Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
01:04:34 (796676): wrapper (7.7.26015): starting
01:04:34 (796676): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 01:04:34] Arguments: --nthreads 4
[2026-01-24 01:04:34] Threads: 4
[2026-01-24 01:04:34] Checking for CVMFS
[2026-01-24 01:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 01:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 01:04:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 01:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 01:04:34] 2.13.3.0 80730 5745 46440 155452 3 9 19577273 33554433 0 130560 0 2713857 99.989 165102 198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-24 01:04:34] CVMFS is ok
[2026-01-24 01:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 01:04:34] Checking for apptainer binary...
[2026-01-24 01:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 01:04:34] Running /usr/bin/apptainer --version
[2026-01-24 01:04:34] apptainer version 1.4.5
[2026-01-24 01:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 01:04:34] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-24 01:04:34] apptainer works
[2026-01-24 01:04:34] Set ATHENA_PROC_NUMBER=4
[2026-01-24 01:04:34] Set ATHENA_CORE_NUMBER=4
[2026-01-24 01:04:34] Starting ATLAS job with PandaID=6977522473
[2026-01-24 01:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 02:01:56]  *** The last 200 lines of the pilot log: ***
[2026-01-24 02:01:56]  direct_access_lan=False
[2026-01-24 02:01:56]  direct_access_wan=False
[2026-01-24 02:01:56]  domain=
[2026-01-24 02:01:56]  filesize=251908
[2026-01-24 02:01:56]  filetype=log
[2026-01-24 02:01:56]  guid=65ff4c31-c259-4913-99ab-9576b6c1679e
[2026-01-24 02:01:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-24 02:01:56]  is_altstaged=None
[2026-01-24 02:01:56]  is_tar=False
[2026-01-24 02:01:56]  lfn=log.48301086._006266.job.log.tgz.1
[2026-01-24 02:01:56]  mtime=0
[2026-01-24 02:01:56]  protocol_id=None
[2026-01-24 02:01:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 02:01:56]  replicas=None
[2026-01-24 02:01:56]  scope=mc23_13p6TeV
[2026-01-24 02:01:56]  status=None
[2026-01-24 02:01:56]  status_code=0
[2026-01-24 02:01:56]  storage_token=
[2026-01-24 02:01:56]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6977522473/log.48301086._006266.job.log.tgz.1
[2026-01-24 02:01:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/2a/log.48301086._006266.job.log.tgz.1
[2026-01-24 02:01:56]  workdir=None
[2026-01-24 02:01:56] ]
[2026-01-24 02:01:56] 2026-01-24 00:01:22,287 | INFO     | transferring file log.48301086._006266.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6977522473/log.48301086._006266.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-24 02:01:56] 2026-01-24 00:01:22,287 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6977522473/log.48301086._006266.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48301086._006266.job
[2026-01-24 02:01:56] 2026-01-24 00:01:22,295 | INFO     | adding to output.list: log.48301086._006266.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/2a/log.48301086._006266.job.log.tg
[2026-01-24 02:01:56] 2026-01-24 00:01:22,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 02:01:56] 2026-01-24 00:01:22,296 | INFO     | summary of transferred files:
[2026-01-24 02:01:56] 2026-01-24 00:01:22,296 | INFO     |  -- lfn=log.48301086._006266.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 02:01:56] 2026-01-24 00:01:22,296 | INFO     | stage-out finished correctly
[2026-01-24 02:01:56] 2026-01-24 00:01:22,324 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 02:01:56] 2026-01-24 00:01:23,546 | INFO     | job 6977522473 has state=finished
[2026-01-24 02:01:56] 2026-01-24 00:01:23,546 | INFO     | preparing for final server update for job 6977522473 in state='finished'
[2026-01-24 02:01:56] 2026-01-24 00:01:23,546 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6977522473/jobReport.json
[2026-01-24 02:01:56] 2026-01-24 00:01:23,547 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-24 02:01:56] 2026-01-24 00:01:23,547 | INFO     | this job has now completed (state=finished)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,547 | INFO     | log transfer has been attempted: DONE
[2026-01-24 02:01:56] 2026-01-24 00:01:23,548 | INFO     | job 6977522473 has finished - writing final server update
[2026-01-24 02:01:56] 2026-01-24 00:01:23,548 | INFO     | total number of processed events: 400 (read)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977522473/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | INFO     | extracted standard info from prmon json
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 02:01:56] 2026-01-24 00:01:23,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | fitting pss+swap vs Time
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | sum of square deviations: 36465800.0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | sum of deviations: -1412037943.0000002
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | mean x: 1769211270.0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | mean y: 2397182.7346938774
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | intersect: 68510244053.58953
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | chi2: 0.06128804019348087
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | current memory leak: -38.72 B/s (using 49 data points, chi2=0.06)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | could have reported an average CPU frequency of 4003 MHz (5 samples)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | ..............................
