Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
23:07:42 (688579): wrapper (7.7.26015): starting
23:07:42 (688579): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 23:07:42] Arguments: --nthreads 4
[2026-01-23 23:07:42] Threads: 4
[2026-01-23 23:07:42] Checking for CVMFS
[2026-01-23 23:07:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 23:07:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 23:07:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 23:07:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 23:07:43] 2.13.3.0 80730 5628 47964 155448 0 50 19547428 33554433 0 130560 0 2634940 99.989 158656 195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-23 23:07:43] CVMFS is ok
[2026-01-23 23:07:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 23:07:43] Checking for apptainer binary...
[2026-01-23 23:07:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 23:07:43] Running /usr/bin/apptainer --version
[2026-01-23 23:07:43] apptainer version 1.4.5
[2026-01-23 23:07:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 23:07:43] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-23 23:07:43] apptainer works
[2026-01-23 23:07:43] Set ATHENA_PROC_NUMBER=4
[2026-01-23 23:07:43] Set ATHENA_CORE_NUMBER=4
[2026-01-23 23:07:43] Starting ATLAS job with PandaID=6977506505
[2026-01-23 23:07:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 00:06:03]  *** The last 200 lines of the pilot log: ***
[2026-01-24 00:06:03]  mtime=0
[2026-01-24 00:06:03]  protocol_id=None
[2026-01-24 00:06:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 00:06:03]  replicas=None
[2026-01-24 00:06:03]  scope=mc23_13p6TeV
[2026-01-24 00:06:03]  status=None
[2026-01-24 00:06:03]  status_code=0
[2026-01-24 00:06:03]  storage_token=
[2026-01-24 00:06:03]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/log.48299549._000494.job.log.tgz.1
[2026-01-24 00:06:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/4b/log.48299549._000494.job.log.tgz.1
[2026-01-24 00:06:03]  workdir=None
[2026-01-24 00:06:03] ]
[2026-01-24 00:06:03] 2026-01-23 22:05:26,414 | INFO     | transferring file log.48299549._000494.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/log.48299549._000494.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-24 00:06:03] 2026-01-23 22:05:26,414 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/log.48299549._000494.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48299549._000494.job
[2026-01-24 00:06:03] 2026-01-23 22:05:26,423 | INFO     | adding to output.list: log.48299549._000494.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/4b/log.48299549._000494.job.log.tg
[2026-01-24 00:06:03] 2026-01-23 22:05:26,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 00:06:03] 2026-01-23 22:05:26,423 | INFO     | summary of transferred files:
[2026-01-24 00:06:03] 2026-01-23 22:05:26,423 | INFO     |  -- lfn=log.48299549._000494.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 00:06:03] 2026-01-23 22:05:26,424 | INFO     | stage-out finished correctly
[2026-01-24 00:06:03] 2026-01-23 22:05:27,185 | WARNING  | process 697222 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 00:06:03] 2026-01-23 22:05:27,185 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 00:06:03] 2026-01-23 22:05:27,233 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 00:06:03] 2026-01-23 22:05:27,309 | INFO     | number of running child processes to parent process 697222: 1
[2026-01-24 00:06:03] 2026-01-23 22:05:27,309 | INFO     | maximum number of monitored processes: 6
[2026-01-24 00:06:03] 2026-01-23 22:05:28,162 | INFO     | time since job start (3457s) is within the limit (349056.0s)
[2026-01-24 00:06:03] 2026-01-23 22:05:29,269 | INFO     | PID=692597 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 00:06:03] 2026-01-23 22:05:29,812 | INFO     | monitor loop #265: job 0:6977506505 is in state 'finished'
[2026-01-24 00:06:03] 2026-01-23 22:05:29,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,142 | INFO     | job 6977506505 has state=finished
[2026-01-24 00:06:03] 2026-01-23 22:05:30,143 | INFO     | preparing for final server update for job 6977506505 in state='finished'
[2026-01-24 00:06:03] 2026-01-23 22:05:30,143 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/jobReport.json
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | this job has now completed (state=finished)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | log transfer has been attempted: DONE
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | job 6977506505 has finished - writing final server update
[2026-01-24 00:06:03] 2026-01-23 22:05:30,144 | INFO     | total number of processed events: 400 (read)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977506505/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | INFO     | extracted standard info from prmon json
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | INFO     | fitting pss+swap vs Time
[2026-01-24 00:06:03] 2026-01-23 22:05:30,146 | INFO     | sum of square deviations: 38744912.5
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | sum of deviations: -1356630057.0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | mean x: 1769204286.5
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | mean y: 2412587.0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | intersect: 61950047958.20233
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | chi2: 0.06805001430926809
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | current memory leak: -35.01 B/s (using 50 data points, chi2=0.07)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | could have reported an average CPU frequency of 4267 MHz (5 samples)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | ..............................
