Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:53:03 (1836237): wrapper (7.7.26015): starting
21:53:03 (1836237): wrapper: running run_atlas (--nthreads 8)
[2026-01-22 21:53:03] Arguments: --nthreads 8
[2026-01-22 21:53:03] Threads: 8
[2026-01-22 21:53:03] Checking for CVMFS
[2026-01-22 21:53:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 21:53:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 21:53:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 21:53:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 21:53:08] 2.13.1.0 1836468 0 30112 155409 3 1 3278649 6144000 0 130560 0 0 0.000 1336 649 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-22 21:53:08] CVMFS is ok
[2026-01-22 21:53:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 21:53:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-22 21:53:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-22 21:53:08] Further information can be found at the LHC@home message board.
[2026-01-22 21:53:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 21:53:08] Checking for apptainer binary...
[2026-01-22 21:53:08] apptainer is not installed, using version from CVMFS
[2026-01-22 21:53:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 21:53:08] debian
[2026-01-22 21:53:08] apptainer works
[2026-01-22 21:53:09] Set ATHENA_PROC_NUMBER=8
[2026-01-22 21:53:09] Set ATHENA_CORE_NUMBER=8
[2026-01-22 21:53:09] Starting ATLAS job with PandaID=6979592556
[2026-01-22 21:53:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/sebastien/BOINC_TEST/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 23:30:04]  *** The last 200 lines of the pilot log: ***
[2026-01-22 23:30:04]  guid=50cce15c-ed84-43c6-a0dc-69b252bd7e71
[2026-01-22 23:30:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 23:30:04]  is_altstaged=None
[2026-01-22 23:30:04]  is_tar=False
[2026-01-22 23:30:04]  lfn=log.48313399._000179.job.log.tgz.1
[2026-01-22 23:30:04]  mtime=0
[2026-01-22 23:30:04]  protocol_id=None
[2026-01-22 23:30:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 23:30:04]  replicas=None
[2026-01-22 23:30:04]  scope=mc23_13p6TeV
[2026-01-22 23:30:04]  status=None
[2026-01-22 23:30:04]  status_code=0
[2026-01-22 23:30:04]  storage_token=
[2026-01-22 23:30:04]  surl=/home/sebastien/BOINC_TEST/BOINC/slots/8/PanDA_Pilot-6979592556/log.48313399._000179.job.log.tgz.1
[2026-01-22 23:30:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/dd/log.48313399._000179.job.log.tgz.1
[2026-01-22 23:30:04]  workdir=None
[2026-01-22 23:30:04] ]
[2026-01-22 23:30:04] 2026-01-22 22:29:27,684 | INFO     | transferring file log.48313399._000179.job.log.tgz.1 from /home/sebastien/BOINC_TEST/BOINC/slots/8/PanDA_Pilot-6979592556/log.48313399._000179.job.log.tgz.1 to /ho
[2026-01-22 23:30:04] 2026-01-22 22:29:27,684 | INFO     | executing command: /usr/bin/env mv /home/sebastien/BOINC_TEST/BOINC/slots/8/PanDA_Pilot-6979592556/log.48313399._000179.job.log.tgz.1 /home/sebastien/BOINC_TEST/BO
[2026-01-22 23:30:04] 2026-01-22 22:29:27,692 | INFO     | adding to output.list: log.48313399._000179.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/dd/log.48313399._000179.job.log.tg
[2026-01-22 23:30:04] 2026-01-22 22:29:27,693 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 23:30:04] 2026-01-22 22:29:27,693 | INFO     | summary of transferred files:
[2026-01-22 23:30:04] 2026-01-22 22:29:27,693 | INFO     |  -- lfn=log.48313399._000179.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 23:30:04] 2026-01-22 22:29:27,693 | INFO     | stage-out finished correctly
[2026-01-22 23:30:04] 2026-01-22 22:29:27,755 | INFO     | number of running child processes to parent process 1845015: 1
[2026-01-22 23:30:04] 2026-01-22 22:29:27,755 | INFO     | maximum number of monitored processes: 6
[2026-01-22 23:30:04] 2026-01-22 22:29:29,477 | INFO     | time since job start (5758s) is within the limit (349056.0s)
[2026-01-22 23:30:04] 2026-01-22 22:29:30,258 | INFO     | monitor loop #433: job 0:6979592556 is in state 'finished'
[2026-01-22 23:30:04] 2026-01-22 22:29:30,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 23:30:04] 2026-01-22 22:29:31,104 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 23:30:04] 2026-01-22 22:29:31,481 | INFO     | time since job start (5760s) is within the limit (349056.0s)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,665 | INFO     | job 6979592556 has state=finished
[2026-01-22 23:30:04] 2026-01-22 22:29:32,665 | INFO     | preparing for final server update for job 6979592556 in state='finished'
[2026-01-22 23:30:04] 2026-01-22 22:29:32,666 | INFO     | reading metadata from: /home/sebastien/BOINC_TEST/BOINC/slots/8/PanDA_Pilot-6979592556/jobReport.json
[2026-01-22 23:30:04] 2026-01-22 22:29:32,671 | INFO     | added worker_node to metadata from /home/sebastien/BOINC_TEST/BOINC/slots/8/workernode_map.json
[2026-01-22 23:30:04] 2026-01-22 22:29:32,671 | INFO     | this job has now completed (state=finished)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,672 | INFO     | log transfer has been attempted: DONE
[2026-01-22 23:30:04] 2026-01-22 22:29:32,672 | INFO     | job 6979592556 has finished - writing final server update
[2026-01-22 23:30:04] 2026-01-22 22:29:32,673 | INFO     | total number of processed events: 400 (read)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,677 | INFO     | using path: /home/sebastien/BOINC_TEST/BOINC/slots/8/PanDA_Pilot-6979592556/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,678 | INFO     | extracted standard info from prmon json
[2026-01-22 23:30:04] 2026-01-22 22:29:32,678 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 23:30:04] 2026-01-22 22:29:32,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 23:30:04] 2026-01-22 22:29:32,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 23:30:04] 2026-01-22 22:29:32,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 23:30:04] 2026-01-22 22:29:32,683 | INFO     | fitting pss+swap vs Time
[2026-01-22 23:30:04] 2026-01-22 22:29:32,684 | INFO     | sum of square deviations: 204163828.0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,684 | INFO     | sum of deviations: -10555183617.000002
[2026-01-22 23:30:04] 2026-01-22 22:29:32,685 | INFO     | mean x: 1769118162.0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,685 | INFO     | mean y: 2669928.252873563
[2026-01-22 23:30:04] 2026-01-22 22:29:32,685 | INFO     | intersect: 91465331179.29268
[2026-01-22 23:30:04] 2026-01-22 22:29:32,685 | INFO     | chi2: 0.15124594469451055
[2026-01-22 23:30:04] 2026-01-22 22:29:32,686 | INFO     | current memory leak: -51.70 B/s (using 87 data points, chi2=0.15)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,686 | INFO     | could have reported an average CPU frequency of 3691 MHz (7 samples)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,687 | INFO     | ..............................
[2026-01-22 23:30:04] 2026-01-22 22:29:32,687 | INFO     | . Timing measurements:
[2026-01-22 23:30:04] 2026-01-22 22:29:32,687 | INFO     | . get job = 0 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,687 | INFO     | . initial setup = 6 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | . payload setup = 6 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | . stage-in = 0 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | . payload execution = 5734 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | . stage-out = 0 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | . log creation = 0 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,688 | INFO     | ..............................
[2026-01-22 23:30:04] 2026-01-22 22:29:32,801 | INFO     | 
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | job summary report
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | --------------------------------------------------
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | PanDA job id: 6979592556
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | task id: 48313399
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | errors: (none)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | pilot state: finished 
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | transexitcode: 0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | exeerrorcode: 0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | exeerrordiag: 
[2026-01-22 23:30:04] 2026-01-22 22:29:32,802 | INFO     | exitcode: 0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | exitmsg: OK
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | cpuconsumptiontime: 42805 s
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | nevents: 400
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | neventsw: 0
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | pid: 1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | pgrp: 1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | corecount: 8
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | event service: False
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | sizes: {0: 2284198, 1: 2284404, 11: 2284432, 5744: 2311234, 5745: 2320268, 5749: 2320324, 5750: 2320646}
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | --------------------------------------------------
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | 
[2026-01-22 23:30:04] 2026-01-22 22:29:32,803 | INFO     | executing command: ls -lF /home/sebastien/BOINC_TEST/BOINC/slots/8
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | job 6979592556 has completed (purged errors)
[2026-01-22 23:30:04] 2026-01-22 22:29:32,819 | INFO     | overall cleanup function is called
[2026-01-22 23:30:04] 2026-01-22 22:29:33,826 | INFO     | --- collectZombieJob: --- 10, [1845015]
[2026-01-22 23:30:04] 2026-01-22 22:29:33,826 | INFO     | zombie collector waiting for pid 1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:33,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 23:30:04] 2026-01-22 22:29:33,826 | INFO     | collected zombie processes
[2026-01-22 23:30:04] 2026-01-22 22:29:33,826 | INFO     | will attempt to kill all subprocesses of pid=1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:33,939 | INFO     | process IDs to be killed: [1845015] (in reverse order)
[2026-01-22 23:30:04] 2026-01-22 22:29:33,969 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 23:30:04] 2026-01-22 22:29:33,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 23:30:04] 2026-01-22 22:29:33,971 | INFO     | did not find any defunct processes belonging to 1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:33,972 | INFO     | did not find any defunct processes belonging to 1845015
[2026-01-22 23:30:04] 2026-01-22 22:29:33,972 | INFO     | ready for new job
[2026-01-22 23:30:04] 2026-01-22 22:29:33,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 23:30:04] 2026-01-22 22:29:33,973 | INFO     | **************************************
[2026-01-22 23:30:04] 2026-01-22 22:29:33,974 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 23:30:04] 2026-01-22 22:29:33,974 | INFO     | **************************************
[2026-01-22 23:30:04] 2026-01-22 22:29:33,974 | INFO     | 
[2026-01-22 23:30:04] 2026-01-22 22:29:33,974 | INFO     | architecture information:
[2026-01-22 23:30:04] 2026-01-22 22:29:33,974 | INFO     | executing command: cat /etc/os-release
[2026-01-22 23:30:04] 2026-01-22 22:29:33,981 | INFO     | cat /etc/os-release:
[2026-01-22 23:30:04] NAME="CentOS Linux"
[2026-01-22 23:30:04] VERSION="7 (Core)"
[2026-01-22 23:30:04] ID="centos"
[2026-01-22 23:30:04] ID_LIKE="rhel fedora"
[2026-01-22 23:30:04] VERSION_ID="7"
[2026-01-22 23:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 23:30:04] ANSI_COLOR="0;31"
[2026-01-22 23:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 23:30:04] HOME_URL="https://www.centos.org/"
[2026-01-22 23:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 23:30:04] 
[2026-01-22 23:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 23:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 23:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 23:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 23:30:04] 
[2026-01-22 23:30:04] 2026-01-22 22:29:33,982 | INFO     | **************************************
[2026-01-22 23:30:04] 2026-01-22 22:29:34,485 | INFO     | executing command: df -mP /home/sebastien/BOINC_TEST/BOINC/slots/8
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | INFO     | sufficient remaining disk space (65544388608 B)
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | INFO     | update_server=False
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 23:30:04] 2026-01-22 22:29:34,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 23:30:04] 2026-01-22 22:29:34,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 23:30:04] 2026-01-22 22:29:34,495 | INFO     | aborting loop
[2026-01-22 23:30:04] 2026-01-22 22:29:34,685 | INFO     | all data control threads have been joined
[2026-01-22 23:30:04] 2026-01-22 22:29:35,410 | INFO     | all payload control threads have been joined
[2026-01-22 23:30:04] 2026-01-22 22:29:35,499 | INFO     | [job] queue monitor thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:35,500 | INFO     | [job] retrieve thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:35,501 | INFO     | [job] job monitor thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:35,672 | INFO     | [payload] failed_post thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:35,691 | INFO     | [data] control thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:35,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 23:30:04] 2026-01-22 22:29:35,858 | INFO     | all job control threads have been joined
[2026-01-22 23:30:04] 2026-01-22 22:29:36,207 | INFO     | [job] validate thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,310 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,415 | INFO     | [payload] control thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,720 | INFO     | [data] copytool_in thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,736 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,864 | INFO     | [job] control thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:36,956 | INFO     | [payload] validate_post thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:37,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 23:30:04] 2026-01-22 22:29:37,752 | INFO     | [data] copytool_out thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:40,297 | INFO     | [monitor] cgroup control has ended
[2026-01-22 23:30:04] 2026-01-22 22:29:41,234 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:44,879 | INFO     | job.realtimelogging is not enabled
[2026-01-22 23:30:04] 2026-01-22 22:29:45,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 23:30:04] 2026-01-22 22:29:47,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708657944384)>', '<ExcThread(monitor, started 139708383643392)>']
[2026-01-22 23:30:04] 2026-01-22 22:29:52,534 | INFO     | all workflow threads have been joined
[2026-01-22 23:30:04] 2026-01-22 22:29:52,534 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 23:30:04] 2026-01-22 22:29:52,535 | INFO     | traces error code: 0
[2026-01-22 23:30:04] 2026-01-22 22:29:52,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 23:30:04] 2026-01-22 22:30:04,717 | INFO     | PID=1840571 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 23:30:04] 2026-01-22 22:30:04,718 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 23:30:04] 2026-01-22 22:30:04,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 23:30:04] 2026-01-22 22:30:04,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 23:30:04] 2026-01-22 22:30:04,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 23:30:04] 2026-01-22 22:30:04,719 | INFO     | [monitor] control thread has ended
[2026-01-22 23:30:04] 2026-01-22 22:30:04,798 [wrapper] ==== pilot stdout END ====
