Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:53:16 (1581038): wrapper (7.7.26015): starting
17:53:16 (1581038): wrapper: running run_atlas (--nthreads 12)
[2026-01-22 17:53:16] Arguments: --nthreads 12
[2026-01-22 17:53:16] Threads: 12
[2026-01-22 17:53:16] Checking for CVMFS
[2026-01-22 17:53:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 17:53:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 17:53:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 17:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 17:53:20] 2.11.0.0 1720695 1137 85524 155402 0 188 5368814 6144000 12402 130560 0 10213670 100.000 13810 44 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-22 17:53:20] CVMFS is ok
[2026-01-22 17:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 17:53:20] Checking for apptainer binary...
[2026-01-22 17:53:20] apptainer is not installed, using version from CVMFS
[2026-01-22 17:53:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 17:53:20] radiat0r
[2026-01-22 17:53:20] apptainer works
[2026-01-22 17:53:20] Set ATHENA_PROC_NUMBER=12
[2026-01-22 17:53:20] Set ATHENA_CORE_NUMBER=12
[2026-01-22 17:53:20] Starting ATLAS job with PandaID=6979137755
[2026-01-22 17:53:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 19:22:15]  *** The last 200 lines of the pilot log: ***
[2026-01-22 19:22:15]  is_altstaged=None
[2026-01-22 19:22:15]  is_tar=False
[2026-01-22 19:22:15]  lfn=log.48313004._000351.job.log.tgz.1
[2026-01-22 19:22:15]  mtime=0
[2026-01-22 19:22:15]  protocol_id=None
[2026-01-22 19:22:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 19:22:15]  replicas=None
[2026-01-22 19:22:15]  scope=mc23_13p6TeV
[2026-01-22 19:22:15]  status=None
[2026-01-22 19:22:15]  status_code=0
[2026-01-22 19:22:15]  storage_token=
[2026-01-22 19:22:15]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6979137755/log.48313004._000351.job.log.tgz.1
[2026-01-22 19:22:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/3e/log.48313004._000351.job.log.tgz.1
[2026-01-22 19:22:15]  workdir=None
[2026-01-22 19:22:15] ]
[2026-01-22 19:22:15] 2026-01-22 19:21:40,880 | INFO     | transferring file log.48313004._000351.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6979137755/log.48313004._000351.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-22 19:22:15] 2026-01-22 19:21:40,880 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6979137755/log.48313004._000351.job.log.tgz.1 /var/lib/boinc/slots/19/log.48313004._000351.j
[2026-01-22 19:22:15] 2026-01-22 19:21:40,910 | INFO     | adding to output.list: log.48313004._000351.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/3e/log.48313004._000351.job.log.tg
[2026-01-22 19:22:15] 2026-01-22 19:21:40,911 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 19:22:15] 2026-01-22 19:21:40,911 | INFO     | summary of transferred files:
[2026-01-22 19:22:15] 2026-01-22 19:21:40,911 | INFO     |  -- lfn=log.48313004._000351.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 19:22:15] 2026-01-22 19:21:40,911 | INFO     | stage-out finished correctly
[2026-01-22 19:22:15] 2026-01-22 19:21:41,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 19:22:15] 2026-01-22 19:21:42,213 | INFO     | PID=1586098 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-22 19:22:15] 2026-01-22 19:21:42,213 | INFO     | .. there are 15 such processes running
[2026-01-22 19:22:15] 2026-01-22 19:21:42,972 | INFO     | job 6979137755 has state=finished
[2026-01-22 19:22:15] 2026-01-22 19:21:42,972 | INFO     | preparing for final server update for job 6979137755 in state='finished'
[2026-01-22 19:22:15] 2026-01-22 19:21:42,972 | INFO     | reading metadata from: /var/lib/boinc/slots/19/PanDA_Pilot-6979137755/jobReport.json
[2026-01-22 19:22:15] 2026-01-22 19:21:42,975 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/19/workernode_map.json
[2026-01-22 19:22:15] 2026-01-22 19:21:42,976 | INFO     | this job has now completed (state=finished)
[2026-01-22 19:22:15] 2026-01-22 19:21:42,976 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 19:22:15] 2026-01-22 19:21:42,976 | INFO     | log transfer has been attempted: DONE
[2026-01-22 19:22:15] 2026-01-22 19:21:42,976 | INFO     | job 6979137755 has finished - writing final server update
[2026-01-22 19:22:15] 2026-01-22 19:21:42,976 | INFO     | total number of processed events: 400 (read)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,050 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6979137755/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,051 | INFO     | extracted standard info from prmon json
[2026-01-22 19:22:15] 2026-01-22 19:21:43,051 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 19:22:15] 2026-01-22 19:21:43,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 19:22:15] 2026-01-22 19:21:43,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 19:22:15] 2026-01-22 19:21:43,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 19:22:15] 2026-01-22 19:21:43,054 | INFO     | fitting pss+swap vs Time
[2026-01-22 19:22:15] 2026-01-22 19:21:43,054 | INFO     | sum of square deviations: 152858680.0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,054 | INFO     | sum of deviations: 3445721334.9999995
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | mean x: 1769107135.0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | mean y: 2799618.7848101268
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | intersect: -39876193180.12084
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | chi2: 0.002931631016449232
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | current memory leak: 22.54 B/s (using 79 data points, chi2=0.00)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,055 | INFO     | could have reported an average CPU frequency of 2413 MHz (6 samples)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | ..............................
