | intersect: 22148586888.319416
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | chi2: 0.00731896927260602
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | current chi2=0.00731896927260602 (change=16.57284795313436 %)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | left removable region: 30
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | sum of square deviations: 158737860.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | sum of deviations: -3048979287.0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | mean x: 1769127748.5
[2026-01-22 20:10:41] 2026-01-23 01:09:50,821 | INFO     | mean y: 2553944.025
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | intersect: 33983318591.05656
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | chi2: 0.004625248592604834
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | current memory leak: -19.21 B/s (using 80 data points, chi2=0.00)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | could have reported an average CPU frequency of 2553 MHz (7 samples)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | ..............................
[2026-01-22 20:10:41] 2026-01-23 01:09:50,822 | INFO     | . Timing measurements:
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . get job = 0 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . initial setup = 2 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . payload setup = 4 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . stage-in = 0 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . payload execution = 7076 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . stage-out = 0 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | . log creation = 0 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,823 | INFO     | ..............................
[2026-01-22 20:10:41] 2026-01-23 01:09:50,896 | INFO     | 
[2026-01-22 20:10:41] 2026-01-23 01:09:50,896 | INFO     | job summary report
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | --------------------------------------------------
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | PanDA job id: 6969458033
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | task id: 48215263
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | errors: (none)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 20:10:41] 2026-01-23 01:09:50,910 | INFO     | pilot state: finished 
[2026-01-22 20:10:41] 2026-01-23 01:09:50,911 | INFO     | transexitcode: 0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,911 | INFO     | exeerrorcode: 0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,911 | INFO     | exeerrordiag: 
[2026-01-22 20:10:41] 2026-01-23 01:09:50,911 | INFO     | exitcode: 0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,911 | INFO     | exitmsg: OK
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | cpuconsumptiontime: 53070 s
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | nevents: 400
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | neventsw: 0
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | pid: 10888
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | pgrp: 10888
[2026-01-22 20:10:41] 2026-01-23 01:09:50,912 | INFO     | corecount: 8
[2026-01-22 20:10:41] 2026-01-23 01:09:50,913 | INFO     | event service: False
[2026-01-22 20:10:41] 2026-01-23 01:09:50,913 | INFO     | sizes: {0: 2283779, 1: 2283978, 4: 2284240, 12: 2284268, 7084: 2311462, 7086: 2320460, 7088: 2320644, 7092: 2320838}
[2026-01-22 20:10:41] 2026-01-23 01:09:50,913 | INFO     | --------------------------------------------------
[2026-01-22 20:10:41] 2026-01-23 01:09:50,913 | INFO     | 
[2026-01-22 20:10:41] 2026-01-23 01:09:50,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-22 20:10:41] 2026-01-23 01:09:50,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 20:10:41] 2026-01-23 01:09:50,932 | INFO     | job 6969458033 has completed (purged errors)
[2026-01-22 20:10:41] 2026-01-23 01:09:50,932 | INFO     | overall cleanup function is called
[2026-01-22 20:10:41] 2026-01-23 01:09:51,940 | INFO     | --- collectZombieJob: --- 10, [10888]
[2026-01-22 20:10:41] 2026-01-23 01:09:51,940 | INFO     | zombie collector waiting for pid 10888
[2026-01-22 20:10:41] 2026-01-23 01:09:51,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 20:10:41] 2026-01-23 01:09:51,941 | INFO     | collected zombie processes
[2026-01-22 20:10:41] 2026-01-23 01:09:51,941 | INFO     | will attempt to kill all subprocesses of pid=10888
[2026-01-22 20:10:41] 2026-01-23 01:09:52,085 | INFO     | process IDs to be killed: [10888] (in reverse order)
[2026-01-22 20:10:41] 2026-01-23 01:09:52,124 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 20:10:41] 2026-01-23 01:09:52,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 20:10:41] 2026-01-23 01:09:52,130 | INFO     | did not find any defunct processes belonging to 10888
[2026-01-22 20:10:41] 2026-01-23 01:09:52,135 | INFO     | did not find any defunct processes belonging to 10888
[2026-01-22 20:10:41] 2026-01-23 01:09:52,135 | INFO     | ready for new job
[2026-01-22 20:10:41] 2026-01-23 01:09:52,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 20:10:41] 2026-01-23 01:09:52,137 | INFO     | ***************************************
