Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:29 (1595317): wrapper (7.7.26015): starting
01:43:29 (1595317): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 01:43:29] Arguments: --nthreads 4
[2026-01-23 01:43:29] Threads: 4
[2026-01-23 01:43:29] Checking for CVMFS
[2026-01-23 01:43:29] No cvmfs_config command found, will try listing directly
[2026-01-23 01:43:29] CVMFS is ok
[2026-01-23 01:43:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 01:43:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 01:43:29] Further information can be found at the LHC@home message board.
[2026-01-23 01:43:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 01:43:29] Checking for apptainer binary...
[2026-01-23 01:43:29] which: no apptainer in ((null))
[2026-01-23 01:43:29] apptainer is not installed, using version from CVMFS
[2026-01-23 01:43:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 01:43:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-01-23 01:43:29] apptainer works
[2026-01-23 01:43:29] Set ATHENA_PROC_NUMBER=4
[2026-01-23 01:43:29] Set ATHENA_CORE_NUMBER=4
[2026-01-23 01:43:29] Starting ATLAS job with PandaID=6977394271
[2026-01-23 01:43:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 04:59:43]  *** The last 200 lines of the pilot log: ***
[2026-01-23 04:59:43] 2026-01-23 03:53:03,399 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 04:59:43] 2026-01-23 03:53:03,492 | INFO     | job 6977394271 has state=finished
[2026-01-23 04:59:43] 2026-01-23 03:53:03,492 | INFO     | preparing for final server update for job 6977394271 in state='finished'
[2026-01-23 04:59:43] 2026-01-23 03:53:03,492 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6977394271/jobReport.json
[2026-01-23 04:59:43] 2026-01-23 03:53:03,495 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-01-23 04:59:43] 2026-01-23 03:53:03,495 | INFO     | this job has now completed (state=finished)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,496 | INFO     | log transfer has been attempted: DONE
[2026-01-23 04:59:43] 2026-01-23 03:53:03,496 | INFO     | job 6977394271 has finished - writing final server update
[2026-01-23 04:59:43] 2026-01-23 03:53:03,496 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3107503/.job.ad'
[2026-01-23 04:59:43] 2026-01-23 03:53:03,496 | INFO     | total number of processed events: 400 (read)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,508 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6977394271/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,509 | INFO     | extracted standard info from prmon json
[2026-01-23 04:59:43] 2026-01-23 03:53:03,509 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 04:59:43] 2026-01-23 03:53:03,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 04:59:43] 2026-01-23 03:53:03,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 04:59:43] 2026-01-23 03:53:03,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 04:59:43] 2026-01-23 03:53:03,513 | INFO     | fitting pss+swap vs Time
[2026-01-23 04:59:43] 2026-01-23 03:53:03,513 | INFO     | sum of square deviations: 1995283922.5
[2026-01-23 04:59:43] 2026-01-23 03:53:03,515 | INFO     | sum of deviations: 2887573652.999996
[2026-01-23 04:59:43] 2026-01-23 03:53:03,515 | INFO     | mean x: 1769134690.5
[2026-01-23 04:59:43] 2026-01-23 03:53:03,515 | INFO     | mean y: 2351484.580645161
[2026-01-23 04:59:43] 2026-01-23 03:53:03,515 | INFO     | intersect: -2557939140.3723073
[2026-01-23 04:59:43] 2026-01-23 03:53:03,515 | INFO     | chi2: 1.4108052144668644
[2026-01-23 04:59:43] 2026-01-23 03:53:03,516 | INFO     | sum of square deviations: 1838657730.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,517 | INFO     | sum of deviations: 2962339584.0000057
