Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:30:13 (17998): wrapper (7.7.26015): starting
20:30:13 (17998): wrapper: running run_atlas (--nthreads 8)
[2026-01-22 20:30:13] Arguments: --nthreads 8
[2026-01-22 20:30:13] Threads: 8
[2026-01-22 20:30:13] Checking for CVMFS
[2026-01-22 20:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 20:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 20:30:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 20:30:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 20:30:13] 2.11.0.0 4155 71197 66184 155402 1 188 2088449 4096001 0 130560 2 1609276 99.053 3735556 420 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-22 20:30:13] CVMFS is ok
[2026-01-22 20:30:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 20:30:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 20:30:13] Further information can be found at the LHC@home message board.
[2026-01-22 20:30:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 20:30:13] Checking for apptainer binary...
[2026-01-22 20:30:13] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-22 20:30:13] apptainer is not installed, using version from CVMFS
[2026-01-22 20:30:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 20:30:13] WARNING: Environment variable TMPDIR already has value [/tmp/job_11038855/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node183
[2026-01-22 20:30:13] apptainer works
[2026-01-22 20:30:13] Set ATHENA_PROC_NUMBER=8
[2026-01-22 20:30:13] Set ATHENA_CORE_NUMBER=8
[2026-01-22 20:30:13] Starting ATLAS job with PandaID=6978791079
[2026-01-22 20:30:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11038855/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 21:45:34]  *** The last 200 lines of the pilot log: ***
[2026-01-22 21:45:34]  is_tar=False
[2026-01-22 21:45:34]  lfn=log.48313427._000233.job.log.tgz.1
[2026-01-22 21:45:34]  mtime=0
[2026-01-22 21:45:34]  protocol_id=None
[2026-01-22 21:45:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 21:45:34]  replicas=None
[2026-01-22 21:45:34]  scope=mc23_13p6TeV
[2026-01-22 21:45:34]  status=None
[2026-01-22 21:45:34]  status_code=0
[2026-01-22 21:45:34]  storage_token=
[2026-01-22 21:45:34]  surl=/tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/log.48313427._000233.job.log.tgz.1
[2026-01-22 21:45:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/6e/log.48313427._000233.job.log.tgz.1
[2026-01-22 21:45:34]  workdir=None
[2026-01-22 21:45:34] ]
[2026-01-22 21:45:34] 2026-01-22 20:44:39,545 | INFO     | transferring file log.48313427._000233.job.log.tgz.1 from /tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/log.48313427._000233.job.log.tgz.1 to /tmp/j
[2026-01-22 21:45:34] 2026-01-22 20:44:39,545 | INFO     | executing command: /usr/bin/env mv /tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/log.48313427._000233.job.log.tgz.1 /tmp/job_11038855/atlas/pilot/sl
[2026-01-22 21:45:34] 2026-01-22 20:44:39,553 | INFO     | adding to output.list: log.48313427._000233.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/6e/log.48313427._000233.job.log.tg
[2026-01-22 21:45:34] 2026-01-22 20:44:39,554 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 21:45:34] 2026-01-22 20:44:39,554 | INFO     | summary of transferred files:
[2026-01-22 21:45:34] 2026-01-22 20:44:39,554 | INFO     |  -- lfn=log.48313427._000233.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 21:45:34] 2026-01-22 20:44:39,554 | INFO     | stage-out finished correctly
[2026-01-22 21:45:34] 2026-01-22 20:44:40,082 | INFO     | time since job start (4460s) is within the limit (349056.0s)
[2026-01-22 21:45:34] 2026-01-22 20:44:40,094 | WARNING  | process 28452 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 21:45:34] 2026-01-22 20:44:40,094 | INFO     | using path: /tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 21:45:34] 2026-01-22 20:44:40,193 | INFO     | number of running child processes to parent process 28452: 1
[2026-01-22 21:45:34] 2026-01-22 20:44:40,193 | INFO     | maximum number of monitored processes: 6
[2026-01-22 21:45:34] 2026-01-22 20:44:40,859 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 21:45:34] 2026-01-22 20:44:41,217 | INFO     | PID=22853 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,217 | INFO     | .. there are 4 such processes running
[2026-01-22 21:45:34] 2026-01-22 20:44:41,596 | INFO     | job 6978791079 has state=finished
[2026-01-22 21:45:34] 2026-01-22 20:44:41,596 | INFO     | preparing for final server update for job 6978791079 in state='finished'
[2026-01-22 21:45:34] 2026-01-22 20:44:41,596 | INFO     | reading metadata from: /tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/jobReport.json
[2026-01-22 21:45:34] 2026-01-22 20:44:41,597 | INFO     | added worker_node to metadata from /tmp/job_11038855/atlas/pilot/slots/0/workernode_map.json
[2026-01-22 21:45:34] 2026-01-22 20:44:41,597 | INFO     | this job has now completed (state=finished)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,597 | INFO     | log transfer has been attempted: DONE
[2026-01-22 21:45:34] 2026-01-22 20:44:41,598 | INFO     | job 6978791079 has finished - writing final server update
[2026-01-22 21:45:34] 2026-01-22 20:44:41,598 | INFO     | total number of processed events: 400 (read)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | INFO     | using path: /tmp/job_11038855/atlas/pilot/slots/0/PanDA_Pilot-6978791079/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | INFO     | extracted standard info from prmon json
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 21:45:34] 2026-01-22 20:44:41,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 21:45:34] 2026-01-22 20:44:41,617 | INFO     | fitting pss+swap vs Time
[2026-01-22 21:45:34] 2026-01-22 20:44:41,617 | INFO     | sum of square deviations: 89127252.5
[2026-01-22 21:45:34] 2026-01-22 20:44:41,617 | INFO     | sum of deviations: -3234553639.4999995
[2026-01-22 21:45:34] 2026-01-22 20:44:41,617 | INFO     | mean x: 1769112523.5
[2026-01-22 21:45:34] 2026-01-22 20:44:41,617 | INFO     | mean y: 2672695.984848485
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | intersect: 64206260162.92661
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | chi2: 0.07449101878870877
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | current memory leak: -36.29 B/s (using 66 data points, chi2=0.07)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | ..............................
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . Timing measurements:
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . get job = 0 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . initial setup = 2 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . payload setup = 2 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . stage-in = 0 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . payload execution = 4442 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . stage-out = 0 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | . log creation = 0 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,618 | INFO     | ..............................
[2026-01-22 21:45:34] 2026-01-22 20:44:41,665 | INFO     | 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,665 | INFO     | job summary report
[2026-01-22 21:45:34] 2026-01-22 20:44:41,665 | INFO     | --------------------------------------------------
[2026-01-22 21:45:34] 2026-01-22 20:44:41,665 | INFO     | PanDA job id: 6978791079
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | task id: 48313427
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | errors: (none)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | pilot state: finished 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | transexitcode: 0
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | exeerrorcode: 0
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | exeerrordiag: 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | exitcode: 0
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | exitmsg: OK
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | cpuconsumptiontime: 32944 s
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | nevents: 400
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | neventsw: 0
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | pid: 28452
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | pgrp: 28452
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | corecount: 8
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | event service: False
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | sizes: {0: 2283307, 1: 2284551, 11: 2284551, 4448: 2319890, 4450: 2320084}
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | --------------------------------------------------
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | 
[2026-01-22 21:45:34] 2026-01-22 20:44:41,666 | INFO     | executing command: ls -lF /tmp/job_11038855/atlas/pilot/slots/0
[2026-01-22 21:45:34] 2026-01-22 20:44:41,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | job 6978791079 has completed (purged errors)
[2026-01-22 21:45:34] 2026-01-22 20:44:41,676 | INFO     | overall cleanup function is called
[2026-01-22 21:45:34] 2026-01-22 20:44:42,682 | INFO     | --- collectZombieJob: --- 10, [28452]
[2026-01-22 21:45:34] 2026-01-22 20:44:42,682 | INFO     | zombie collector waiting for pid 28452
[2026-01-22 21:45:34] 2026-01-22 20:44:42,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 21:45:34] 2026-01-22 20:44:42,683 | INFO     | collected zombie processes
[2026-01-22 21:45:34] 2026-01-22 20:44:42,683 | INFO     | will attempt to kill all subprocesses of pid=28452
[2026-01-22 21:45:34] 2026-01-22 20:44:42,787 | INFO     | process IDs to be killed: [28452] (in reverse order)
[2026-01-22 21:45:34] 2026-01-22 20:44:42,824 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 21:45:34] 2026-01-22 20:44:42,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 21:45:34] 2026-01-22 20:44:42,828 | INFO     | did not find any defunct processes belonging to 28452
[2026-01-22 21:45:34] 2026-01-22 20:44:42,831 | INFO     | did not find any defunct processes belonging to 28452
[2026-01-22 21:45:34] 2026-01-22 20:44:42,831 | INFO     | ready for new job
[2026-01-22 21:45:34] 2026-01-22 20:44:42,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 21:45:34] 2026-01-22 20:44:42,832 | INFO     | **************************************