[2026-01-22 20:10:41] 2026-01-23 01:09:52,137 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-22 20:10:41] 2026-01-23 01:09:52,137 | INFO     | ***************************************
[2026-01-22 20:10:41] 2026-01-23 01:09:52,137 | INFO     | 
[2026-01-22 20:10:41] 2026-01-23 01:09:52,139 | INFO     | architecture information:
[2026-01-22 20:10:41] 2026-01-23 01:09:52,139 | INFO     | executing command: cat /etc/os-release
[2026-01-22 20:10:41] 2026-01-23 01:09:52,153 | INFO     | cat /etc/os-release:
[2026-01-22 20:10:41] NAME="CentOS Linux"
[2026-01-22 20:10:41] VERSION="7 (Core)"
[2026-01-22 20:10:41] ID="centos"
[2026-01-22 20:10:41] ID_LIKE="rhel fedora"
[2026-01-22 20:10:41] VERSION_ID="7"
[2026-01-22 20:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 20:10:41] ANSI_COLOR="0;31"
[2026-01-22 20:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 20:10:41] HOME_URL="https://www.centos.org/"
[2026-01-22 20:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 20:10:41] 
[2026-01-22 20:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 20:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 20:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 20:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 20:10:41] 
[2026-01-22 20:10:41] 2026-01-23 01:09:52,154 | INFO     | ***************************************
[2026-01-22 20:10:41] 2026-01-23 01:09:52,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-22 20:10:41] 2026-01-23 01:09:52,684 | INFO     | sufficient remaining disk space (27446476800 B)
[2026-01-22 20:10:41] 2026-01-23 01:09:52,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 20:10:41] 2026-01-23 01:09:52,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 20:10:41] 2026-01-23 01:09:52,685 | INFO     | update_server=False
[2026-01-22 20:10:41] 2026-01-23 01:09:52,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 20:10:41] 2026-01-23 01:09:52,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 20:10:41] 2026-01-23 01:09:52,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-22 20:10:41] 2026-01-23 01:09:52,915 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-22 20:10:41] 2026-01-23 01:09:52,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 20:10:41] 2026-01-23 01:09:52,916 | INFO     | will abort loop
[2026-01-22 20:10:41] 2026-01-23 01:09:53,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 20:10:41] 2026-01-23 01:09:53,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 20:10:41] 2026-01-23 01:09:53,408 | INFO     | all data control threads have been joined
[2026-01-22 20:10:41] 2026-01-23 01:09:53,690 | INFO     | [job] retrieve thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,691 | INFO     | [job] queue monitor thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,787 | INFO     | [job] validate thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,890 | INFO     | [payload] validate_post thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,922 | INFO     | [job] job monitor thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,933 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:53,973 | INFO     | all payload control threads have been joined
[2026-01-22 20:10:41] 2026-01-23 01:09:54,011 | INFO     | all job control threads have been joined
[2026-01-22 20:10:41] 2026-01-23 01:09:54,097 | INFO     | [payload] failed_post thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:54,164 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:54,413 | INFO     | [data] control thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:54,659 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:54,712 | INFO     | [data] copytool_in thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:54,978 | INFO     | [payload] control thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:55,016 | INFO     | [job] control thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:55,020 | INFO     | [data] copytool_out thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:09:57,291 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 20:10:41] 2026-01-23 01:10:21,912 | INFO     | 7110s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-22 20:10:41] 2026-01-23 01:10:23,112 | INFO     | PID=4461 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-22 20:10:41] 2026-01-23 01:10:23,113 | INFO     | .. there are 3 such processes running
[2026-01-22 20:10:41] 2026-01-23 01:10:23,113 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 20:10:41] 2026-01-23 01:10:23,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 20:10:41] 2026-01-23 01:10:23,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 20:10:41] 2026-01-23 01:10:34,806 | INFO     | [monitor] cgroup control has ended
[2026-01-22 20:10:41] 2026-01-23 01:10:36,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897469503296)>', '<ExcThread(monitor, started 139896807220992)>']
[2026-01-22 20:10:41] 2026-01-23 01:10:37,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 20:10:41] 2026-01-23 01:10:37,185 | INFO     | [monitor] control thread has ended
[2026-01-22 20:10:41] 2026-01-23 01:10:41,686 | INFO     | all workflow threads have been joined
[2026-01-22 20:10:41] 2026-01-23 01:10:41,687 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 20:10:41] 2026-01-23 01:10:41,687 | INFO     | traces error code: 0