[2026-01-23 04:59:43] 2026-01-23 03:53:03,517 | INFO     | mean x: 1769134538.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,517 | INFO     | mean y: 2351557.414364641
[2026-01-23 04:59:43] 2026-01-23 03:53:03,517 | INFO     | intersect: -2847976258.268308
[2026-01-23 04:59:43] 2026-01-23 03:53:03,517 | INFO     | chi2: 1.4113915146281049
[2026-01-23 04:59:43] 2026-01-23 03:53:03,518 | INFO     | current chi2=1.4113915146281049 (change=-0.04155783911403139 %)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,518 | INFO     | right removable region: 180
[2026-01-23 04:59:43] 2026-01-23 03:53:03,518 | INFO     | sum of square deviations: 1838657730.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,519 | INFO     | sum of deviations: -20698901799.000004
[2026-01-23 04:59:43] 2026-01-23 03:53:03,519 | INFO     | mean x: 1769134843.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,519 | INFO     | mean y: 2374123.375690608
[2026-01-23 04:59:43] 2026-01-23 03:53:03,519 | INFO     | intersect: 19918613990.62183
[2026-01-23 04:59:43] 2026-01-23 03:53:03,520 | INFO     | chi2: 0.0788236036445064
[2026-01-23 04:59:43] 2026-01-23 03:53:03,520 | INFO     | current chi2=0.0788236036445064 (change=94.41286416889993 %)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,520 | INFO     | sum of square deviations: 1690450300.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,521 | INFO     | sum of deviations: -17314767497.5
[2026-01-23 04:59:43] 2026-01-23 03:53:03,521 | INFO     | mean x: 1769134995.5
[2026-01-23 04:59:43] 2026-01-23 03:53:03,521 | INFO     | mean y: 2370634.096590909
[2026-01-23 04:59:43] 2026-01-23 03:53:03,521 | INFO     | intersect: 18123081499.582085
[2026-01-23 04:59:43] 2026-01-23 03:53:03,522 | INFO     | chi2: 0.07509184931721487
[2026-01-23 04:59:43] 2026-01-23 03:53:03,522 | INFO     | current chi2=0.07509184931721487 (change=4.7343107327618545 %)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,522 | INFO     | left removable region: 20
[2026-01-23 04:59:43] 2026-01-23 03:53:03,522 | INFO     | sum of square deviations: 1270051720.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,523 | INFO     | sum of deviations: -8621275180.0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,523 | INFO     | mean x: 1769135117.5
[2026-01-23 04:59:43] 2026-01-23 03:53:03,523 | INFO     | mean y: 2361759.1875
[2026-01-23 04:59:43] 2026-01-23 03:53:03,524 | INFO     | intersect: 12011479528.477348
[2026-01-23 04:59:43] 2026-01-23 03:53:03,524 | INFO     | chi2: 0.052142736351895
[2026-01-23 04:59:43] 2026-01-23 03:53:03,524 | INFO     | current memory leak: -6.79 B/s (using 160 data points, chi2=0.05)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,524 | INFO     | could have reported an average CPU frequency of 2589 MHz (10 samples)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | ..............................
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . Timing measurements:
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . get job = 0 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . initial setup = 5 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . payload setup = 6 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . stage-in = 0 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . payload execution = 11332 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . stage-out = 1 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | . log creation = 0 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,525 | INFO     | ..............................
