Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:41:27 (3373885): wrapper (7.7.26015): starting
00:41:27 (3373885): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 00:41:27] Arguments: --nthreads 4
[2026-01-24 00:41:27] Threads: 4
[2026-01-24 00:41:27] Checking for CVMFS
[2026-01-24 00:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 00:41:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 00:41:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 00:41:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 00:41:33] 2.13.3.0 897907 4009 56388 155431 1 52 3368453 6144001 2733 130560 0 5653010 99.963 304436 115 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-24 00:41:33] CVMFS is ok
[2026-01-24 00:41:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 00:41:33] Checking for apptainer binary...
[2026-01-24 00:41:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 00:41:33] Running /usr/bin/apptainer --version
[2026-01-24 00:41:33] apptainer version 1.4.0
[2026-01-24 00:41:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 00:41:33] Zen
[2026-01-24 00:41:33] apptainer works
[2026-01-24 00:41:33] Set ATHENA_PROC_NUMBER=4
[2026-01-24 00:41:33] Set ATHENA_CORE_NUMBER=4
[2026-01-24 00:41:33] Starting ATLAS job with PandaID=6970191170
[2026-01-24 00:41:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 01:54:22]  *** The last 200 lines of the pilot log: ***
[2026-01-24 01:54:22] 2026-01-23 14:53:37,604 | INFO     | transferring file log.48215263._042347.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6970191170/log.48215263._042347.job.log.tgz.1 to /home/mich
[2026-01-24 01:54:22] 2026-01-23 14:53:37,604 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6970191170/log.48215263._042347.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/1/lo
[2026-01-24 01:54:22] 2026-01-23 14:53:37,620 | INFO     | adding to output.list: log.48215263._042347.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/db/log.48215263._042347.job.log.tg
[2026-01-24 01:54:22] 2026-01-23 14:53:37,620 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 01:54:22] 2026-01-23 14:53:37,620 | INFO     | summary of transferred files:
[2026-01-24 01:54:22] 2026-01-23 14:53:37,620 | INFO     |  -- lfn=log.48215263._042347.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 01:54:22] 2026-01-23 14:53:37,621 | INFO     | stage-out finished correctly
[2026-01-24 01:54:22] 2026-01-23 14:53:38,195 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 01:54:22] 2026-01-23 14:53:38,864 | INFO     | time since job start (4302s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:39,199 | INFO     | monitor loop #325: job 0:6970191170 is in state 'finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:39,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 01:54:22] 2026-01-23 14:53:40,091 | INFO     | job 6970191170 has state=finished
[2026-01-24 01:54:22] 2026-01-23 14:53:40,091 | INFO     | preparing for final server update for job 6970191170 in state='finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:40,091 | INFO     | this job has now completed (state=finished)
[2026-01-24 01:54:22] 2026-01-23 14:53:40,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 01:54:22] 2026-01-23 14:53:40,092 | INFO     | log transfer has been attempted: DONE
[2026-01-24 01:54:22] 2026-01-23 14:53:40,092 | INFO     | job 6970191170 has finished - writing final server update
[2026-01-24 01:54:22] 2026-01-23 14:53:40,092 | INFO     | total number of processed events: 400 (read)
[2026-01-24 01:54:22] 2026-01-23 14:53:40,094 | INFO     | executing command: lscpu
[2026-01-24 01:54:22] 2026-01-23 14:53:40,118 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-24 01:54:22] 2026-01-23 14:53:40,869 | INFO     | time since job start (4304s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:41,702 | INFO     | monitor loop #326: job 0:6970191170 is in state 'finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:41,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 01:54:22] 2026-01-23 14:53:42,874 | INFO     | time since job start (4306s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:44,022 | INFO     | PID=3378059 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 01:54:22] 2026-01-23 14:53:44,023 | INFO     | .. there are 4 such processes running
[2026-01-24 01:54:22] 2026-01-23 14:53:44,205 | INFO     | monitor loop #327: job 0:6970191170 is in state 'finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:44,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 01:54:22] 2026-01-23 14:53:45,023 | INFO     | time since job start (4309s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:46,708 | INFO     | monitor loop #328: job 0:6970191170 is in state 'finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:46,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 01:54:22] 2026-01-23 14:53:47,028 | INFO     | time since job start (4311s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,033 | INFO     | time since job start (4313s) is within the limit (349056.0s)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,211 | INFO     | monitor loop #329: job 0:6970191170 is in state 'finished'
[2026-01-24 01:54:22] 2026-01-23 14:53:49,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,760 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-24 01:54:22] 2026-01-23 14:53:49,763 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4037.626333333333
[2026-01-24 01:54:22] 2026-01-23 14:53:49,766 | INFO     | using path: /home/michael/Boinc/BOINC/slots/1/PanDA_Pilot-6970191170/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,767 | INFO     | extracted standard info from prmon json
[2026-01-24 01:54:22] 2026-01-23 14:53:49,767 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 01:54:22] 2026-01-23 14:53:49,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 01:54:22] 2026-01-23 14:53:49,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 01:54:22] 2026-01-23 14:53:49,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 01:54:22] 2026-01-23 14:53:49,768 | INFO     | fitting pss+swap vs Time
[2026-01-24 01:54:22] 2026-01-23 14:53:49,768 | INFO     | sum of square deviations: 81266640.0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | sum of deviations: -7502147403.0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | mean x: 1769177964.5
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | mean y: 2413701.53125
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | intersect: 163324459153.6196
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | chi2: 0.1309328866508927
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | current memory leak: -92.32 B/s (using 64 data points, chi2=0.13)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | could have reported an average CPU frequency of 4058 MHz (6 samples)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | ..............................
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | . Timing measurements:
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | . get job = 0 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | . initial setup = 6 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | . payload setup = 4 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,769 | INFO     | . stage-in = 0 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,770 | INFO     | . payload execution = 4279 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,770 | INFO     | . stage-out = 0 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,770 | INFO     | . log creation = 0 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,770 | INFO     | ..............................
[2026-01-24 01:54:22] 2026-01-23 14:53:49,815 | INFO     | 
[2026-01-24 01:54:22] 2026-01-23 14:53:49,815 | INFO     | job summary report
[2026-01-24 01:54:22] 2026-01-23 14:53:49,815 | INFO     | --------------------------------------------------
[2026-01-24 01:54:22] 2026-01-23 14:53:49,815 | INFO     | PanDA job id: 6970191170
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | task id: 48215263
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | errors: (none)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | pilot state: finished 
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | transexitcode: 0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | exeerrorcode: 0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | exeerrordiag: 
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | exitcode: 0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | exitmsg: OK
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | cpuconsumptiontime: 15994 s
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | nevents: 400
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | neventsw: 0
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | pid: 3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | pgrp: 3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | corecount: 4
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | event service: False
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | sizes: {0: 2283963, 1: 2283963, 3: 2284253, 11: 2284281, 4287: 2319454, 4288: 2319454, 4300: 2319776}
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | --------------------------------------------------
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | 
[2026-01-24 01:54:22] 2026-01-23 14:53:49,816 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/1
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | job 6970191170 has completed (purged errors)
[2026-01-24 01:54:22] 2026-01-23 14:53:49,833 | INFO     | overall cleanup function is called
[2026-01-24 01:54:22] 2026-01-23 14:53:50,840 | INFO     | --- collectZombieJob: --- 10, [3384652]
[2026-01-24 01:54:22] 2026-01-23 14:53:50,840 | INFO     | zombie collector waiting for pid 3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:50,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 01:54:22] 2026-01-23 14:53:50,840 | INFO     | collected zombie processes
[2026-01-24 01:54:22] 2026-01-23 14:53:50,840 | INFO     | will attempt to kill all subprocesses of pid=3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:50,969 | INFO     | process IDs to be killed: [3384652] (in reverse order)
[2026-01-24 01:54:22] 2026-01-23 14:53:51,029 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 01:54:22] 2026-01-23 14:53:51,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 01:54:22] 2026-01-23 14:53:51,064 | INFO     | did not find any defunct processes belonging to 3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:51,068 | INFO     | did not find any defunct processes belonging to 3384652
[2026-01-24 01:54:22] 2026-01-23 14:53:51,068 | INFO     | ready for new job
[2026-01-24 01:54:22] 2026-01-23 14:53:51,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 01:54:22] 2026-01-23 14:53:51,069 | INFO     | ***************************************
[2026-01-24 01:54:22] 2026-01-23 14:53:51,069 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-24 01:54:22] 2026-01-23 14:53:51,069 | INFO     | ***************************************
[2026-01-24 01:54:22] 2026-01-23 14:53:51,069 | INFO     | 
[2026-01-24 01:54:22] 2026-01-23 14:53:51,071 | INFO     | architecture information:
[2026-01-24 01:54:22] 2026-01-23 14:53:51,071 | INFO     | executing command: cat /etc/os-release
[2026-01-24 01:54:22] 2026-01-23 14:53:51,085 | INFO     | cat /etc/os-release:
[2026-01-24 01:54:22] NAME="CentOS Linux"
[2026-01-24 01:54:22] VERSION="7 (Core)"
[2026-01-24 01:54:22] ID="centos"
[2026-01-24 01:54:22] ID_LIKE="rhel fedora"
[2026-01-24 01:54:22] VERSION_ID="7"
[2026-01-24 01:54:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 01:54:22] ANSI_COLOR="0;31"
[2026-01-24 01:54:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 01:54:22] HOME_URL="https://www.centos.org/"
[2026-01-24 01:54:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 01:54:22] 
[2026-01-24 01:54:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 01:54:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 01:54:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 01:54:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 01:54:22] 
[2026-01-24 01:54:22] 2026-01-23 14:53:51,086 | INFO     | ***************************************
[2026-01-24 01:54:22] 2026-01-23 14:53:51,589 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/1
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | INFO     | sufficient remaining disk space (197343051776 B)
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | INFO     | update_server=False
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 01:54:22] 2026-01-23 14:53:51,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 01:54:22] 2026-01-23 14:53:51,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 01:54:22] 2026-01-23 14:53:51,713 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 01:54:22] 2026-01-23 14:53:51,713 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 01:54:22] 2026-01-23 14:53:51,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 01:54:22] 2026-01-23 14:53:51,713 | INFO     | will abort loop
[2026-01-24 01:54:22] 2026-01-23 14:53:52,612 | INFO     | [job] retrieve thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:52,613 | INFO     | [job] queue monitor thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:52,632 | INFO     | all job control threads have been joined
[2026-01-24 01:54:22] 2026-01-23 14:53:52,649 | INFO     | all data control threads have been joined
[2026-01-24 01:54:22] 2026-01-23 14:53:52,718 | INFO     | [job] job monitor thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:52,814 | INFO     | all payload control threads have been joined
[2026-01-24 01:54:22] 2026-01-23 14:53:52,946 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,266 | INFO     | [job] validate thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 01:54:22] 2026-01-23 14:53:53,453 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,555 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,576 | INFO     | [payload] failed_post thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,591 | INFO     | [data] copytool_in thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,613 | INFO     | [data] copytool_out thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,637 | INFO     | [job] control thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,654 | INFO     | [data] control thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:53,819 | INFO     | [payload] control thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:54,144 | INFO     | [payload] validate_post thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:53:57,274 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:54:01,975 | INFO     | job.realtimelogging is not enabled
[2026-01-24 01:54:22] 2026-01-23 14:54:02,767 | INFO     | [monitor] cgroup control has ended
[2026-01-24 01:54:22] 2026-01-23 14:54:02,980 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 01:54:22] 2026-01-23 14:54:03,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956103743296)>', '<ExcThread(monitor, started 139955823150848)>']
[2026-01-24 01:54:22] 2026-01-23 14:54:08,383 | INFO     | all workflow threads have been joined
[2026-01-24 01:54:22] 2026-01-23 14:54:08,383 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 01:54:22] 2026-01-23 14:54:08,383 | INFO     | traces error code: 0
[2026-01-24 01:54:22] 2026-01-23 14:54:08,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | INFO     | PID=3378059 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | INFO     | .. there are 4 such processes running
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 01:54:22] 2026-01-23 14:54:22,240 | INFO     | [monitor] control thread has ended
[2026-01-24 01:54:22] 2026-01-23 14:54:22,316 [wrapper] ==== pilot stdout END ====
[2026-01-24 01:54:22] 2026-01-23 14:54:22,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 01:54:22] 2026-01-23 14:54:22,321 [wrapper] pilotpid: 3378059
[2026-01-24 01:54:22] 2026-01-23 14:54:22,323 [wrapper] Pilot exit status: 0
[2026-01-24 01:54:22] 2026-01-23 14:54:22,332 [wrapper] pandaids: 6970191170
[2026-01-24 01:54:22] 2026-01-23 14:54:22,372 [wrapper] cleanup supervisor_pilot 3422245 3378060
[2026-01-24 01:54:22] 2026-01-23 14:54:22,375 [wrapper] Test setup, not cleaning
[2026-01-24 01:54:22] 2026-01-23 14:54:22,377 [wrapper] apfmon messages muted
[2026-01-24 01:54:22] 2026-01-23 14:54:22,379 [wrapper] ==== wrapper stdout END ====
[2026-01-24 01:54:22] 2026-01-23 14:54:22,381 [wrapper] ==== wrapper stderr END ====
[2026-01-24 01:54:22]  *** Error codes and diagnostics ***
[2026-01-24 01:54:22]     "exeErrorCode": 0,
[2026-01-24 01:54:22]     "exeErrorDiag": "",
[2026-01-24 01:54:22]     "pilotErrorCode": 0,
[2026-01-24 01:54:22]     "pilotErrorDiag": "",
[2026-01-24 01:54:22]  *** Listing of results directory ***
[2026-01-24 01:54:22] total 743692
[2026-01-24 01:54:22] -rw-r--r-- 1 michael michael      5112 Jan 15 14:00 queuedata.json
[2026-01-24 01:54:22] -rw-r--r-- 1 michael michael    579449 Jan 15 14:00 pilot3.tar.gz
[2026-01-24 01:54:22] -rwx------ 1 michael michael     36322 Jan 15 14:00 runpilot2-wrapper.sh
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael       100 Jan 24 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 01:54:22] -rwxr-xr-x 1 michael michael      7986 Jan 24 00:41 run_atlas
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael       105 Jan 24 00:41 job.xml
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael 600189470 Jan 24 00:41 EVNT.32794306._001687.pool.root.1
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael      9823 Jan 24 00:41 init_data.xml
[2026-01-24 01:54:22] drwxrwx--x 2 michael michael      4096 Jan 24 00:41 shared
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael    592402 Jan 24 00:41 input.tar.gz
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael     15847 Jan 24 00:41 start_atlas.sh
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael         0 Jan 24 00:41 boinc_lockfile
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael      2509 Jan 24 00:41 pandaJob.out
[2026-01-24 01:54:22] -rw------- 1 michael michael        50 Jan 24 00:41 setup.sh.local
[2026-01-24 01:54:22] -rw------- 1 michael michael   1004198 Jan 24 00:41 agis_schedconf.cvmfs.json
[2026-01-24 01:54:22] -rw------- 1 michael michael   1516246 Jan 24 00:41 agis_ddmendpoints.agis.ALL.json
[2026-01-24 01:54:22] drwx------ 5 michael michael      4096 Jan 24 00:41 pilot3
[2026-01-24 01:54:22] -rw------- 1 michael michael 155584360 Jan 24 01:53 HITS.48215263._042347.pool.root.1
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael       530 Jan 24 01:53 boinc_task_state.xml
[2026-01-24 01:54:22] -rw------- 1 michael michael        95 Jan 24 01:53 pilot_heartbeat.json
[2026-01-24 01:54:22] -rw------- 1 michael michael      1024 Jan 24 01:53 memory_monitor_summary.json
[2026-01-24 01:54:22] -rw------- 1 michael michael    258300 Jan 24 01:53 log.48215263._042347.job.log.tgz.1
[2026-01-24 01:54:22] -rw------- 1 michael michael      7731 Jan 24 01:53 heartbeat.json
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael      8192 Jan 24 01:54 boinc_mmap_file
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael        27 Jan 24 01:54 wrapper_checkpoint.txt
[2026-01-24 01:54:22] -rw------- 1 michael michael       822 Jan 24 01:54 pilotlog.txt
[2026-01-24 01:54:22] -rw------- 1 michael michael    656872 Jan 24 01:54 log.48215263._042347.job.log.1
[2026-01-24 01:54:22] -rw------- 1 michael michael       357 Jan 24 01:54 output.list
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael       620 Jan 24 01:54 runtime_log
[2026-01-24 01:54:22] -rw------- 1 michael michael    931840 Jan 24 01:54 result.tar.gz
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael      9445 Jan 24 01:54 runtime_log.err
[2026-01-24 01:54:22] -rw------- 1 michael michael       641 Jan 24 01:54 BjFNDmImS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRWnKDmXwcLYo.diag
[2026-01-24 01:54:22] -rw-rw-r-- 1 michael michael     22276 Jan 24 01:54 stderr.txt
[2026-01-24 01:54:22] HITS file was successfully produced:
[2026-01-24 01:54:22] -rw------- 1 michael michael 155584360 Jan 24 01:53 shared/HITS.pool.root.1
[2026-01-24 01:54:22]  *** Contents of shared directory: ***
[2026-01-24 01:54:22] total 739580
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael 600189470 Jan 24 00:41 ATLAS.root_0
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael    592402 Jan 24 00:41 input.tar.gz
[2026-01-24 01:54:22] -rw-r--r-- 2 michael michael     15847 Jan 24 00:41 start_atlas.sh
[2026-01-24 01:54:22] -rw------- 1 michael michael 155584360 Jan 24 01:53 HITS.pool.root.1
[2026-01-24 01:54:22] -rw------- 1 michael michael    931840 Jan 24 01:54 result.tar.gz
01:54:24 (3373885): run_atlas exited; CPU time 16040.344137
01:54:24 (3373885): called boinc_finish(0)

</stderr_txt>
]]>

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