[2026-01-22 20:10:41] 2026-01-23 01:10:41,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 20:10:41] 2026-01-23 01:10:41,806 [wrapper] ==== pilot stdout END ====
[2026-01-22 20:10:41] 2026-01-23 01:10:41,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 20:10:41] 2026-01-23 01:10:41,811 [wrapper] pilotpid: 4461
[2026-01-22 20:10:41] 2026-01-23 01:10:41,813 [wrapper] Pilot exit status: 0
[2026-01-22 20:10:41] 2026-01-23 01:10:41,823 [wrapper] pandaids: 6969458033
[2026-01-22 20:10:41] 2026-01-23 01:10:41,851 [wrapper] cleanup supervisor_pilot 26614 4462
[2026-01-22 20:10:41] 2026-01-23 01:10:41,853 [wrapper] Test setup, not cleaning
[2026-01-22 20:10:41] 2026-01-23 01:10:41,855 [wrapper] apfmon messages muted
[2026-01-22 20:10:41] 2026-01-23 01:10:41,857 [wrapper] ==== wrapper stdout END ====
[2026-01-22 20:10:41] 2026-01-23 01:10:41,859 [wrapper] ==== wrapper stderr END ====
[2026-01-22 20:10:41]  *** Error codes and diagnostics ***
[2026-01-22 20:10:41]     "exeErrorCode": 0,
[2026-01-22 20:10:41]     "exeErrorDiag": "",
[2026-01-22 20:10:41]     "pilotErrorCode": 0,
[2026-01-22 20:10:41]     "pilotErrorDiag": "",
[2026-01-22 20:10:41]  *** Listing of results directory ***
[2026-01-22 20:10:41] total 735416
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 08:11 pilot3.tar.gz
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 08:11 queuedata.json
[2026-01-22 20:10:41] -rwx------ 1 boincer umatlas     36322 Jan 14 08:14 runpilot2-wrapper.sh
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas       100 Jan 22 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 20:10:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan 22 18:11 run_atlas
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas       105 Jan 22 18:11 job.xml
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas 593606216 Jan 22 18:11 EVNT.32794306._000886.pool.root.1
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas     15847 Jan 22 18:11 start_atlas.sh
[2026-01-22 20:10:41] drwxrwx--x 2 boincer umatlas      4096 Jan 22 18:11 shared
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas    592404 Jan 22 18:11 input.tar.gz
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas         0 Jan 22 18:11 boinc_lockfile
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas      2508 Jan 22 18:11 pandaJob.out
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas        57 Jan 22 18:11 setup.sh.local
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas   1003905 Jan 22 18:11 agis_schedconf.cvmfs.json
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas   1516246 Jan 22 18:11 agis_ddmendpoints.agis.ALL.json
[2026-01-22 20:10:41] drwx------ 5 boincer umatlas      4096 Jan 22 18:11 pilot3
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas      5950 Jan 22 20:02 init_data.xml
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas 152771256 Jan 22 20:09 HITS.48215263._022121.pool.root.1
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas       531 Jan 22 20:09 boinc_task_state.xml
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas      1066 Jan 22 20:09 memory_monitor_summary.json
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas    365084 Jan 22 20:09 log.48215263._022121.job.log.tgz.1
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas        95 Jan 22 20:09 pilot_heartbeat.json
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas      7854 Jan 22 20:09 heartbeat.json
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas      8192 Jan 22 20:10 boinc_mmap_file
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas        27 Jan 22 20:10 wrapper_checkpoint.txt
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas      5121 Jan 22 20:10 pilotlog.txt
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas   1013017 Jan 22 20:10 log.48215263._022121.job.log.1
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas       357 Jan 22 20:10 output.list
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas       620 Jan 22 20:10 runtime_log
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas   1392640 Jan 22 20:10 result.tar.gz
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas      9342 Jan 22 20:10 runtime_log.err
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas       658 Jan 22 20:10 p5aNDmnsF08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZHrKDmwQB6Mm.diag
[2026-01-22 20:10:41] -rw-r--r-- 1 boincer umatlas     21091 Jan 22 20:10 stderr.txt
[2026-01-22 20:10:41] HITS file was successfully produced:
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas 152771256 Jan 22 20:09 shared/HITS.pool.root.1
[2026-01-22 20:10:41]  *** Contents of shared directory: ***
[2026-01-22 20:10:41] total 730852
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas 593606216 Jan 22 18:11 ATLAS.root_0
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas     15847 Jan 22 18:11 start_atlas.sh
[2026-01-22 20:10:41] -rw-r--r-- 2 boincer umatlas    592404 Jan 22 18:11 input.tar.gz
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas 152771256 Jan 22 20:09 HITS.pool.root.1
[2026-01-22 20:10:41] -rw------- 1 boincer umatlas   1392640 Jan 22 20:10 result.tar.gz
20:10:43 (635): run_atlas exited; CPU time 53147.817146
20:10:43 (635): called boinc_finish(0)

</stderr_txt>
]]>

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