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . Timing measurements:
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . get job = 0 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . initial setup = 9 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . payload setup = 7 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . stage-in = 0 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . payload execution = 5250 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . stage-out = 1 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,056 | INFO     | . log creation = 0 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,057 | INFO     | ..............................
[2026-01-22 19:22:15] 2026-01-22 19:21:43,154 | INFO     | 
[2026-01-22 19:22:15] 2026-01-22 19:21:43,154 | INFO     | job summary report
[2026-01-22 19:22:15] 2026-01-22 19:21:43,154 | INFO     | --------------------------------------------------
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | PanDA job id: 6979137755
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | task id: 48313004
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | errors: (none)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | pilot state: finished 
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | transexitcode: 0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | exeerrorcode: 0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | exeerrordiag: 
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | exitcode: 0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | exitmsg: OK
[2026-01-22 19:22:15] 2026-01-22 19:21:43,155 | INFO     | cpuconsumptiontime: 58460 s
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | nevents: 400
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | neventsw: 0
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | pid: 1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | pgrp: 1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | corecount: 12
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | event service: False
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | sizes: {0: 2283295, 1: 2284414, 12: 2284414, 5262: 2311197, 5264: 2320253, 5266: 2320391}
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | --------------------------------------------------
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | 
[2026-01-22 19:22:15] 2026-01-22 19:21:43,156 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-01-22 19:22:15] 2026-01-22 19:21:43,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,202 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 19:22:15] 2026-01-22 19:21:43,202 | INFO     | job 6979137755 has completed (purged errors)
[2026-01-22 19:22:15] 2026-01-22 19:21:43,202 | INFO     | overall cleanup function is called
[2026-01-22 19:22:15] 2026-01-22 19:21:44,061 | WARNING  | process 1591782 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 19:22:15] 2026-01-22 19:21:44,215 | INFO     | --- collectZombieJob: --- 10, [1591782]
[2026-01-22 19:22:15] 2026-01-22 19:21:44,216 | INFO     | zombie collector waiting for pid 1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:44,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 19:22:15] 2026-01-22 19:21:44,217 | INFO     | collected zombie processes
[2026-01-22 19:22:15] 2026-01-22 19:21:44,217 | INFO     | will attempt to kill all subprocesses of pid=1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:45,524 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 19:22:15] 2026-01-22 19:21:46,107 | INFO     | process IDs to be killed: [1591782] (in reverse order)
[2026-01-22 19:22:15] 2026-01-22 19:21:46,397 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 19:22:15] 2026-01-22 19:21:46,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 19:22:15] 2026-01-22 19:21:46,464 | INFO     | did not find any defunct processes belonging to 1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:46,528 | INFO     | did not find any defunct processes belonging to 1591782
[2026-01-22 19:22:15] 2026-01-22 19:21:46,528 | INFO     | ready for new job
[2026-01-22 19:22:15] 2026-01-22 19:21:46,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 19:22:15] 2026-01-22 19:21:46,531 | INFO     | **************************************
[2026-01-22 19:22:15] 2026-01-22 19:21:46,531 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 19:22:15] 2026-01-22 19:21:46,532 | INFO     | **************************************
[2026-01-22 19:22:15] 2026-01-22 19:21:46,532 | INFO     | 
[2026-01-22 19:22:15] 2026-01-22 19:21:46,582 | INFO     | architecture information:
[2026-01-22 19:22:15] 2026-01-22 19:21:46,583 | INFO     | executing command: cat /etc/os-release
[2026-01-22 19:22:15] 2026-01-22 19:21:46,607 | INFO     | cat /etc/os-release:
[2026-01-22 19:22:15] NAME="CentOS Linux"
[2026-01-22 19:22:15] VERSION="7 (Core)"
[2026-01-22 19:22:15] ID="centos"
[2026-01-22 19:22:15] ID_LIKE="rhel fedora"
[2026-01-22 19:22:15] VERSION_ID="7"
[2026-01-22 19:22:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 19:22:15] ANSI_COLOR="0;31"
[2026-01-22 19:22:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 19:22:15] HOME_URL="https://www.centos.org/"
[2026-01-22 19:22:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 19:22:15] 
[2026-01-22 19:22:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 19:22:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 19:22:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 19:22:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 19:22:15] 
[2026-01-22 19:22:15] 2026-01-22 19:21:46,608 | INFO     | **************************************
[2026-01-22 19:22:15] 2026-01-22 19:21:46,747 | INFO     | number of running child processes to parent process 1591782: 1
[2026-01-22 19:22:15] 2026-01-22 19:21:46,748 | INFO     | maximum number of monitored processes: 6
[2026-01-22 19:22:15] 2026-01-22 19:21:46,748 | INFO     | aborting job monitoring since job object (job id=6979137755) has expired
[2026-01-22 19:22:15] 2026-01-22 19:21:47,111 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-01-22 19:22:15] 2026-01-22 19:21:47,139 | INFO     | sufficient remaining disk space (1710436122624 B)
[2026-01-22 19:22:15] 2026-01-22 19:21:47,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 19:22:15] 2026-01-22 19:21:47,140 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 19:22:15] 2026-01-22 19:21:47,140 | INFO     | update_server=False
[2026-01-22 19:22:15] 2026-01-22 19:21:47,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 19:22:15] 2026-01-22 19:21:47,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 19:22:15] 2026-01-22 19:21:47,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 19:22:15] 2026-01-22 19:21:47,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 19:22:15] 2026-01-22 19:21:47,142 | INFO     | will abort loop
[2026-01-22 19:22:15] 2026-01-22 19:21:47,237 | INFO     | all job control threads have been joined
[2026-01-22 19:22:15] 2026-01-22 19:21:47,927 | INFO     | all payload control threads have been joined
[2026-01-22 19:22:15] 2026-01-22 19:21:48,144 | INFO     | [job] job monitor thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,144 | INFO     | [job] retrieve thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 19:22:15] 2026-01-22 19:21:48,205 | INFO     | all data control threads have been joined
[2026-01-22 19:22:15] 2026-01-22 19:21:48,240 | INFO     | [job] control thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,376 | INFO     | [payload] validate_post thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,412 | INFO     | [payload] failed_post thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,481 | INFO     | [job] validate thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,624 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,628 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,866 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:48,933 | INFO     | [payload] control thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:49,075 | INFO     | [data] copytool_in thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:49,147 | INFO     | [data] copytool_out thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:49,164 | INFO     | [job] queue monitor thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:49,211 | INFO     | [data] control thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:49,269 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:51,148 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 19:22:15] 2026-01-22 19:21:53,488 | INFO     | [monitor] cgroup control has ended
[2026-01-22 19:22:15] 2026-01-22 19:21:54,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033926330176)>', '<ExcThread(monitor, started 140033474406144)>']
[2026-01-22 19:22:15] 2026-01-22 19:21:59,696 | INFO     | all workflow threads have been joined
[2026-01-22 19:22:15] 2026-01-22 19:21:59,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 19:22:15] 2026-01-22 19:21:59,696 | INFO     | traces error code: 0
[2026-01-22 19:22:15] 2026-01-22 19:21:59,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 19:22:15] 2026-01-22 19:22:15,426 | INFO     | PID=1586098 has CPU usage=17.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-22 19:22:15] 2026-01-22 19:22:15,426 | INFO     | .. there are 15 such processes running
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | CRITICAL | thread 'MainThread' is not alive
[2026-01-22 19:22:15] 2026-01-22 19:22:15,427 | INFO     | [monitor] control thread has ended
[2026-01-22 19:22:15] 2026-01-22 19:22:15,573 [wrapper] ==== pilot stdout END ====
[2026-01-22 19:22:15] 2026-01-22 19:22:15,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 19:22:15] 2026-01-22 19:22:15,582 [wrapper] pilotpid: 1586098
[2026-01-22 19:22:15] 2026-01-22 19:22:15,589 [wrapper] Pilot exit status: 0