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . Timing measurements:
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . get job = 0 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . initial setup = 3 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . payload setup = 2 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . stage-in = 0 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . payload execution = 3436 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . stage-out = 0 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | . log creation = 0 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,147 | INFO     | ..............................
[2026-01-24 00:06:03] 2026-01-23 22:05:30,270 | INFO     | time since job start (3459s) is within the limit (349056.0s)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | 
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | job summary report
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | --------------------------------------------------
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | PanDA job id: 6977506505
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | task id: 48299549
[2026-01-24 00:06:03] 2026-01-23 22:05:30,405 | INFO     | errors: (none)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | pilot state: finished 
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | transexitcode: 0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | exeerrorcode: 0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | exeerrordiag: 
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | exitcode: 0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | exitmsg: OK
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | cpuconsumptiontime: 12881 s
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | nevents: 400
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | neventsw: 0
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | pid: 697222
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | pgrp: 697222
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | corecount: 4
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | event service: False
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | sizes: {0: 2284334, 10: 2284334, 3443: 2310096, 3444: 2319094, 3445: 2319150, 3448: 2319376}
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | --------------------------------------------------
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | 
[2026-01-24 00:06:03] 2026-01-23 22:05:30,406 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | job 6977506505 has completed (purged errors)
[2026-01-24 00:06:03] 2026-01-23 22:05:30,416 | INFO     | overall cleanup function is called
[2026-01-24 00:06:03] 2026-01-23 22:05:31,422 | INFO     | --- collectZombieJob: --- 10, [697222]
[2026-01-24 00:06:03] 2026-01-23 22:05:31,423 | INFO     | zombie collector waiting for pid 697222
[2026-01-24 00:06:03] 2026-01-23 22:05:31,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 00:06:03] 2026-01-23 22:05:31,423 | INFO     | collected zombie processes
[2026-01-24 00:06:03] 2026-01-23 22:05:31,423 | INFO     | will attempt to kill all subprocesses of pid=697222
[2026-01-24 00:06:03] 2026-01-23 22:05:31,521 | INFO     | process IDs to be killed: [697222] (in reverse order)
[2026-01-24 00:06:03] 2026-01-23 22:05:31,554 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 00:06:03] 2026-01-23 22:05:31,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 00:06:03] 2026-01-23 22:05:31,558 | INFO     | did not find any defunct processes belonging to 697222
[2026-01-24 00:06:03] 2026-01-23 22:05:31,562 | INFO     | did not find any defunct processes belonging to 697222
[2026-01-24 00:06:03] 2026-01-23 22:05:31,562 | INFO     | ready for new job
[2026-01-24 00:06:03] 2026-01-23 22:05:31,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 00:06:03] 2026-01-23 22:05:31,563 | INFO     | **************************************
[2026-01-24 00:06:03] 2026-01-23 22:05:31,563 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 00:06:03] 2026-01-23 22:05:31,563 | INFO     | **************************************
[2026-01-24 00:06:03] 2026-01-23 22:05:31,563 | INFO     | 
[2026-01-24 00:06:03] 2026-01-23 22:05:31,564 | INFO     | architecture information:
[2026-01-24 00:06:03] 2026-01-23 22:05:31,564 | INFO     | executing command: cat /etc/os-release
[2026-01-24 00:06:03] 2026-01-23 22:05:31,571 | INFO     | cat /etc/os-release:
[2026-01-24 00:06:03] NAME="CentOS Linux"
[2026-01-24 00:06:03] VERSION="7 (Core)"
[2026-01-24 00:06:03] ID="centos"
[2026-01-24 00:06:03] ID_LIKE="rhel fedora"
[2026-01-24 00:06:03] VERSION_ID="7"
