Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:47 (705099): wrapper (7.7.26015): starting
12:52:47 (705099): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 12:52:47] Arguments: --nthreads 4
[2026-01-23 12:52:47] Threads: 4
[2026-01-23 12:52:47] Checking for CVMFS
[2026-01-23 12:52:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 12:52:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 12:52:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 12:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 12:52:48] 2.9.2.0 41542 4097 104192 155428 1 188 21997352 36864001 0 130560 0 1890414 99.988 104256 10067 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-23 12:52:48] CVMFS is ok
[2026-01-23 12:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 12:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 12:52:48] Further information can be found at the LHC@home message board.
[2026-01-23 12:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 12:52:48] Checking for apptainer binary...
[2026-01-23 12:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 12:52:48] Running /usr/bin/apptainer --version
[2026-01-23 12:52:48] apptainer version 1.4.1-1.1
[2026-01-23 12:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 12:52:48] thA332a
[2026-01-23 12:52:48] apptainer works
[2026-01-23 12:52:48] Set ATHENA_PROC_NUMBER=4
[2026-01-23 12:52:48] Set ATHENA_CORE_NUMBER=4
[2026-01-23 12:52:48] Starting ATLAS job with PandaID=6977696468
[2026-01-23 12:52:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 14:01:11]  *** The last 200 lines of the pilot log: ***
[2026-01-23 14:01:11] 2026-01-23 13:00:22,255 | INFO     | aborting loop
[2026-01-23 14:01:11] 2026-01-23 13:00:22,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 14:01:11] 2026-01-23 13:00:22,455 | INFO     | job.realtimelogging is not enabled
[2026-01-23 14:01:11] 2026-01-23 13:00:22,490 | INFO     | all data control threads have been joined
[2026-01-23 14:01:11] 2026-01-23 13:00:22,855 | INFO     | all payload control threads have been joined
[2026-01-23 14:01:11] 2026-01-23 13:00:23,260 | INFO     | [job] retrieve thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,261 | INFO     | [job] queue monitor thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,261 | INFO     | [job] job monitor thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,377 | INFO     | all job control threads have been joined
[2026-01-23 14:01:11] 2026-01-23 13:00:23,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,496 | INFO     | [data] control thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 14:01:11] 2026-01-23 13:00:23,613 | INFO     | [payload] validate_post thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:23,861 | INFO     | [payload] control thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,132 | INFO     | [job] validate thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,262 | INFO     | [data] copytool_out thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,264 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,352 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,367 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,383 | INFO     | [job] control thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,504 | INFO     | [data] copytool_in thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:24,682 | INFO     | [payload] failed_post thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:27,595 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 14:01:11] 2026-01-23 13:00:51,872 | INFO     | PID=709214 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 14:01:11] 2026-01-23 13:00:51,872 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 14:01:11] 2026-01-23 13:00:51,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 14:01:11] 2026-01-23 13:00:51,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 14:01:11] 2026-01-23 13:01:05,477 | INFO     | [monitor] cgroup control has ended
[2026-01-23 14:01:11] 2026-01-23 13:01:06,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958149678912)>', '<ExcThread(monitor, started 139957205198592)>']
[2026-01-23 14:01:11] 2026-01-23 13:01:06,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 14:01:11] 2026-01-23 13:01:06,952 | INFO     | [monitor] control thread has ended
[2026-01-23 14:01:11] 2026-01-23 13:01:11,210 | INFO     | all workflow threads have been joined
[2026-01-23 14:01:11] 2026-01-23 13:01:11,211 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 14:01:11] 2026-01-23 13:01:11,211 | INFO     | traces error code: 0
[2026-01-23 14:01:11] 2026-01-23 13:01:11,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 14:01:11] 2026-01-23 13:01:11,293 [wrapper] ==== pilot stdout END ====
[2026-01-23 14:01:11] 2026-01-23 13:01:11,297 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 14:01:11] 2026-01-23 13:01:11,300 [wrapper] pilotpid: 709214
[2026-01-23 14:01:11] 2026-01-23 13:01:11,304 [wrapper] Pilot exit status: 0
[2026-01-23 14:01:11] 2026-01-23 13:01:11,315 [wrapper] pandaids: 6977696468
[2026-01-23 14:01:11] 2026-01-23 13:01:11,339 [wrapper] cleanup supervisor_pilot  718897 709215
[2026-01-23 14:01:11] 2026-01-23 13:01:11,343 [wrapper] Test setup, not cleaning
[2026-01-23 14:01:11] 2026-01-23 13:01:11,347 [wrapper] apfmon messages muted
[2026-01-23 14:01:11] 2026-01-23 13:01:11,351 [wrapper] ==== wrapper stdout END ====
[2026-01-23 14:01:11] 2026-01-23 13:01:11,354 [wrapper] ==== wrapper stderr END ====
[2026-01-23 14:01:11]  *** Error codes and diagnostics ***
[2026-01-23 14:01:11]     "exeErrorCode": 0,
[2026-01-23 14:01:11]     "exeErrorDiag": "",
[2026-01-23 14:01:11]     "pilotErrorCode": 0,
[2026-01-23 14:01:11]     "pilotErrorDiag": "",
[2026-01-23 14:01:11]  *** Listing of results directory ***
[2026-01-23 14:01:11] total 657952
[2026-01-23 14:01:11] -rwx------ 1 boinc boinc     36322 Jan 22 18:45 runpilot2-wrapper.sh
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      5111 Jan 22 18:47 queuedata.json
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc    584422 Jan 22 18:47 pilot3.tar.gz
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc       100 Jan 23 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 14:01:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 12:52 run_atlas
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc       105 Jan 23 12:52 job.xml
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc 488739338 Jan 23 12:52 EVNT.48301084._000200.pool.root.1
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc    597757 Jan 23 12:52 input.tar.gz
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc     15845 Jan 23 12:52 start_atlas.sh
[2026-01-23 14:01:11] drwxrwx--x 2 boinc boinc      4096 Jan 23 12:52 shared
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc         0 Jan 23 12:52 boinc_setup_complete
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      6370 Jan 23 12:52 init_data.xml
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc         0 Jan 23 12:52 boinc_lockfile
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      2520 Jan 23 12:52 pandaJob.out
[2026-01-23 14:01:11] -rw------- 1 boinc boinc   1003905 Jan 23 12:52 agis_schedconf.cvmfs.json
[2026-01-23 14:01:11] -rw------- 1 boinc boinc   1516246 Jan 23 12:52 agis_ddmendpoints.agis.ALL.json
[2026-01-23 14:01:11] -rw------- 1 boinc boinc       428 Jan 23 12:52 workernode_map.json
[2026-01-23 14:01:11] drwx------ 5 boinc boinc      4096 Jan 23 12:53 pilot3
[2026-01-23 14:01:11] -rw------- 1 boinc boinc 179287221 Jan 23 13:59 HITS.48301086._010009.pool.root.1
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc       531 Jan 23 14:00 boinc_task_state.xml
[2026-01-23 14:01:11] -rw------- 1 boinc boinc      1018 Jan 23 14:00 memory_monitor_summary.json
[2026-01-23 14:01:11] -rw------- 1 boinc boinc    292998 Jan 23 14:00 log.48301086._010009.job.log.tgz.1
[2026-01-23 14:01:11] -rw------- 1 boinc boinc        95 Jan 23 14:00 pilot_heartbeat.json
[2026-01-23 14:01:11] -rw------- 1 boinc boinc      6310 Jan 23 14:00 heartbeat.json
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      8192 Jan 23 14:00 boinc_mmap_file
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc        27 Jan 23 14:01 wrapper_checkpoint.txt
[2026-01-23 14:01:11] -rw------- 1 boinc boinc      4819 Jan 23 14:01 pilotlog.txt
[2026-01-23 14:01:11] -rw------- 1 boinc boinc    601562 Jan 23 14:01 log.48301086._010009.job.log.1
[2026-01-23 14:01:11] -rw------- 1 boinc boinc       357 Jan 23 14:01 output.list
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc       620 Jan 23 14:01 runtime_log
[2026-01-23 14:01:11] -rw------- 1 boinc boinc    911360 Jan 23 14:01 result.tar.gz
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      8901 Jan 23 14:01 runtime_log.err
[2026-01-23 14:01:11] -rw------- 1 boinc boinc       658 Jan 23 14:01 LzIKDmlvD38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiPuKDmmsbzMo.diag
[2026-01-23 14:01:11] -rw-r--r-- 1 boinc boinc      7031 Jan 23 14:01 stderr.txt
[2026-01-23 14:01:11] HITS file was successfully produced:
[2026-01-23 14:01:11] -rw------- 1 boinc boinc 179287221 Jan 23 13:59 shared/HITS.pool.root.1
[2026-01-23 14:01:11]  *** Contents of shared directory: ***
[2026-01-23 14:01:11] total 653876
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc 488739338 Jan 23 12:52 ATLAS.root_0
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc    597757 Jan 23 12:52 input.tar.gz
[2026-01-23 14:01:11] -rw-r--r-- 2 boinc boinc     15845 Jan 23 12:52 start_atlas.sh
[2026-01-23 14:01:11] -rw------- 1 boinc boinc 179287221 Jan 23 13:59 HITS.pool.root.1
[2026-01-23 14:01:11] -rw------- 1 boinc boinc    911360 Jan 23 14:01 result.tar.gz
14:01:13 (705099): run_atlas exited; CPU time 15190.086520
14:01:13 (705099): called boinc_finish(0)

</stderr_txt>
]]>

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