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | 
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | job summary report
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | --------------------------------------------------
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | PanDA job id: 6977394271
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | task id: 48299613
[2026-01-23 04:59:43] 2026-01-23 03:53:03,997 | INFO     | errors: (none)
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | pilot state: finished 
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | transexitcode: 0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | exeerrorcode: 0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | exeerrordiag: 
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | exitcode: 0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | exitmsg: OK
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | cpuconsumptiontime: 43776 s
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | nevents: 400
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | neventsw: 0
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | pid: 1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | pgrp: 1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:03,998 | INFO     | corecount: 4
[2026-01-23 04:59:43] 2026-01-23 03:53:03,999 | INFO     | event service: False
[2026-01-23 04:59:43] 2026-01-23 03:53:03,999 | INFO     | sizes: {0: 2283964, 1: 2284425, 11: 2284425, 11342: 2313797, 11344: 2322817, 11347: 2323195}
[2026-01-23 04:59:43] 2026-01-23 03:53:03,999 | INFO     | --------------------------------------------------
[2026-01-23 04:59:43] 2026-01-23 03:53:03,999 | INFO     | 
[2026-01-23 04:59:43] 2026-01-23 03:53:03,999 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-23 04:59:43] 2026-01-23 03:53:04,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,021 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,021 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | job 6977394271 has completed (purged errors)
[2026-01-23 04:59:43] 2026-01-23 03:53:04,023 | INFO     | overall cleanup function is called
[2026-01-23 04:59:43] 2026-01-23 03:53:05,031 | INFO     | --- collectZombieJob: --- 10, [1603908]
[2026-01-23 04:59:43] 2026-01-23 03:53:05,031 | INFO     | zombie collector waiting for pid 1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:05,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 04:59:43] 2026-01-23 03:53:05,031 | INFO     | collected zombie processes
[2026-01-23 04:59:43] 2026-01-23 03:53:05,031 | INFO     | will attempt to kill all subprocesses of pid=1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:05,423 | INFO     | process IDs to be killed: [1603908] (in reverse order)
[2026-01-23 04:59:43] 2026-01-23 03:53:05,541 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 04:59:43] 2026-01-23 03:53:05,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 04:59:43] 2026-01-23 03:53:05,555 | INFO     | did not find any defunct processes belonging to 1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:05,568 | INFO     | did not find any defunct processes belonging to 1603908
[2026-01-23 04:59:43] 2026-01-23 03:53:05,568 | INFO     | ready for new job
[2026-01-23 04:59:43] 2026-01-23 03:53:05,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 04:59:43] 2026-01-23 03:53:05,571 | INFO     | **************************************
[2026-01-23 04:59:43] 2026-01-23 03:53:05,571 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 04:59:43] 2026-01-23 03:53:05,571 | INFO     | **************************************
[2026-01-23 04:59:43] 2026-01-23 03:53:05,571 | INFO     | 
[2026-01-23 04:59:43] 2026-01-23 03:53:05,576 | INFO     | architecture information:
[2026-01-23 04:59:43] 2026-01-23 03:53:05,576 | INFO     | executing command: cat /etc/os-release
[2026-01-23 04:59:43] 2026-01-23 03:53:05,592 | INFO     | cat /etc/os-release:
[2026-01-23 04:59:43] NAME="CentOS Linux"
[2026-01-23 04:59:43] VERSION="7 (Core)"
[2026-01-23 04:59:43] ID="centos"
[2026-01-23 04:59:43] ID_LIKE="rhel fedora"
[2026-01-23 04:59:43] VERSION_ID="7"
[2026-01-23 04:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 04:59:43] ANSI_COLOR="0;31"
[2026-01-23 04:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 04:59:43] HOME_URL="https://www.centos.org/"
[2026-01-23 04:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 04:59:43] 