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . Timing measurements:
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . get job = 0 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . initial setup = 4 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . payload setup = 2 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . stage-in = 0 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . payload execution = 3379 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . stage-out = 0 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | . log creation = 0 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,551 | INFO     | ..............................
[2026-01-24 02:01:56] 2026-01-24 00:01:23,755 | INFO     | time since job start (3398s) is within the limit (349056.0s)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | 
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | job summary report
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | --------------------------------------------------
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | PanDA job id: 6977522473
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | task id: 48301086
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | errors: (none)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | pilot state: finished 
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | transexitcode: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | exeerrorcode: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | exeerrordiag: 
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | exitcode: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | exitmsg: OK
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | cpuconsumptiontime: 12561 s
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | nevents: 400
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | neventsw: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | pid: 805340
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | pgrp: 805340
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | corecount: 4
[2026-01-24 02:01:56] 2026-01-24 00:01:23,792 | INFO     | event service: False
[2026-01-24 02:01:56] 2026-01-24 00:01:23,793 | INFO     | sizes: {0: 2284237, 11: 2284237, 3386: 2318956, 3387: 2319126}
[2026-01-24 02:01:56] 2026-01-24 00:01:23,793 | INFO     | --------------------------------------------------
[2026-01-24 02:01:56] 2026-01-24 00:01:23,793 | INFO     | 
[2026-01-24 02:01:56] 2026-01-24 00:01:23,793 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,802 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 02:01:56] 2026-01-24 00:01:23,803 | INFO     | job 6977522473 has completed (purged errors)
[2026-01-24 02:01:56] 2026-01-24 00:01:23,803 | INFO     | overall cleanup function is called
[2026-01-24 02:01:56] 2026-01-24 00:01:24,809 | INFO     | --- collectZombieJob: --- 10, [805340]
[2026-01-24 02:01:56] 2026-01-24 00:01:24,809 | INFO     | zombie collector waiting for pid 805340
[2026-01-24 02:01:56] 2026-01-24 00:01:24,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 02:01:56] 2026-01-24 00:01:24,809 | INFO     | collected zombie processes
[2026-01-24 02:01:56] 2026-01-24 00:01:24,809 | INFO     | will attempt to kill all subprocesses of pid=805340
[2026-01-24 02:01:56] 2026-01-24 00:01:24,906 | INFO     | process IDs to be killed: [805340] (in reverse order)
[2026-01-24 02:01:56] 2026-01-24 00:01:24,945 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 02:01:56] 2026-01-24 00:01:24,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 02:01:56] 2026-01-24 00:01:24,948 | INFO     | did not find any defunct processes belonging to 805340
[2026-01-24 02:01:56] 2026-01-24 00:01:24,950 | INFO     | did not find any defunct processes belonging to 805340
[2026-01-24 02:01:56] 2026-01-24 00:01:24,950 | INFO     | ready for new job
[2026-01-24 02:01:56] 2026-01-24 00:01:24,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 02:01:56] 2026-01-24 00:01:24,951 | INFO     | **************************************
[2026-01-24 02:01:56] 2026-01-24 00:01:24,951 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 02:01:56] 2026-01-24 00:01:24,951 | INFO     | **************************************
[2026-01-24 02:01:56] 2026-01-24 00:01:24,951 | INFO     | 
[2026-01-24 02:01:56] 2026-01-24 00:01:24,952 | INFO     | architecture information:
[2026-01-24 02:01:56] 2026-01-24 00:01:24,952 | INFO     | executing command: cat /etc/os-release
[2026-01-24 02:01:56] 2026-01-24 00:01:24,959 | INFO     | cat /etc/os-release:
[2026-01-24 02:01:56] NAME="CentOS Linux"
[2026-01-24 02:01:56] VERSION="7 (Core)"
[2026-01-24 02:01:56] ID="centos"
[2026-01-24 02:01:56] ID_LIKE="rhel fedora"
[2026-01-24 02:01:56] VERSION_ID="7"
[2026-01-24 02:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 02:01:56] ANSI_COLOR="0;31"
[2026-01-24 02:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 02:01:56] HOME_URL="https://www.centos.org/"
[2026-01-24 02:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 02:01:56] 
[2026-01-24 02:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 02:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 02:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 02:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 02:01:56] 
[2026-01-24 02:01:56] 2026-01-24 00:01:24,959 | INFO     | **************************************
[2026-01-24 02:01:56] 2026-01-24 00:01:25,462 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-24 02:01:56] 2026-01-24 00:01:25,468 | INFO     | sufficient remaining disk space (65431142400 B)
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | INFO     | update_server=False
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 02:01:56] 2026-01-24 00:01:25,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 02:01:56] 2026-01-24 00:01:25,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 02:01:56] 2026-01-24 00:01:25,470 | INFO     | aborting loop
[2026-01-24 02:01:56] 2026-01-24 00:01:26,123 | INFO     | all data control threads have been joined
[2026-01-24 02:01:56] 2026-01-24 00:01:26,204 | INFO     | all payload control threads have been joined
[2026-01-24 02:01:56] 2026-01-24 00:01:26,474 | INFO     | [job] retrieve thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:26,475 | INFO     | [job] queue monitor thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:26,475 | INFO     | [job] job monitor thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:26,583 | INFO     | [data] copytool_in thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:26,704 | INFO     | all job control threads have been joined
[2026-01-24 02:01:56] 2026-01-24 00:01:27,086 | INFO     | [payload] failed_post thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,128 | INFO     | [data] control thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,209 | INFO     | [payload] control thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,352 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,475 | INFO     | [data] copytool_out thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,678 | INFO     | [payload] validate_post thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,706 | INFO     | [job] control thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,823 | INFO     | [job] validate thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,933 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:27,963 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:28,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 02:01:56] 2026-01-24 00:01:32,365 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:36,472 | INFO     | job.realtimelogging is not enabled
[2026-01-24 02:01:56] 2026-01-24 00:01:37,478 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 02:01:56] 2026-01-24 00:01:50,087 | INFO     | [monitor] cgroup control has ended
[2026-01-24 02:01:56] 2026-01-24 00:01:51,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324801255232)>', '<ExcThread(monitor, started 140324518508288)>']
[2026-01-24 02:01:56] 2026-01-24 00:01:51,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 02:01:56] 2026-01-24 00:01:51,599 | INFO     | [monitor] control thread has ended
[2026-01-24 02:01:56] 2026-01-24 00:01:56,440 | INFO     | all workflow threads have been joined
[2026-01-24 02:01:56] 2026-01-24 00:01:56,440 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 02:01:56] 2026-01-24 00:01:56,440 | INFO     | traces error code: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:56,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 02:01:56] 2026-01-24 00:01:56,492 [wrapper] ==== pilot stdout END ====
[2026-01-24 02:01:56] 2026-01-24 00:01:56,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 02:01:56] 2026-01-24 00:01:56,495 [wrapper] pilotpid: 800528
[2026-01-24 02:01:56] 2026-01-24 00:01:56,497 [wrapper] Pilot exit status: 0
[2026-01-24 02:01:56] 2026-01-24 00:01:56,506 [wrapper] pandaids: 6977522473
[2026-01-24 02:01:56] 2026-01-24 00:01:56,530 [wrapper] cleanup supervisor_pilot  838430 800529
[2026-01-24 02:01:56] 2026-01-24 00:01:56,532 [wrapper] Test setup, not cleaning
[2026-01-24 02:01:56] 2026-01-24 00:01:56,534 [wrapper] apfmon messages muted
[2026-01-24 02:01:56] 2026-01-24 00:01:56,535 [wrapper] ==== wrapper stdout END ====
[2026-01-24 02:01:56] 2026-01-24 00:01:56,537 [wrapper] ==== wrapper stderr END ====
[2026-01-24 02:01:56]  *** Error codes and diagnostics ***
[2026-01-24 02:01:56]     "exeErrorCode": 0,
[2026-01-24 02:01:56]     "exeErrorDiag": "",
[2026-01-24 02:01:56]     "pilotErrorCode": 0,
[2026-01-24 02:01:56]     "pilotErrorDiag": "",
[2026-01-24 02:01:56]  *** Listing of results directory ***
[2026-01-24 02:01:56] total 660652
[2026-01-24 02:01:56] -rw-r--r-- 1 ek ek    584422 Jan 22 12:24 pilot3.tar.gz
[2026-01-24 02:01:56] -rwx------ 1 ek ek     36322 Jan 22 12:25 runpilot2-wrapper.sh
[2026-01-24 02:01:56] -rw-r--r-- 1 ek ek      5111 Jan 22 12:25 queuedata.json
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek       100 Jan 24 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 02:01:56] -rwxr-xr-x 1 ek ek      7986 Jan 24 01:04 run_atlas
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek       105 Jan 24 01:04 job.xml
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek 490167950 Jan 24 01:04 EVNT.48301084._000126.pool.root.1
[2026-01-24 02:01:56] drwxrwx--x 2 ek ek      4096 Jan 24 01:04 shared
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek    597754 Jan 24 01:04 input.tar.gz
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek     15845 Jan 24 01:04 start_atlas.sh
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek         0 Jan 24 01:04 boinc_setup_complete
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek      9841 Jan 24 01:04 init_data.xml
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek         0 Jan 24 01:04 boinc_lockfile
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek      2519 Jan 24 01:04 pandaJob.out
[2026-01-24 02:01:56] -rw------- 1 ek ek        50 Jan 24 01:04 setup.sh.local
[2026-01-24 02:01:56] -rw------- 1 ek ek   1004238 Jan 24 01:04 agis_schedconf.cvmfs.json
[2026-01-24 02:01:56] -rw------- 1 ek ek   1516246 Jan 24 01:04 agis_ddmendpoints.agis.ALL.json
[2026-01-24 02:01:56] -rw------- 1 ek ek       432 Jan 24 01:04 workernode_map.json
[2026-01-24 02:01:56] drwx------ 5 ek ek      4096 Jan 24 01:04 pilot3
[2026-01-24 02:01:56] -rw------- 1 ek ek 180868110 Jan 24 02:01 HITS.48301086._006266.pool.root.1
[2026-01-24 02:01:56] -rw------- 1 ek ek        95 Jan 24 02:01 pilot_heartbeat.json
[2026-01-24 02:01:56] -rw------- 1 ek ek      1031 Jan 24 02:01 memory_monitor_summary.json
[2026-01-24 02:01:56] -rw------- 1 ek ek    251908 Jan 24 02:01 log.48301086._006266.job.log.tgz.1
[2026-01-24 02:01:56] -rw------- 1 ek ek      6330 Jan 24 02:01 heartbeat.json
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek        27 Jan 24 02:01 wrapper_checkpoint.txt
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek      8192 Jan 24 02:01 boinc_mmap_file
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek       530 Jan 24 02:01 boinc_task_state.xml
[2026-01-24 02:01:56] -rw------- 1 ek ek      4620 Jan 24 02:01 pilotlog.txt
[2026-01-24 02:01:56] -rw------- 1 ek ek    510984 Jan 24 02:01 log.48301086._006266.job.log.1
[2026-01-24 02:01:56] -rw------- 1 ek ek       357 Jan 24 02:01 output.list
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek       620 Jan 24 02:01 runtime_log
[2026-01-24 02:01:56] -rw------- 1 ek ek    778240 Jan 24 02:01 result.tar.gz
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek      9501 Jan 24 02:01 runtime_log.err
[2026-01-24 02:01:56] -rw------- 1 ek ek       666 Jan 24 02:01 fL7LDmi3628nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiJ0KDmOHsY4n.diag
[2026-01-24 02:01:56] -rw-rw-r-- 1 ek ek     20667 Jan 24 02:01 stderr.txt
[2026-01-24 02:01:56] HITS file was successfully produced:
[2026-01-24 02:01:56] -rw------- 1 ek ek 180868110 Jan 24 02:01 shared/HITS.pool.root.1
[2026-01-24 02:01:56]  *** Contents of shared directory: ***
[2026-01-24 02:01:56] total 656680
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek 490167950 Jan 24 01:04 ATLAS.root_0
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek    597754 Jan 24 01:04 input.tar.gz
[2026-01-24 02:01:56] -rw-r--r-- 2 ek ek     15845 Jan 24 01:04 start_atlas.sh
[2026-01-24 02:01:56] -rw------- 1 ek ek 180868110 Jan 24 02:01 HITS.pool.root.1
[2026-01-24 02:01:56] -rw------- 1 ek ek    778240 Jan 24 02:01 result.tar.gz
02:01:58 (796676): run_atlas exited; CPU time 12592.020082
02:01:58 (796676): called boinc_finish(0)

</stderr_txt>
]]>

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