[2026-01-22 19:22:15] 2026-01-22 19:22:15,603 [wrapper] pandaids: 6979137755
[2026-01-22 19:22:15] 2026-01-22 19:22:15,743 [wrapper] cleanup supervisor_pilot 1932044 1586099
[2026-01-22 19:22:15] 2026-01-22 19:22:15,747 [wrapper] Test setup, not cleaning
[2026-01-22 19:22:15] 2026-01-22 19:22:15,750 [wrapper] apfmon messages muted
[2026-01-22 19:22:15] 2026-01-22 19:22:15,753 [wrapper] ==== wrapper stdout END ====
[2026-01-22 19:22:15] 2026-01-22 19:22:15,755 [wrapper] ==== wrapper stderr END ====
[2026-01-22 19:22:15]  *** Error codes and diagnostics ***
[2026-01-22 19:22:15]     "exeErrorCode": 0,
[2026-01-22 19:22:15]     "exeErrorDiag": "",
[2026-01-22 19:22:15]     "pilotErrorCode": 0,
[2026-01-22 19:22:15]     "pilotErrorDiag": "",
[2026-01-22 19:22:15]  *** Listing of results directory ***
[2026-01-22 19:22:15] total 679056
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc    584422 Jan 22 02:30 pilot3.tar.gz
[2026-01-22 19:22:15] -rwx------ 1 boinc boinc     36322 Jan 22 02:30 runpilot2-wrapper.sh
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc      5111 Jan 22 02:30 queuedata.json
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc       100 Jan 22 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 19:22:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 17:53 run_atlas
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc       105 Jan 22 17:53 job.xml
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc     15845 Jan 22 17:53 start_atlas.sh
[2026-01-22 19:22:15] drwxrwx--x 2 boinc boinc      4096 Jan 22 17:53 shared
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc    597765 Jan 22 17:53 input.tar.gz
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc      9416 Jan 22 17:53 init_data.xml
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc 346676108 Jan 22 17:53 EVNT.48313002._000015.pool.root.1
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc         0 Jan 22 17:53 boinc_setup_complete
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc         0 Jan 22 17:53 boinc_lockfile
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc      2629 Jan 22 17:53 pandaJob.out
[2026-01-22 19:22:15] -rw------- 1 boinc boinc   1002389 Jan 22 17:53 agis_schedconf.cvmfs.json
[2026-01-22 19:22:15] -rw------- 1 boinc boinc   1516246 Jan 22 17:53 agis_ddmendpoints.agis.ALL.json
[2026-01-22 19:22:15] -rw------- 1 boinc boinc       421 Jan 22 17:53 workernode_map.json
[2026-01-22 19:22:15] drwx------ 5 boinc boinc      4096 Jan 22 17:53 pilot3
[2026-01-22 19:22:15] -rw------- 1 boinc boinc 342353209 Jan 22 19:20 HITS.48313004._000351.pool.root.1
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc       530 Jan 22 19:20 boinc_task_state.xml
[2026-01-22 19:22:15] -rw------- 1 boinc boinc      1029 Jan 22 19:21 memory_monitor_summary.json
[2026-01-22 19:22:15] -rw------- 1 boinc boinc    446847 Jan 22 19:21 log.48313004._000351.job.log.tgz.1
[2026-01-22 19:22:15] -rw------- 1 boinc boinc      6279 Jan 22 19:21 heartbeat.json
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc        27 Jan 22 19:22 wrapper_checkpoint.txt
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc      8192 Jan 22 19:22 boinc_mmap_file
[2026-01-22 19:22:15] -rw------- 1 boinc boinc       894 Jan 22 19:22 pilotlog.txt
[2026-01-22 19:22:15] -rw------- 1 boinc boinc        95 Jan 22 19:22 pilot_heartbeat.json
[2026-01-22 19:22:15] -rw------- 1 boinc boinc    748158 Jan 22 19:22 log.48313004._000351.job.log.1
[2026-01-22 19:22:15] -rw------- 1 boinc boinc       357 Jan 22 19:22 output.list
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc       620 Jan 22 19:22 runtime_log
[2026-01-22 19:22:15] -rw------- 1 boinc boinc   1208320 Jan 22 19:22 result.tar.gz
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc      8787 Jan 22 19:22 runtime_log.err
[2026-01-22 19:22:15] -rw------- 1 boinc boinc       643 Jan 22 19:22 HkfKDmrdz28n9Rq4apOajLDm4fhM0noT9bVo0NGKDms1sKDm0KmkLn.diag
[2026-01-22 19:22:15] -rw-r--r-- 1 boinc boinc     21261 Jan 22 19:22 stderr.txt
[2026-01-22 19:22:15] HITS file was successfully produced:
[2026-01-22 19:22:15] -rw------- 1 boinc boinc 342353209 Jan 22 19:20 shared/HITS.pool.root.1
[2026-01-22 19:22:15]  *** Contents of shared directory: ***
[2026-01-22 19:22:15] total 674672
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc     15845 Jan 22 17:53 start_atlas.sh
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc    597765 Jan 22 17:53 input.tar.gz
[2026-01-22 19:22:15] -rw-r--r-- 2 boinc boinc 346676108 Jan 22 17:53 ATLAS.root_0
[2026-01-22 19:22:15] -rw------- 1 boinc boinc 342353209 Jan 22 19:20 HITS.pool.root.1
[2026-01-22 19:22:15] -rw------- 1 boinc boinc   1208320 Jan 22 19:22 result.tar.gz
19:22:17 (1581038): run_atlas exited; CPU time 58788.672439
19:22:17 (1581038): called boinc_finish(0)

</stderr_txt>
]]>

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