[2026-01-23 04:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 04:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 04:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 04:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 04:59:43] 
[2026-01-23 04:59:43] 2026-01-23 03:53:05,592 | INFO     | **************************************
[2026-01-23 04:59:43] 2026-01-23 03:53:06,095 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-23 04:59:43] 2026-01-23 03:53:06,111 | INFO     | sufficient remaining disk space (671237537792 B)
[2026-01-23 04:59:43] 2026-01-23 03:53:06,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 04:59:43] 2026-01-23 03:53:06,112 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 04:59:43] 2026-01-23 03:53:06,112 | INFO     | update_server=False
[2026-01-23 04:59:43] 2026-01-23 03:53:06,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 04:59:43] 2026-01-23 03:53:06,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 04:59:43] 2026-01-23 03:53:06,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 04:59:43] 2026-01-23 03:53:06,113 | INFO     | aborting loop
[2026-01-23 04:59:43] 2026-01-23 03:53:06,391 | INFO     | all data control threads have been joined
[2026-01-23 04:59:43] 2026-01-23 03:53:07,115 | INFO     | [job] job monitor thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,117 | INFO     | [job] retrieve thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,268 | INFO     | all job control threads have been joined
[2026-01-23 04:59:43] 2026-01-23 03:53:07,396 | INFO     | [data] control thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,606 | INFO     | all payload control threads have been joined
[2026-01-23 04:59:43] 2026-01-23 03:53:07,687 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,737 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,866 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:07,911 | INFO     | [job] validate thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,118 | INFO     | [data] copytool_out thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,273 | INFO     | [job] control thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,357 | INFO     | [payload] validate_post thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,548 | INFO     | [data] copytool_in thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,549 | INFO     | [payload] failed_post thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,611 | INFO     | [payload] control thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:08,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 04:59:43] 2026-01-23 03:53:09,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 04:59:43] 2026-01-23 03:53:09,632 | INFO     | [job] queue monitor thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:13,503 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 04:59:43] 2026-01-23 03:53:36,006 | INFO     | PID=1599154 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 04:59:43] 2026-01-23 03:53:36,006 | INFO     | .. there are 5 such processes running
[2026-01-23 04:59:43] 2026-01-23 03:53:36,006 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 04:59:43] 2026-01-23 03:53:36,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 04:59:43] 2026-01-23 03:53:36,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 04:59:43] 2026-01-23 03:54:04,032 | INFO     | [monitor] cgroup control has ended
[2026-01-23 04:59:43] 2026-01-23 03:54:04,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23173818677056)>', '<ExcThread(monitor, started 23173581256448)>']
[2026-01-23 04:59:43] 2026-01-23 03:54:05,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 04:59:43] 2026-01-23 03:54:05,141 | INFO     | [monitor] control thread has ended
[2026-01-23 04:59:43] 2026-01-23 03:54:09,899 | INFO     | all workflow threads have been joined
[2026-01-23 04:59:43] 2026-01-23 03:54:09,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 04:59:43] 2026-01-23 03:54:09,899 | INFO     | traces error code: 0
[2026-01-23 04:59:43] 2026-01-23 03:54:09,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 04:59:43] 2026-01-23 03:54:10,087 [wrapper] ==== pilot stdout END ====
[2026-01-23 04:59:43] 2026-01-23 03:54:10,090 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 04:59:43] 2026-01-23 03:54:10,093 [wrapper] pilotpid: 1599154
[2026-01-23 04:59:43] 2026-01-23 03:54:10,095 [wrapper] Pilot exit status: 0
[2026-01-23 04:59:43] 2026-01-23 03:54:10,107 [wrapper] pandaids: 6977394271
[2026-01-23 04:59:43] 2026-01-23 03:54:10,185 [wrapper] cleanup supervisor_pilot 1706132 1599155
[2026-01-23 04:59:43] 2026-01-23 03:54:10,188 [wrapper] Test setup, not cleaning