[2026-01-22 21:45:34] 2026-01-22 20:44:42,832 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 21:45:34] 2026-01-22 20:44:42,832 | INFO     | **************************************
[2026-01-22 21:45:34] 2026-01-22 20:44:42,832 | INFO     | 
[2026-01-22 21:45:34] 2026-01-22 20:44:42,846 | INFO     | architecture information:
[2026-01-22 21:45:34] 2026-01-22 20:44:42,846 | INFO     | executing command: cat /etc/os-release
[2026-01-22 21:45:34] 2026-01-22 20:44:42,854 | INFO     | cat /etc/os-release:
[2026-01-22 21:45:34] NAME="CentOS Linux"
[2026-01-22 21:45:34] VERSION="7 (Core)"
[2026-01-22 21:45:34] ID="centos"
[2026-01-22 21:45:34] ID_LIKE="rhel fedora"
[2026-01-22 21:45:34] VERSION_ID="7"
[2026-01-22 21:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 21:45:34] ANSI_COLOR="0;31"
[2026-01-22 21:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 21:45:34] HOME_URL="https://www.centos.org/"
[2026-01-22 21:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 21:45:34] 
[2026-01-22 21:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 21:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 21:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 21:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 21:45:34] 
[2026-01-22 21:45:34] 2026-01-22 20:44:42,854 | INFO     | **************************************
[2026-01-22 21:45:34] 2026-01-22 20:44:43,356 | INFO     | executing command: df -mP /tmp/job_11038855/atlas/pilot/slots/0
[2026-01-22 21:45:34] 2026-01-22 20:44:43,363 | INFO     | sufficient remaining disk space (223009046528 B)
[2026-01-22 21:45:34] 2026-01-22 20:44:43,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 21:45:34] 2026-01-22 20:44:43,363 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 21:45:34] 2026-01-22 20:44:43,363 | INFO     | update_server=False
[2026-01-22 21:45:34] 2026-01-22 20:44:43,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 21:45:34] 2026-01-22 20:44:43,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 21:45:34] 2026-01-22 20:44:43,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 21:45:34] 2026-01-22 20:44:43,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 21:45:34] 2026-01-22 20:44:43,511 | INFO     | all job control threads have been joined
[2026-01-22 21:45:34] 2026-01-22 20:44:43,536 | INFO     | all payload control threads have been joined
[2026-01-22 21:45:34] 2026-01-22 20:44:43,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 21:45:34] 2026-01-22 20:44:43,701 | INFO     | aborting loop
[2026-01-22 21:45:34] 2026-01-22 20:44:44,225 | INFO     | all data control threads have been joined
[2026-01-22 21:45:34] 2026-01-22 20:44:44,369 | INFO     | [job] retrieve thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,369 | INFO     | [job] queue monitor thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,516 | INFO     | [job] control thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,541 | INFO     | [payload] control thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,555 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,706 | INFO     | [job] job monitor thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,902 | INFO     | [payload] validate_post thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:44,934 | INFO     | [job] validate thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,160 | INFO     | [data] copytool_in thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,173 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,230 | INFO     | [data] control thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,244 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,369 | INFO     | [data] copytool_out thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,928 | INFO     | [payload] failed_post thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:45,933 | INFO     | job.realtimelogging is not enabled
[2026-01-22 21:45:34] 2026-01-22 20:44:46,938 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:44:47,369 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 21:45:34] 2026-01-22 20:45:13,417 | INFO     | PID=22853 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-22 21:45:34] 2026-01-22 20:45:13,418 | INFO     | .. there are 4 such processes running
[2026-01-22 21:45:34] 2026-01-22 20:45:13,418 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 21:45:34] 2026-01-22 20:45:13,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 21:45:34] 2026-01-22 20:45:13,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 21:45:34] 2026-01-22 20:45:18,550 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-22 21:45:34] 2026-01-22 20:45:27,427 | INFO     | [monitor] cgroup control has ended
[2026-01-22 21:45:34] 2026-01-22 20:45:29,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065283840)>']
[2026-01-22 21:45:34] 2026-01-22 20:45:29,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 21:45:34] 2026-01-22 20:45:29,497 | INFO     | [monitor] control thread has ended
[2026-01-22 21:45:34] 2026-01-22 20:45:34,203 | INFO     | all workflow threads have been joined
[2026-01-22 21:45:34] 2026-01-22 20:45:34,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 21:45:34] 2026-01-22 20:45:34,204 | INFO     | traces error code: 0
[2026-01-22 21:45:34] 2026-01-22 20:45:34,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 21:45:34] 2026-01-22 20:45:34,248 [wrapper] ==== pilot stdout END ====
[2026-01-22 21:45:34] 2026-01-22 20:45:34,250 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 21:45:34] 2026-01-22 20:45:34,251 [wrapper] pilotpid: 22853
[2026-01-22 21:45:34] 2026-01-22 20:45:34,252 [wrapper] Pilot exit status: 0
[2026-01-22 21:45:34] 2026-01-22 20:45:34,257 [wrapper] pandaids: 6978791079
[2026-01-22 21:45:34] 2026-01-22 20:45:34,281 [wrapper] cleanup supervisor_pilot   525 22854
[2026-01-22 21:45:34] 2026-01-22 20:45:34,282 [wrapper] Test setup, not cleaning
[2026-01-22 21:45:34] 2026-01-22 20:45:34,283 [wrapper] apfmon messages muted
[2026-01-22 21:45:34] 2026-01-22 20:45:34,285 [wrapper] ==== wrapper stdout END ====
[2026-01-22 21:45:34] 2026-01-22 20:45:34,286 [wrapper] ==== wrapper stderr END ====
[2026-01-22 21:45:34]  *** Error codes and diagnostics ***
[2026-01-22 21:45:34]     "exeErrorCode": 0,
[2026-01-22 21:45:34]     "exeErrorDiag": "",
[2026-01-22 21:45:34]     "pilotErrorCode": 0,
[2026-01-22 21:45:34]     "pilotErrorDiag": "",
[2026-01-22 21:45:34]  *** Listing of results directory ***
[2026-01-22 21:45:34] total 675504
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user    584422 Jan 21 22:48 pilot3.tar.gz
[2026-01-22 21:45:34] -rwx------ 1 mf493845 unix-user     36322 Jan 21 22:54 runpilot2-wrapper.sh
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      5111 Jan 21 22:54 queuedata.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       100 Jan 22 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 21:45:34] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 22 18:58 run_atlas
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       105 Jan 22 18:58 job.xml
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 22 20:30 start_atlas.sh
[2026-01-22 21:45:34] drwxrwx--x 2 mf493845 unix-user       100 Jan 22 20:30 shared
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user    597775 Jan 22 20:30 input.tar.gz
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      6390 Jan 22 20:30 init_data.xml
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user 362063474 Jan 22 20:30 EVNT.48313424._000010.pool.root.1
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user         0 Jan 22 20:30 boinc_setup_complete
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      8192 Jan 22 20:30 boinc_mmap_file
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user         0 Jan 22 20:30 boinc_lockfile
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      2639 Jan 22 20:30 pandaJob.out
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user   1002389 Jan 22 20:30 agis_schedconf.cvmfs.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user   1516246 Jan 22 20:30 agis_ddmendpoints.agis.ALL.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       414 Jan 22 20:30 workernode_map.json
[2026-01-22 21:45:34] drwx------ 5 mf493845 unix-user       440 Jan 22 20:30 pilot3
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user 323551206 Jan 22 21:44 HITS.48313427._000233.pool.root.1
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user        95 Jan 22 21:44 pilot_heartbeat.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      1014 Jan 22 21:44 memory_monitor_summary.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user    429291 Jan 22 21:44 log.48313427._000233.job.log.tgz.1
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      6301 Jan 22 21:44 heartbeat.json
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      4903 Jan 22 21:45 pilotlog.txt
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user    665230 Jan 22 21:45 log.48313427._000233.job.log.1
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       357 Jan 22 21:45 output.list
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       620 Jan 22 21:45 runtime_log
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user   1116160 Jan 22 21:45 result.tar.gz
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user      9219 Jan 22 21:45 runtime_log.err
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user       644 Jan 22 21:45 k85KDmUKv28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmblsKDmGU4qim.diag
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user     22109 Jan 22 21:45 stderr.txt
[2026-01-22 21:45:34] HITS file was successfully produced:
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user 323551206 Jan 22 21:44 shared/HITS.pool.root.1
[2026-01-22 21:45:34]  *** Contents of shared directory: ***
[2026-01-22 21:45:34] total 671240
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 22 20:30 start_atlas.sh
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user    597775 Jan 22 20:30 input.tar.gz
[2026-01-22 21:45:34] -rw-r--r-- 2 mf493845 unix-user 362063474 Jan 22 20:30 ATLAS.root_0
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user 323551206 Jan 22 21:44 HITS.pool.root.1
[2026-01-22 21:45:34] -rw------- 1 mf493845 unix-user   1116160 Jan 22 21:45 result.tar.gz
21:45:35 (17998): run_atlas exited; CPU time 33005.635991
21:45:35 (17998): called boinc_finish(0)

</stderr_txt>
]]>

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