Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 06:27:15 (21364): vboxwrapper version 26210
2026-01-26 06:27:15 (21364): BOINC client version: 7.16.5
2026-01-26 06:27:16 (21364): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-01-26 06:27:16 (21364): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 06:27:16 (21364): Create VM. (boinc_e71927c7fc58435e, slot#5)
2026-01-26 06:27:17 (21364): Setting Memory Size for VM. (4400MB)
2026-01-26 06:27:17 (21364): Setting CPU Count for VM. (4)
2026-01-26 06:27:17 (21364): Setting Chipset Options for VM.
2026-01-26 06:27:17 (21364): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 06:27:18 (21364): Setting Boot Options for VM.
2026-01-26 06:27:18 (21364): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 06:27:18 (21364): Enabling VM Network Access.
2026-01-26 06:27:19 (21364): Disabling USB Support for VM.
2026-01-26 06:27:19 (21364): Disabling COM Port Support for VM.
2026-01-26 06:27:19 (21364): Disabling LPT Port Support for VM.
2026-01-26 06:27:19 (21364): Disabling Audio Support for VM.
2026-01-26 06:27:20 (21364): Disabling Clipboard Support for VM.
2026-01-26 06:27:20 (21364): Disabling Drag and Drop Support for VM.
2026-01-26 06:27:20 (21364): Adding storage controller(s) to VM.
2026-01-26 06:27:20 (21364): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 06:27:21 (21364): Adding VirtualBox Guest Additions to VM.
2026-01-26 06:27:21 (21364): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 06:27:21 (21364): forwarding host port 49644 to guest port 80
2026-01-26 06:27:22 (21364): Enabling remote desktop for VM.
2026-01-26 06:27:22 (21364): Enabling shared directory for VM.
2026-01-26 06:27:23 (21364): Starting VM using VBoxManage interface. (boinc_e71927c7fc58435e, slot#5)
2026-01-26 06:27:27 (21364): Successfully started VM. (PID = '7980')
2026-01-26 06:27:27 (21364): Reporting VM Process ID to BOINC.
2026-01-26 06:27:27 (21364): Guest Log: BIOS: VirtualBox 5.2.44
2026-01-26 06:27:27 (21364): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 06:27:27 (21364): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 06:27:27 (21364): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 06:27:27 (21364): Detected: Web Application Enabled (http://localhost:49644)
2026-01-26 06:27:27 (21364): Detected: Remote Desktop Enabled (localhost:49645)
2026-01-26 06:27:27 (21364): Preference change detected
2026-01-26 06:27:27 (21364): Setting CPU throttle for VM. (100%)
2026-01-26 06:27:27 (21364): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 06:27:29 (21364): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 06:27:29 (21364): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 06:27:32 (21364): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 06:27:32 (21364): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 06:27:32 (21364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 06:27:37 (21364): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 06:27:37 (21364): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-26 06:27:43 (21364): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000262 main     Log opened 2026-01-26T06:27:41.585631000Z
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000381 main     OS Product: Linux
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000415 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000442 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000476 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000477 main     Process ID: 1305
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.000478 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 06:27:43 (21364): Guest Log: 00:00:00.001417 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 06:27:43 (21364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 06:27:43 (21364): Guest Log: [INFO] Mounting shared directory
2026-01-26 06:27:43 (21364): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 06:27:53 (21364): Guest Log: 00:00:10.004475 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 879 302 000ns (GuestNow=1 769 401 672 709 252 000 ns GuestLast=1 769 408 861 588 554 000 ns fSetTimeLastLoop=true )
2026-01-26 06:28:07 (21364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 06:28:07 (21364): Guest Log: [INFO] Detected branch: prod
2026-01-26 06:28:07 (21364): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 06:28:07 (21364): Guest Log: Copying input files
2026-01-26 06:28:09 (21364): Guest Log: Copied input files into RunAtlas.
2026-01-26 06:28:09 (21364): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 06:28:09 (21364): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 06:28:09 (21364): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 06:28:09 (21364): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 06:29:03 (21364): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 06:29:03 (21364): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 06:29:03 (21364): Guest Log: 2.6.3.0 1601 0 32192 155532 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 06:29:04 (21364): Guest Log: copied the webapp to /var/www
2026-01-26 06:29:04 (21364): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-26 06:29:04 (21364): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-26 06:29:04 (21364): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 06:29:04 (21364): Guest Log:  *** Starting ATLAS job. (PandaID=6979585293 taskID=48312954) ***
2026-01-26 08:07:30 (21364): Status Report: Elapsed Time: '6000.000000'
2026-01-26 08:07:30 (21364): Status Report: CPU Time: '21851.265625'
2026-01-26 09:00:02 (21364): VM state change detected. (old = 'running', new = 'paused')
2026-01-26 11:00:02 (21364): VM state change detected. (old = 'paused', new = 'running')
2026-01-26 11:00:05 (21364): Guest Log: 02:32:21.947321 timesync vgsvcTimeSyncWorker: Radical host time change: 7 210 096 000 000ns (HostNow=1 769 418 004 748 000 000 ns HostLast=1 769 410 794 652 000 000 ns)
2026-01-26 11:00:15 (21364): Guest Log: 02:32:31.955105 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 210 103 873 000ns (GuestNow=1 769 418 014 755 895 000 ns GuestLast=1 769 410 804 652 022 000 ns fSetTimeLastLoop=true )
2026-01-26 11:47:35 (21364): Status Report: Elapsed Time: '12000.000000'
2026-01-26 11:47:35 (21364): Status Report: CPU Time: '45302.109375'
2026-01-26 12:33:18 (21364): Guest Log:  *** Job finished ***
2026-01-26 12:33:18 (21364): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:32:14,578 | INFO     | [data] copytool_out thread has finished
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:32:15,638 | INFO     | [data] queue_monitor thread has finished
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:09,965 | INFO     | [monitor] cgroup control has ended
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:11,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329326413632)>', '<ExcThread(monitor, started 140329013450496)>']
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:12,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:12,090 | INFO     | [monitor] control thread has ended
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,498 | INFO     | all workflow threads have been joined
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,499 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,499 | INFO     | traces error code: 0
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,610 [wrapper] ==== pilot stdout END ====
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,616 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,621 [wrapper] pilotpid: 5994
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,626 [wrapper] Pilot exit status: 0
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,675 [wrapper] pandaids: 6979585293
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,716 [wrapper] cleanup supervisor_pilot 28119 5995
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,722 [wrapper] Test setup, not cleaning
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,728 [wrapper] apfmon messages muted
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,735 [wrapper] ==== wrapper stdout END ====
2026-01-26 12:33:18 (21364): Guest Log: 2026-01-26 10:33:16,740 [wrapper] ==== wrapper stderr END ====
2026-01-26 12:33:18 (21364): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 12:33:18 (21364): Guest Log:     "exeErrorCode": 0,
2026-01-26 12:33:18 (21364): Guest Log:     "exeErrorDiag": "",
2026-01-26 12:33:18 (21364): Guest Log:     "pilotErrorCode": 0,
2026-01-26 12:33:18 (21364): Guest Log:     "pilotErrorDiag": "",
2026-01-26 12:33:18 (21364): Guest Log:  *** Listing of results directory ***
2026-01-26 12:33:18 (21364): Guest Log: total 257772
2026-01-26 12:33:18 (21364): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 22 10:24 pilot3.tar.gz
2026-01-26 12:33:18 (21364): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 22 10:24 runpilot2-wrapper.sh
2026-01-26 12:33:18 (21364): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 22 10:24 queuedata.json
2026-01-26 12:33:18 (21364): Guest Log: -rwxr-xr-x. 1 atlas atlas      9037 Jan 26 04:28 init_data.xml
2026-01-26 12:33:18 (21364): Guest Log: -rwxr-xr-x. 1 atlas atlas    597759 Jan 26 04:28 input.tar.gz
2026-01-26 12:33:18 (21364): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 04:28 start_atlas.sh
2026-01-26 12:33:18 (21364): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 04:28 EVNT.48312952._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 12:33:18 (21364): Guest Log: -rw-r--r--. 1 atlas atlas      2602 Jan 26 04:29 pandaJob.out
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 26 04:29 agis_schedconf.cvmfs.json
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas       428 Jan 26 04:29 workernode_map.json
2026-01-26 12:33:18 (21364): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 04:29 pilot3
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas 255168650 Jan 26 10:31 HITS.48312954._000241.pool.root.1
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas        97 Jan 26 10:31 pilot_heartbeat.json
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas      1032 Jan 26 10:32 memory_monitor_summary.json
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 10:32 agis_ddmendpoints.agis.ALL.json
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas    428007 Jan 26 10:32 log.48312954._000241.job.log.tgz.1
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas      6353 Jan 26 10:32 heartbeat.json
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas      4608 Jan 26 10:33 pilotlog.txt
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas   2029751 Jan 26 10:33 log.48312954._000241.job.log.1
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 10:33 output.list
2026-01-26 12:33:18 (21364): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 10:33 runtime_log
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas   2478080 Jan 26 10:33 result.tar.gz
2026-01-26 12:33:18 (21364): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Jan 26 10:33 runtime_log.err
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas       670 Jan 26 10:33 3KtMDmN2628nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvC0KDmqRd1qn.diag
2026-01-26 12:33:18 (21364): Guest Log: Looking for outputfile HITS.48312954._000241.pool.root.1
2026-01-26 12:33:18 (21364): Guest Log: HITS file was successfully produced
2026-01-26 12:33:18 (21364): Guest Log: -rw-------. 1 atlas atlas 255168650 Jan 26 10:31 /home/atlas/RunAtlas/HITS.48312954._000241.pool.root.1
2026-01-26 12:33:19 (21364): Guest Log: Successfully finished the ATLAS job!
2026-01-26 12:33:19 (21364): Guest Log: Copying the results back to the shared directory!
2026-01-26 12:33:19 (21364): Guest Log:  *** Contents of shared directory: ***
2026-01-26 12:33:19 (21364): Guest Log: total 559844
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root 314999965 Jan 26 04:27 ATLAS.root_0
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root 255168650 Jan 26 10:33 HITS.pool.root.1
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root      9037 Jan 26 04:27 init_data.xml
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root    597759 Jan 22 19:16 input.tar.gz
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root   2478080 Jan 26 10:33 result.tar.gz
2026-01-26 12:33:19 (21364): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 22 19:16 start_atlas.sh
2026-01-26 12:33:19 (21364): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 12:33:19 (21364): VM Completion File Detected.
2026-01-26 12:33:19 (21364): Powering off VM.
2026-01-26 12:33:19 (21364): Successfully stopped VM.
2026-01-26 12:33:19 (21364): Deregistering VM. (boinc_e71927c7fc58435e, slot#5)
2026-01-26 12:33:19 (21364): Removing network bandwidth throttle group from VM.
2026-01-26 12:33:20 (21364): Removing VM from VirtualBox.
2026-01-26 12:33:25 (21364): called boinc_finish(0)

</stderr_txt>
]]>

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