[2026-01-23 04:59:43] 2026-01-23 03:54:10,192 [wrapper] apfmon messages muted
[2026-01-23 04:59:43] 2026-01-23 03:54:10,194 [wrapper] ==== wrapper stdout END ====
[2026-01-23 04:59:43] 2026-01-23 03:54:10,197 [wrapper] ==== wrapper stderr END ====
[2026-01-23 04:59:43]  *** Error codes and diagnostics ***
[2026-01-23 04:59:43]     "exeErrorCode": 0,
[2026-01-23 04:59:43]     "exeErrorDiag": "",
[2026-01-23 04:59:43]     "pilotErrorCode": 0,
[2026-01-23 04:59:43]     "pilotErrorDiag": "",
[2026-01-23 04:59:43]  *** Listing of results directory ***
[2026-01-23 04:59:43] total 427020
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc    584422 Jan 21 14:43 pilot3.tar.gz
[2026-01-23 04:59:43] -rwx------ 1 boinc boinc     36322 Jan 21 14:44 runpilot2-wrapper.sh
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc      5111 Jan 21 14:45 queuedata.json
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc       100 Jan 23 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 04:59:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 01:43 run_atlas
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc       105 Jan 23 01:43 job.xml
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc 253617001 Jan 23 01:43 EVNT.48299611._000009.pool.root.1
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc      6638 Jan 23 01:43 init_data.xml
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc     15845 Jan 23 01:43 start_atlas.sh
[2026-01-23 04:59:43] drwxrwx--x 2 boinc boinc      4096 Jan 23 01:43 shared
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc    597773 Jan 23 01:43 input.tar.gz
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc         0 Jan 23 01:43 boinc_lockfile
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc      2628 Jan 23 01:43 pandaJob.out
[2026-01-23 04:59:43] -rw------- 1 boinc boinc   1003897 Jan 23 01:43 agis_schedconf.cvmfs.json
[2026-01-23 04:59:43] -rw------- 1 boinc boinc       451 Jan 23 01:43 workernode_map.json
[2026-01-23 04:59:43] drwx------ 5 boinc boinc      4096 Jan 23 01:43 pilot3
[2026-01-23 04:59:43] -rw------- 1 boinc boinc 175766307 Jan 23 04:52 HITS.48299613._000210.pool.root.1
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc       528 Jan 23 04:52 boinc_task_state.xml
[2026-01-23 04:59:43] -rw------- 1 boinc boinc      1035 Jan 23 04:52 memory_monitor_summary.json
[2026-01-23 04:59:43] -rw------- 1 boinc boinc        95 Jan 23 04:52 pilot_heartbeat.json
[2026-01-23 04:59:43] -rw------- 1 boinc boinc   1516246 Jan 23 04:52 agis_ddmendpoints.agis.ALL.json
[2026-01-23 04:59:43] -rw------- 1 boinc boinc    361321 Jan 23 04:53 log.48299613._000210.job.log.tgz.1
[2026-01-23 04:59:43] -rw------- 1 boinc boinc      6400 Jan 23 04:53 heartbeat.json
[2026-01-23 04:59:43] -rw------- 1 boinc boinc      4829 Jan 23 04:54 pilotlog.txt
[2026-01-23 04:59:43] -rw------- 1 boinc boinc   1610153 Jan 23 04:54 log.48299613._000210.job.log.1
[2026-01-23 04:59:43] -rw------- 1 boinc boinc       357 Jan 23 04:54 output.list
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc       620 Jan 23 04:54 runtime_log
[2026-01-23 04:59:43] -rw------- 1 boinc boinc   1986560 Jan 23 04:54 result.tar.gz
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc      9205 Jan 23 04:54 runtime_log.err
[2026-01-23 04:59:43] -rw------- 1 boinc boinc       665 Jan 23 04:54 MF5KDmbgn28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr0rKDmVWuXWn.diag
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc        26 Jan 23 04:59 wrapper_checkpoint.txt
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc      8192 Jan 23 04:59 boinc_mmap_file
[2026-01-23 04:59:43] -rw-r--r-- 1 boinc boinc     21125 Jan 23 04:59 stderr.txt
[2026-01-23 04:59:43] HITS file was successfully produced:
[2026-01-23 04:59:43] -rw------- 1 boinc boinc 175766307 Jan 23 04:52 shared/HITS.pool.root.1
[2026-01-23 04:59:43]  *** Contents of shared directory: ***
[2026-01-23 04:59:43] total 421872
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc 253617001 Jan 23 01:43 ATLAS.root_0
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc     15845 Jan 23 01:43 start_atlas.sh
[2026-01-23 04:59:43] -rw-r--r-- 2 boinc boinc    597773 Jan 23 01:43 input.tar.gz
[2026-01-23 04:59:43] -rw------- 1 boinc boinc 175766307 Jan 23 04:52 HITS.pool.root.1
[2026-01-23 04:59:43] -rw------- 1 boinc boinc   1986560 Jan 23 04:54 result.tar.gz
04:59:45 (1595317): run_atlas exited; CPU time 44256.703505
04:59:45 (1595317): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN