Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:27:44 (70777): wrapper (7.7.26015): starting
15:27:44 (70777): wrapper: running run_atlas (--nthreads 8)
[2026-01-22 15:27:44] Arguments: --nthreads 8
[2026-01-22 15:27:44] Threads: 8
[2026-01-22 15:27:44] Checking for CVMFS
[2026-01-22 15:27:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 15:27:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 15:27:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 15:27:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 15:27:47] 2.13.3.0 11035 15079 351624 155406 3 425 25662023 32935936 65784 16776704 0 152296593 99.816 68469744 28666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-22 15:27:47] CVMFS is ok
[2026-01-22 15:27:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 15:27:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 15:27:47] Further information can be found at the LHC@home message board.
[2026-01-22 15:27:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 15:27:47] Checking for apptainer binary...
[2026-01-22 15:27:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 15:27:47] Running /usr/bin/apptainer --version
[2026-01-22 15:27:47] apptainer version 1.4.5-2.el9
[2026-01-22 15:27:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 15:27:47] lc-10-9.aglt2.org
[2026-01-22 15:27:47] apptainer works
[2026-01-22 15:27:47] Set ATHENA_PROC_NUMBER=8
[2026-01-22 15:27:47] Set ATHENA_CORE_NUMBER=8
[2026-01-22 15:27:48] Starting ATLAS job with PandaID=6978788156
[2026-01-22 15:27:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 05:03:20]  *** The last 200 lines of the pilot log: ***
[2026-01-23 05:03:20] 2026-01-23 10:02:00,866 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6978788156/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 05:03:20] 2026-01-23 10:02:00,868 | INFO     | extracted standard info from prmon json
[2026-01-23 05:03:20] 2026-01-23 10:02:00,868 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 05:03:20] 2026-01-23 10:02:00,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 05:03:20] 2026-01-23 10:02:00,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 05:03:20] 2026-01-23 10:02:00,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 05:03:20] 2026-01-23 10:02:01,045 | INFO     | fitting pss+swap vs Time
[2026-01-23 05:03:20] 2026-01-23 10:02:01,046 | INFO     | sum of square deviations: 157574744448.61276
[2026-01-23 05:03:20] 2026-01-23 10:02:01,171 | INFO     | sum of deviations: 311757694714.0422
[2026-01-23 05:03:20] 2026-01-23 10:02:01,171 | INFO     | mean x: 1769138187.7030075
[2026-01-23 05:03:20] 2026-01-23 10:02:01,171 | INFO     | mean y: 2572620.27443609
[2026-01-23 05:03:20] 2026-01-23 10:02:01,171 | INFO     | intersect: -3497623080.241096
[2026-01-23 05:03:20] 2026-01-23 10:02:01,172 | INFO     | chi2: 4.9315502954363035
[2026-01-23 05:03:20] 2026-01-23 10:02:01,183 | INFO     | sum of square deviations: 154631380530.9056
[2026-01-23 05:03:20] 2026-01-23 10:02:01,327 | INFO     | sum of deviations: 411199290287.6973
[2026-01-23 05:03:20] 2026-01-23 10:02:01,354 | INFO     | mean x: 1769138035.2042875
[2026-01-23 05:03:20] 2026-01-23 10:02:01,354 | INFO     | mean y: 2577751.8537200503
[2026-01-23 05:03:20] 2026-01-23 10:02:01,355 | INFO     | intersect: -4701954420.072262
[2026-01-23 05:03:20] 2026-01-23 10:02:01,356 | INFO     | chi2: 3.563618744291628
[2026-01-23 05:03:20] 2026-01-23 10:02:01,356 | INFO     | current chi2=3.563618744291628 (change=27.73836763685794 %)
[2026-01-23 05:03:20] 2026-01-23 10:02:01,357 | INFO     | sum of square deviations: 151724901025.69556
[2026-01-23 05:03:20] 2026-01-23 10:02:01,541 | INFO     | monitor loop #2083: job 0:6978788156 is in state 'finished'
[2026-01-23 05:03:20] 2026-01-23 10:02:01,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 05:03:20] 2026-01-23 10:02:01,587 | INFO     | sum of deviations: 405906343927.7971
[2026-01-23 05:03:20] 2026-01-23 10:02:01,587 | INFO     | mean x: 1769137882.7055838
[2026-01-23 05:03:20] 2026-01-23 10:02:01,588 | INFO     | mean y: 2577474.1370558375
[2026-01-23 05:03:20] 2026-01-23 10:02:01,588 | INFO     | intersect: -4730358813.9648695
[2026-01-23 05:03:20] 2026-01-23 10:02:01,589 | INFO     | chi2: 3.5639832750260045
[2026-01-23 05:03:20] 2026-01-23 10:02:01,589 | INFO     | current chi2=3.5639832750260045 (change=-0.01022922934617017 %)
[2026-01-23 05:03:20] 2026-01-23 10:02:01,589 | INFO     | right removable region: 787
[2026-01-23 05:03:20] 2026-01-23 10:02:01,590 | INFO     | sum of square deviations: 154631281710.9057
[2026-01-23 05:03:20] 2026-01-23 10:02:02,253 | INFO     | sum of deviations: 78362031298.84113
[2026-01-23 05:03:20] 2026-01-23 10:02:02,253 | INFO     | mean x: 1769138340.2042875
[2026-01-23 05:03:20] 2026-01-23 10:02:02,277 | INFO     | mean y: 2584703.2232030267
[2026-01-23 05:03:20] 2026-01-23 10:02:02,277 | INFO     | intersect: -893956232.4346484
[2026-01-23 05:03:20] 2026-01-23 10:02:02,278 | INFO     | chi2: 1.9854540231473203
[2026-01-23 05:03:20] 2026-01-23 10:02:02,278 | INFO     | current chi2=1.9854540231473203 (change=59.739759219637776 %)
[2026-01-23 05:03:20] 2026-01-23 10:02:02,279 | INFO     | sum of square deviations: 151724703385.69547
[2026-01-23 05:03:20] 2026-01-23 10:02:02,571 | INFO     | sum of deviations: 2404278585.233536
[2026-01-23 05:03:20] 2026-01-23 10:02:02,571 | INFO     | mean x: 1769138492.7055838
[2026-01-23 05:03:20] 2026-01-23 10:02:02,571 | INFO     | mean y: 2588683.992385787
[2026-01-23 05:03:20] 2026-01-23 10:02:02,572 | INFO     | intersect: -25445655.158778366
[2026-01-23 05:03:20] 2026-01-23 10:02:02,573 | INFO     | chi2: 1.6568611435770064
[2026-01-23 05:03:20] 2026-01-23 10:02:02,573 | INFO     | current chi2=1.6568611435770064 (change=16.550012024425126 %)
[2026-01-23 05:03:20] 2026-01-23 10:02:02,573 | INFO     | left removable region: 20
[2026-01-23 05:03:20] 2026-01-23 10:02:02,594 | INFO     | sum of square deviations: 139915153337.67682
[2026-01-23 05:03:20] 2026-01-23 10:02:02,662 | INFO     | sum of deviations: 66449020992.71325
[2026-01-23 05:03:20] 2026-01-23 10:02:02,662 | INFO     | mean x: 1769138462.202086
[2026-01-23 05:03:20] 2026-01-23 10:02:02,663 | INFO     | mean y: 2595528.679269883
[2026-01-23 05:03:20] 2026-01-23 10:02:02,663 | INFO     | intersect: -837610238.9559542
[2026-01-23 05:03:20] 2026-01-23 10:02:02,664 | INFO     | chi2: 0.2245388613700618
[2026-01-23 05:03:20] 2026-01-23 10:02:02,664 | INFO     | current memory leak: 0.47 B/s (using 767 data points, chi2=0.22)
[2026-01-23 05:03:20] 2026-01-23 10:02:02,665 | INFO     | could have reported an average CPU frequency of 2707 MHz (30 samples)
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | ..............................
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . Timing measurements:
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . get job = 0 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . initial setup = 37 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . payload setup = 47 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . stage-in = 0 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . payload execution = 48660 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . stage-out = 11 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | . log creation = 2 s
[2026-01-23 05:03:20] 2026-01-23 10:02:02,678 | INFO     | ..............................
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | 
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | job summary report
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | --------------------------------------------------
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | PanDA job id: 6978788156
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | task id: 48313408
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | errors: (none)
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | pilot state: finished 
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | transexitcode: 0
[2026-01-23 05:03:20] 2026-01-23 10:02:04,984 | INFO     | exeerrorcode: 0
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | exeerrordiag: 
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | exitcode: 0
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | exitmsg: OK
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | cpuconsumptiontime: 72484 s
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | nevents: 400
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | neventsw: 0
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | pid: 98216
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | pgrp: 98216
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | corecount: 8
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | event service: False
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | sizes: {0: 2283297, 1: 2283898, 2: 2284010, 3: 2284095, 4: 2284471, 15: 2284499, 48712: 2329367, 48713: 2329366, 48725: 2338420, 48726: 2338476, 48732: 2338670}
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | --------------------------------------------------
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | 
[2026-01-23 05:03:20] 2026-01-23 10:02:04,985 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 05:03:20] 2026-01-23 10:02:05,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,170 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,170 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 05:03:20] 2026-01-23 10:02:05,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 05:03:20] 2026-01-23 10:02:05,172 | INFO     | job 6978788156 has completed (purged errors)
[2026-01-23 05:03:20] 2026-01-23 10:02:05,172 | INFO     | overall cleanup function is called
[2026-01-23 05:03:20] 2026-01-23 10:02:06,321 | INFO     | --- collectZombieJob: --- 10, [98216]
[2026-01-23 05:03:20] 2026-01-23 10:02:06,322 | INFO     | zombie collector waiting for pid 98216
[2026-01-23 05:03:20] 2026-01-23 10:02:06,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 05:03:20] 2026-01-23 10:02:06,322 | INFO     | collected zombie processes
[2026-01-23 05:03:20] 2026-01-23 10:02:06,322 | INFO     | will attempt to kill all subprocesses of pid=98216
[2026-01-23 05:03:20] 2026-01-23 10:02:08,921 | INFO     | PID=81129 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 05:03:20] 2026-01-23 10:02:08,921 | INFO     | .. there are 97 such processes running
[2026-01-23 05:03:20] 2026-01-23 10:02:14,504 | INFO     | process IDs to be killed: [98216] (in reverse order)
[2026-01-23 05:03:20] 2026-01-23 10:02:15,289 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 05:03:20] 2026-01-23 10:02:15,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 05:03:20] 2026-01-23 10:02:15,352 | INFO     | did not find any defunct processes belonging to 98216
[2026-01-23 05:03:20] 2026-01-23 10:02:15,417 | INFO     | did not find any defunct processes belonging to 98216
[2026-01-23 05:03:20] 2026-01-23 10:02:15,417 | INFO     | ready for new job
[2026-01-23 05:03:20] 2026-01-23 10:02:15,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 05:03:20] 2026-01-23 10:02:15,422 | INFO     | **************************************
[2026-01-23 05:03:20] 2026-01-23 10:02:15,422 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 05:03:20] 2026-01-23 10:02:15,422 | INFO     | **************************************
[2026-01-23 05:03:20] 2026-01-23 10:02:15,422 | INFO     | 
[2026-01-23 05:03:20] 2026-01-23 10:02:15,436 | INFO     | architecture information:
[2026-01-23 05:03:20] 2026-01-23 10:02:15,440 | INFO     | executing command: cat /etc/os-release
[2026-01-23 05:03:20] 2026-01-23 10:02:15,553 | INFO     | cat /etc/os-release:
[2026-01-23 05:03:20] NAME="CentOS Linux"
[2026-01-23 05:03:20] VERSION="7 (Core)"
[2026-01-23 05:03:20] ID="centos"
[2026-01-23 05:03:20] ID_LIKE="rhel fedora"
[2026-01-23 05:03:20] VERSION_ID="7"
[2026-01-23 05:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 05:03:20] ANSI_COLOR="0;31"
[2026-01-23 05:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 05:03:20] HOME_URL="https://www.centos.org/"
[2026-01-23 05:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 05:03:20] 
[2026-01-23 05:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 05:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 05:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 05:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 05:03:20] 
[2026-01-23 05:03:20] 2026-01-23 10:02:15,553 | INFO     | **************************************
[2026-01-23 05:03:20] 2026-01-23 10:02:16,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 05:03:20] 2026-01-23 10:02:16,261 | INFO     | sufficient remaining disk space (87583358976 B)
[2026-01-23 05:03:20] 2026-01-23 10:02:16,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 05:03:20] 2026-01-23 10:02:16,261 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 05:03:20] 2026-01-23 10:02:16,261 | INFO     | update_server=False
[2026-01-23 05:03:20] 2026-01-23 10:02:16,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 05:03:20] 2026-01-23 10:02:16,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 05:03:20] 2026-01-23 10:02:16,266 | INFO     | aborting loop
[2026-01-23 05:03:20] 2026-01-23 10:02:16,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 05:03:20] 2026-01-23 10:02:16,859 | INFO     | all job control threads have been joined
[2026-01-23 05:03:20] 2026-01-23 10:02:16,983 | INFO     | all data control threads have been joined
[2026-01-23 05:03:20] 2026-01-23 10:02:17,268 | INFO     | [job] retrieve thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:17,272 | INFO     | [job] job monitor thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:17,842 | INFO     | all payload control threads have been joined
[2026-01-23 05:03:20] 2026-01-23 10:02:17,866 | INFO     | [job] control thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:17,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 05:03:20] 2026-01-23 10:02:17,993 | INFO     | [data] control thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:17,993 | INFO     | [job] validate thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:17,993 | INFO     | [data] copytool_in thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,015 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,372 | INFO     | [data] copytool_out thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,516 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,803 | INFO     | [payload] validate_post thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 05:03:20] 2026-01-23 10:02:18,871 | INFO     | [payload] control thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,872 | INFO     | [payload] failed_post thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:18,964 | INFO     | [job] queue monitor thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:22,825 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 05:03:20] 2026-01-23 10:02:53,226 | INFO     | PID=81129 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 05:03:20] 2026-01-23 10:02:53,226 | INFO     | .. there are 97 such processes running
[2026-01-23 05:03:20] 2026-01-23 10:02:53,226 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 05:03:20] 2026-01-23 10:02:53,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 05:03:20] 2026-01-23 10:02:53,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 05:03:20] 2026-01-23 10:03:10,703 | INFO     | [monitor] cgroup control has ended
[2026-01-23 05:03:20] 2026-01-23 10:03:11,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234700805952)>', '<ExcThread(monitor, started 140234171873024)>']
[2026-01-23 05:03:20] 2026-01-23 10:03:12,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 05:03:20] 2026-01-23 10:03:12,411 | INFO     | [monitor] control thread has ended
[2026-01-23 05:03:20] 2026-01-23 10:03:16,561 | INFO     | all workflow threads have been joined
[2026-01-23 05:03:20] 2026-01-23 10:03:16,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 05:03:20] 2026-01-23 10:03:16,562 | INFO     | traces error code: 0
[2026-01-23 05:03:20] 2026-01-23 10:03:16,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 05:03:20] 2026-01-23 10:03:17,800 [wrapper] ==== pilot stdout END ====
[2026-01-23 05:03:20] 2026-01-23 10:03:17,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 05:03:20] 2026-01-23 10:03:17,843 [wrapper] pilotpid: 81129
[2026-01-23 05:03:20] 2026-01-23 10:03:17,898 [wrapper] Pilot exit status: 0
[2026-01-23 05:03:20] 2026-01-23 10:03:18,090 [wrapper] pandaids: 6978788156
[2026-01-23 05:03:20] 2026-01-23 10:03:19,080 [wrapper] cleanup supervisor_pilot 1317161 81130
[2026-01-23 05:03:20] 2026-01-23 10:03:19,108 [wrapper] Test setup, not cleaning
[2026-01-23 05:03:20] 2026-01-23 10:03:19,196 [wrapper] apfmon messages muted
[2026-01-23 05:03:20] 2026-01-23 10:03:19,253 [wrapper] ==== wrapper stdout END ====
[2026-01-23 05:03:20] 2026-01-23 10:03:19,291 [wrapper] ==== wrapper stderr END ====
[2026-01-23 05:03:20]  *** Error codes and diagnostics ***
[2026-01-23 05:03:20]     "exeErrorCode": 0,
[2026-01-23 05:03:20]     "exeErrorDiag": "",
[2026-01-23 05:03:20]     "pilotErrorCode": 0,
[2026-01-23 05:03:20]     "pilotErrorDiag": "",
[2026-01-23 05:03:20]  *** Listing of results directory ***
[2026-01-23 05:03:20] total 650120
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas    584422 Jan 21 16:48 pilot3.tar.gz
[2026-01-23 05:03:20] -rwx------. 1 boincer umatlas     36322 Jan 21 16:52 runpilot2-wrapper.sh
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas      5111 Jan 21 16:53 queuedata.json
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas       100 Jan 22 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 05:03:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 22 15:27 run_atlas
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas       105 Jan 22 15:27 job.xml
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas 322409261 Jan 22 15:27 EVNT.48313406._000012.pool.root.1
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 15:27 start_atlas.sh
[2026-01-23 05:03:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 22 15:27 shared
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas    597780 Jan 22 15:27 input.tar.gz
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas         0 Jan 22 15:27 boinc_lockfile
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas      2629 Jan 22 15:27 pandaJob.out
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas        57 Jan 22 15:27 setup.sh.local
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas   1002389 Jan 22 15:28 agis_schedconf.cvmfs.json
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas       440 Jan 22 15:29 workernode_map.json
[2026-01-23 05:03:20] drwx------. 5 boincer umatlas      4096 Jan 22 15:29 pilot3
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas      6866 Jan 23 04:58 init_data.xml
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas 328020549 Jan 23 04:59 HITS.48313408._000193.pool.root.1
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas       531 Jan 23 04:59 boinc_task_state.xml
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas      1045 Jan 23 05:01 memory_monitor_summary.json
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas   1516246 Jan 23 05:01 agis_ddmendpoints.agis.ALL.json
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas    830942 Jan 23 05:01 log.48313408._000193.job.log.tgz.1
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas      6385 Jan 23 05:02 heartbeat.json
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas        95 Jan 23 05:02 pilot_heartbeat.json
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas      4818 Jan 23 05:03 pilotlog.txt
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas   4842615 Jan 23 05:03 log.48313408._000193.job.log.1
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas        28 Jan 23 05:03 wrapper_checkpoint.txt
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas       357 Jan 23 05:03 output.list
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas       620 Jan 23 05:03 runtime_log
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas   5693440 Jan 23 05:03 result.tar.gz
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas      9337 Jan 23 05:03 runtime_log.err
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas       658 Jan 23 05:03 jheMDmWIv28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgMzKDmb9K94m.diag
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 05:03 boinc_mmap_file
[2026-01-23 05:03:20] -rw-r--r--. 1 boincer umatlas     21303 Jan 23 05:03 stderr.txt
[2026-01-23 05:03:20] HITS file was successfully produced:
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas 328020549 Jan 23 04:59 shared/HITS.pool.root.1
[2026-01-23 05:03:20]  *** Contents of shared directory: ***
[2026-01-23 05:03:20] total 641360
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas 322409261 Jan 22 15:27 ATLAS.root_0
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 15:27 start_atlas.sh
[2026-01-23 05:03:20] -rw-r--r--. 2 boincer umatlas    597780 Jan 22 15:27 input.tar.gz
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas 328020549 Jan 23 04:59 HITS.pool.root.1
[2026-01-23 05:03:20] -rw-------. 1 boincer umatlas   5693440 Jan 23 05:03 result.tar.gz
05:03:21 (70777): run_atlas exited; CPU time 75822.530276
05:03:21 (70777): called boinc_finish(0)

</stderr_txt>
]]>

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