[2026-01-24 00:06:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 00:06:03] ANSI_COLOR="0;31"
[2026-01-24 00:06:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 00:06:03] HOME_URL="https://www.centos.org/"
[2026-01-24 00:06:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 00:06:03] 
[2026-01-24 00:06:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 00:06:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 00:06:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 00:06:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 00:06:03] 
[2026-01-24 00:06:03] 2026-01-23 22:05:31,571 | INFO     | **************************************
[2026-01-24 00:06:03] 2026-01-23 22:05:32,074 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | INFO     | sufficient remaining disk space (67758981120 B)
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | INFO     | update_server=False
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:06:03] 2026-01-23 22:05:32,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 00:06:03] 2026-01-23 22:05:32,081 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 00:06:03] 2026-01-23 22:05:32,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 00:06:03] 2026-01-23 22:05:32,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 00:06:03] 2026-01-23 22:05:32,271 | INFO     | all data control threads have been joined
[2026-01-24 00:06:03] 2026-01-23 22:05:32,315 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 00:06:03] 2026-01-23 22:05:32,315 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 00:06:03] 2026-01-23 22:05:32,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:06:03] 2026-01-23 22:05:32,315 | INFO     | will abort loop
[2026-01-24 00:06:03] 2026-01-23 22:05:32,924 | INFO     | all payload control threads have been joined
[2026-01-24 00:06:03] 2026-01-23 22:05:32,939 | INFO     | all job control threads have been joined
[2026-01-24 00:06:03] 2026-01-23 22:05:33,085 | INFO     | [job] retrieve thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,086 | INFO     | [job] queue monitor thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,181 | INFO     | [data] copytool_in thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 00:06:03] 2026-01-23 22:05:33,276 | INFO     | [data] control thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,320 | INFO     | [job] job monitor thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,469 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,929 | INFO     | [payload] control thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,941 | INFO     | [job] control thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:33,993 | INFO     | [payload] validate_post thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:34,083 | INFO     | [data] copytool_out thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:34,449 | INFO     | [job] validate thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:34,519 | INFO     | [payload] failed_post thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:34,526 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:34,567 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:37,273 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:42,887 | INFO     | job.realtimelogging is not enabled
[2026-01-24 00:06:03] 2026-01-23 22:05:43,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 00:06:03] 2026-01-23 22:05:56,684 | INFO     | [monitor] cgroup control has ended
[2026-01-24 00:06:03] 2026-01-23 22:05:57,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437193221952)>', '<ExcThread(monitor, started 140436919568128)>']
[2026-01-24 00:06:03] 2026-01-23 22:05:58,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 00:06:03] 2026-01-23 22:05:58,207 | INFO     | [monitor] control thread has ended
[2026-01-24 00:06:03] 2026-01-23 22:06:02,932 | INFO     | all workflow threads have been joined
[2026-01-24 00:06:03] 2026-01-23 22:06:02,932 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 00:06:03] 2026-01-23 22:06:02,933 | INFO     | traces error code: 0
[2026-01-24 00:06:03] 2026-01-23 22:06:02,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 00:06:03] 2026-01-23 22:06:02,979 [wrapper] ==== pilot stdout END ====
[2026-01-24 00:06:03] 2026-01-23 22:06:02,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 00:06:03] 2026-01-23 22:06:02,982 [wrapper] pilotpid: 692597
[2026-01-24 00:06:03] 2026-01-23 22:06:02,983 [wrapper] Pilot exit status: 0
[2026-01-24 00:06:03] 2026-01-23 22:06:02,988 [wrapper] pandaids: 6977506505
[2026-01-24 00:06:03] 2026-01-23 22:06:03,008 [wrapper] cleanup supervisor_pilot  730677 692598
[2026-01-24 00:06:03] 2026-01-23 22:06:03,010 [wrapper] Test setup, not cleaning
[2026-01-24 00:06:03] 2026-01-23 22:06:03,011 [wrapper] apfmon messages muted
[2026-01-24 00:06:03] 2026-01-23 22:06:03,013 [wrapper] ==== wrapper stdout END ====
[2026-01-24 00:06:03] 2026-01-23 22:06:03,014 [wrapper] ==== wrapper stderr END ====
[2026-01-24 00:06:03]  *** Error codes and diagnostics ***
[2026-01-24 00:06:03]     "exeErrorCode": 0,
[2026-01-24 00:06:03]     "exeErrorDiag": "",
[2026-01-24 00:06:03]     "pilotErrorCode": 0,
[2026-01-24 00:06:03]     "pilotErrorDiag": "",
[2026-01-24 00:06:03]  *** Listing of results directory ***
[2026-01-24 00:06:03] total 433500
[2026-01-24 00:06:03] -rw-r--r-- 1 ek ek      5111 Jan 22 07:10 queuedata.json
[2026-01-24 00:06:03] -rwx------ 1 ek ek     36322 Jan 22 07:10 runpilot2-wrapper.sh
[2026-01-24 00:06:03] -rw-r--r-- 1 ek ek    584422 Jan 22 07:10 pilot3.tar.gz
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek       100 Jan 23 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 00:06:03] -rwxr-xr-x 1 ek ek      7986 Jan 23 23:07 run_atlas
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek       105 Jan 23 23:07 job.xml
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek 260631830 Jan 23 23:07 EVNT.48299547._000020.pool.root.1
[2026-01-24 00:06:03] drwxrwx--x 2 ek ek      4096 Jan 23 23:07 shared
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek    597767 Jan 23 23:07 input.tar.gz
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek     15845 Jan 23 23:07 start_atlas.sh
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek         0 Jan 23 23:07 boinc_setup_complete
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek      9841 Jan 23 23:07 init_data.xml
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek         0 Jan 23 23:07 boinc_lockfile
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek      2629 Jan 23 23:07 pandaJob.out
[2026-01-24 00:06:03] -rw------- 1 ek ek        50 Jan 23 23:07 setup.sh.local
[2026-01-24 00:06:03] -rw------- 1 ek ek   1004254 Jan 23 23:07 agis_schedconf.cvmfs.json
[2026-01-24 00:06:03] -rw------- 1 ek ek   1516246 Jan 23 23:07 agis_ddmendpoints.agis.ALL.json
[2026-01-24 00:06:03] -rw------- 1 ek ek       432 Jan 23 23:07 workernode_map.json
[2026-01-24 00:06:03] drwx------ 5 ek ek      4096 Jan 23 23:07 pilot3
[2026-01-24 00:06:03] -rw------- 1 ek ek 177763856 Jan 24 00:05 HITS.48299549._000494.pool.root.1
[2026-01-24 00:06:03] -rw------- 1 ek ek        95 Jan 24 00:05 pilot_heartbeat.json
[2026-01-24 00:06:03] -rw------- 1 ek ek      1033 Jan 24 00:05 memory_monitor_summary.json
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek       529 Jan 24 00:05 boinc_task_state.xml
[2026-01-24 00:06:03] -rw------- 1 ek ek    255839 Jan 24 00:05 log.48299549._000494.job.log.tgz.1
[2026-01-24 00:06:03] -rw------- 1 ek ek      6330 Jan 24 00:05 heartbeat.json
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek      8192 Jan 24 00:05 boinc_mmap_file
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek        27 Jan 24 00:05 wrapper_checkpoint.txt
[2026-01-24 00:06:03] -rw------- 1 ek ek      4806 Jan 24 00:06 pilotlog.txt
[2026-01-24 00:06:03] -rw------- 1 ek ek    520267 Jan 24 00:06 log.48299549._000494.job.log.1
[2026-01-24 00:06:03] -rw------- 1 ek ek       357 Jan 24 00:06 output.list
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek       620 Jan 24 00:06 runtime_log
[2026-01-24 00:06:03] -rw------- 1 ek ek    798720 Jan 24 00:06 result.tar.gz
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek      9501 Jan 24 00:06 runtime_log.err
[2026-01-24 00:06:03] -rw------- 1 ek ek       664 Jan 24 00:06 d97LDma8128nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzrzKDmcgpSLo.diag
[2026-01-24 00:06:03] -rw-rw-r-- 1 ek ek     21551 Jan 24 00:06 stderr.txt
[2026-01-24 00:06:03] HITS file was successfully produced:
[2026-01-24 00:06:03] -rw------- 1 ek ek 177763856 Jan 24 00:05 shared/HITS.pool.root.1
[2026-01-24 00:06:03]  *** Contents of shared directory: ***
[2026-01-24 00:06:03] total 429512
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek 260631830 Jan 23 23:07 ATLAS.root_0
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek    597767 Jan 23 23:07 input.tar.gz
[2026-01-24 00:06:03] -rw-r--r-- 2 ek ek     15845 Jan 23 23:07 start_atlas.sh
[2026-01-24 00:06:03] -rw------- 1 ek ek 177763856 Jan 24 00:05 HITS.pool.root.1
[2026-01-24 00:06:03] -rw------- 1 ek ek    798720 Jan 24 00:06 result.tar.gz
00:06:04 (688579): run_atlas exited; CPU time 12914.629458
00:06:04 (688579): called boinc_finish(0)

</stderr_txt>
]]>

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