[2026-01-22 23:30:04] 2026-01-22 22:30:04,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 23:30:04] 2026-01-22 22:30:04,801 [wrapper] pilotpid: 1840571
[2026-01-22 23:30:04] 2026-01-22 22:30:04,802 [wrapper] Pilot exit status: 0
[2026-01-22 23:30:04] 2026-01-22 22:30:04,807 [wrapper] pandaids: 6979592556
[2026-01-22 23:30:04] 2026-01-22 22:30:04,819 [wrapper] cleanup supervisor_pilot 1861620 1840572
[2026-01-22 23:30:04] 2026-01-22 22:30:04,820 [wrapper] Test setup, not cleaning
[2026-01-22 23:30:04] 2026-01-22 22:30:04,822 [wrapper] apfmon messages muted
[2026-01-22 23:30:04] 2026-01-22 22:30:04,823 [wrapper] ==== wrapper stdout END ====
[2026-01-22 23:30:04] 2026-01-22 22:30:04,824 [wrapper] ==== wrapper stderr END ====
[2026-01-22 23:30:04]  *** Error codes and diagnostics ***
[2026-01-22 23:30:04]     "exeErrorCode": 0,
[2026-01-22 23:30:04]     "exeErrorDiag": "",
[2026-01-22 23:30:04]     "pilotErrorCode": 0,
[2026-01-22 23:30:04]     "pilotErrorDiag": "",
[2026-01-22 23:30:04]  *** Listing of results directory ***
[2026-01-22 23:30:04] total 550736
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien    584422 22 janv. 11:24 pilot3.tar.gz
[2026-01-22 23:30:04] -rwx------ 1 sebastien sebastien     36322 22 janv. 11:27 runpilot2-wrapper.sh
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien      5111 22 janv. 11:30 queuedata.json
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien       100 22 janv. 21:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 23:30:04] -rwxr-xr-x 1 sebastien sebastien      7986 22 janv. 21:53 run_atlas
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien       105 22 janv. 21:53 job.xml
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien      6676 22 janv. 21:53 init_data.xml
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien 309989759 22 janv. 21:53 EVNT.48313397._000008.pool.root.1
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien     15845 22 janv. 21:53 start_atlas.sh
[2026-01-22 23:30:04] drwxrwx--x 2 sebastien sebastien      4096 22 janv. 21:53 shared
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien    597784 22 janv. 21:53 input.tar.gz
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien         0 22 janv. 21:53 boinc_lockfile
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien      2631 22 janv. 21:53 pandaJob.out
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien   1003905 22 janv. 21:53 agis_schedconf.cvmfs.json
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien   1516246 22 janv. 21:53 agis_ddmendpoints.agis.ALL.json
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien       415 22 janv. 21:53 workernode_map.json
[2026-01-22 23:30:04] drwx------ 5 sebastien sebastien      4096 22 janv. 21:53 pilot3
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien 247605328 22 janv. 23:29 HITS.48313399._000179.pool.root.1
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien       529 22 janv. 23:29 boinc_task_state.xml
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien      1031 22 janv. 23:29 memory_monitor_summary.json
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien    367085 22 janv. 23:29 log.48313399._000179.job.log.tgz.1
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien      6311 22 janv. 23:29 heartbeat.json
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien      8192 22 janv. 23:29 boinc_mmap_file
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien        27 22 janv. 23:29 wrapper_checkpoint.txt
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien        95 22 janv. 23:30 pilot_heartbeat.json
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien       747 22 janv. 23:30 pilotlog.txt
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien    842389 22 janv. 23:30 log.48313399._000179.job.log.1
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien       357 22 janv. 23:30 output.list
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien       620 22 janv. 23:30 runtime_log
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien   1228800 22 janv. 23:30 result.tar.gz
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien      9180 22 janv. 23:30 runtime_log.err
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien       684 22 janv. 23:30 H2IODmz5628nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUM0KDmKFetxn.diag
[2026-01-22 23:30:04] -rw-r--r-- 1 sebastien sebastien     21546 22 janv. 23:30 stderr.txt
[2026-01-22 23:30:04] HITS file was successfully produced:
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien 247605328 22 janv. 23:29 shared/HITS.pool.root.1
[2026-01-22 23:30:04]  *** Contents of shared directory: ***
[2026-01-22 23:30:04] total 546340
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien 309989759 22 janv. 21:53 ATLAS.root_0
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien     15845 22 janv. 21:53 start_atlas.sh
[2026-01-22 23:30:04] -rw-r--r-- 2 sebastien sebastien    597784 22 janv. 21:53 input.tar.gz
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien 247605328 22 janv. 23:29 HITS.pool.root.1
[2026-01-22 23:30:04] -rw------- 1 sebastien sebastien   1228800 22 janv. 23:30 result.tar.gz
23:30:05 (1836237): run_atlas exited; CPU time 42872.101581
23:30:05 (1836237): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN