Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:15:49 (465848): wrapper (7.7.26015): starting
23:15:49 (465848): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 23:15:49] Arguments: --nthreads 3
[2026-01-22 23:15:49] Threads: 3
[2026-01-22 23:15:49] Checking for CVMFS
[2026-01-22 23:15:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 23:15:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 23:15:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 23:15:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 23:15:50] 2.9.2.0 10102 3136 70984 155411 0 49 20255861 36864001 0 130560 0 1310938 99.851 265657 953 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 23:15:50] CVMFS is ok
[2026-01-22 23:15:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 23:15:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 23:15:50] Further information can be found at the LHC@home message board.
[2026-01-22 23:15:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 23:15:50] Checking for apptainer binary...
[2026-01-22 23:15:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 23:15:50] Running /usr/bin/apptainer --version
[2026-01-22 23:15:50] apptainer version 1.3.6-6.1
[2026-01-22 23:15:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 23:15:50] atlasA226
[2026-01-22 23:15:50] apptainer works
[2026-01-22 23:15:50] Set ATHENA_PROC_NUMBER=3
[2026-01-22 23:15:50] Set ATHENA_CORE_NUMBER=3
[2026-01-22 23:15:50] Starting ATLAS job with PandaID=6977488623
[2026-01-22 23:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 01:03:22]  *** The last 200 lines of the pilot log: ***
[2026-01-23 01:03:22] 2026-01-23 00:02:31,206 | INFO     | job 6977488623 has finished - writing final server update
[2026-01-23 01:03:22] 2026-01-23 00:02:31,207 | INFO     | total number of processed events: 400 (read)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6977488623/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | INFO     | extracted standard info from prmon json
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 01:03:22] 2026-01-23 00:02:31,208 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | fitting pss+swap vs Time
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | sum of square deviations: 358927660.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | sum of deviations: -12054458514.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | mean x: 1769123361.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | mean y: 2405447.3714285716
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | intersect: 59417787815.29133
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | chi2: 2.344700326877468
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | sum of square deviations: 310052325.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | sum of deviations: -4349712360.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | mean x: 1769123208.5
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | mean y: 2428699.6
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | intersect: 24821391390.414547
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | chi2: 1.5665765729534609
[2026-01-23 01:03:22] 2026-01-23 00:02:31,209 | INFO     | current chi2=1.5665765729534609 (change=33.18649061478428 %)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | sum of square deviations: 265828240.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | sum of deviations: -3356993419.000002
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | mean x: 1769123056.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | mean y: 2432125.610526316
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | intersect: 22343679452.80636
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | chi2: 1.568990288771781
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | current chi2=1.568990288771781 (change=-0.15407582750772297 %)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | right removable region: 94
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | sum of square deviations: 310052325.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | sum of deviations: -25129722229.499992
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | mean x: 1769123513.5
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | mean y: 2445054.59
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | intersect: 143389799056.63492
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | chi2: 0.8995814727586314
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | current chi2=0.8995814727586314 (change=61.63341376948412 %)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,210 | INFO     | sum of square deviations: 265828240.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | sum of deviations: -22685177150.000004
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | mean x: 1769123666.0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | mean y: 2436631.957894737
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | intersect: 150975424917.42914
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | chi2: 0.9000408615249795
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | current chi2=0.9000408615249795 (change=-0.05106694393553397 %)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | left removable region: 20
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | sum of square deviations: 125630262.5
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | sum of deviations: -10004791444.5
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | mean x: 1769123635.5
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | mean y: 2452504.1756756757
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | intersect: 140889788568.7098
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | chi2: 0.06297754030404747
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | current memory leak: -79.64 B/s (using 74 data points, chi2=0.06)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | could have reported an average CPU frequency of 4369 MHz (7 samples)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | ..............................
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . Timing measurements:
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . get job = 0 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . initial setup = 6 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . payload setup = 6 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . stage-in = 0 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . payload execution = 6359 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . stage-out = 0 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,211 | INFO     | . log creation = 0 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,212 | INFO     | ..............................
[2026-01-23 01:03:22] 2026-01-23 00:02:31,440 | INFO     | 
[2026-01-23 01:03:22] 2026-01-23 00:02:31,440 | INFO     | job summary report
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | --------------------------------------------------
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | PanDA job id: 6977488623
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | task id: 48298619
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | errors: (none)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | pilot state: finished 
[2026-01-23 01:03:22] 2026-01-23 00:02:31,441 | INFO     | transexitcode: 0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | exeerrorcode: 0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | exeerrordiag: 
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | exitcode: 0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | exitmsg: OK
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | cpuconsumptiontime: 18460 s
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | nevents: 400
[2026-01-23 01:03:22] 2026-01-23 00:02:31,442 | INFO     | neventsw: 0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | pid: 474338
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | pgrp: 474338
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | corecount: 3
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | event service: False
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | sizes: {0: 2284352, 11: 2284352, 6369: 2320472, 6371: 2320694}
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | --------------------------------------------------
[2026-01-23 01:03:22] 2026-01-23 00:02:31,443 | INFO     | 
[2026-01-23 01:03:22] 2026-01-23 00:02:31,444 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-23 01:03:22] 2026-01-23 00:02:31,490 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,493 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 01:03:22] 2026-01-23 00:02:31,494 | INFO     | job 6977488623 has completed (purged errors)
[2026-01-23 01:03:22] 2026-01-23 00:02:31,494 | INFO     | overall cleanup function is called
[2026-01-23 01:03:22] 2026-01-23 00:02:32,503 | INFO     | --- collectZombieJob: --- 10, [474338]
[2026-01-23 01:03:22] 2026-01-23 00:02:32,503 | INFO     | zombie collector waiting for pid 474338
[2026-01-23 01:03:22] 2026-01-23 00:02:32,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 01:03:22] 2026-01-23 00:02:32,504 | INFO     | collected zombie processes
[2026-01-23 01:03:22] 2026-01-23 00:02:32,504 | INFO     | will attempt to kill all subprocesses of pid=474338
[2026-01-23 01:03:22] 2026-01-23 00:02:32,544 | INFO     | process IDs to be killed: [474338] (in reverse order)
[2026-01-23 01:03:22] 2026-01-23 00:02:32,570 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 01:03:22] 2026-01-23 00:02:32,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 01:03:22] 2026-01-23 00:02:32,572 | INFO     | did not find any defunct processes belonging to 474338
[2026-01-23 01:03:22] 2026-01-23 00:02:32,572 | INFO     | did not find any defunct processes belonging to 474338
[2026-01-23 01:03:22] 2026-01-23 00:02:32,572 | INFO     | ready for new job
[2026-01-23 01:03:22] 2026-01-23 00:02:32,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 01:03:22] 2026-01-23 00:02:32,573 | INFO     | **************************************
[2026-01-23 01:03:22] 2026-01-23 00:02:32,573 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 01:03:22] 2026-01-23 00:02:32,573 | INFO     | **************************************
[2026-01-23 01:03:22] 2026-01-23 00:02:32,573 | INFO     | 
[2026-01-23 01:03:22] 2026-01-23 00:02:32,574 | INFO     | architecture information:
[2026-01-23 01:03:22] 2026-01-23 00:02:32,574 | INFO     | executing command: cat /etc/os-release
[2026-01-23 01:03:22] 2026-01-23 00:02:32,584 | INFO     | cat /etc/os-release:
[2026-01-23 01:03:22] NAME="CentOS Linux"
[2026-01-23 01:03:22] VERSION="7 (Core)"
[2026-01-23 01:03:22] ID="centos"
[2026-01-23 01:03:22] ID_LIKE="rhel fedora"
[2026-01-23 01:03:22] VERSION_ID="7"
[2026-01-23 01:03:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 01:03:22] ANSI_COLOR="0;31"
[2026-01-23 01:03:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 01:03:22] HOME_URL="https://www.centos.org/"
[2026-01-23 01:03:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 01:03:22] 
[2026-01-23 01:03:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 01:03:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 01:03:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 01:03:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 01:03:22] 
[2026-01-23 01:03:22] 2026-01-23 00:02:32,584 | INFO     | **************************************
[2026-01-23 01:03:22] 2026-01-23 00:02:33,087 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | INFO     | sufficient remaining disk space (335765569536 B)
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | INFO     | update_server=False
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 01:03:22] 2026-01-23 00:02:33,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 01:03:22] 2026-01-23 00:02:33,292 | INFO     | all data control threads have been joined
[2026-01-23 01:03:22] 2026-01-23 00:02:33,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 01:03:22] 2026-01-23 00:02:33,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 01:03:22] 2026-01-23 00:02:33,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:03:22] 2026-01-23 00:02:33,437 | INFO     | will abort loop
[2026-01-23 01:03:22] 2026-01-23 00:02:33,595 | INFO     | all payload control threads have been joined
[2026-01-23 01:03:22] 2026-01-23 00:02:34,105 | INFO     | [job] retrieve thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,106 | INFO     | [job] queue monitor thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,177 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,178 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,221 | INFO     | [payload] failed_post thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,297 | INFO     | [data] control thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,322 | INFO     | [data] copytool_in thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,444 | INFO     | [job] job monitor thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,601 | INFO     | [payload] control thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:34,674 | INFO     | all job control threads have been joined
[2026-01-23 01:03:22] 2026-01-23 00:02:34,749 | INFO     | [payload] validate_post thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:35,107 | INFO     | [data] copytool_out thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:35,317 | INFO     | [job] validate thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:35,496 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:35,680 | INFO     | [job] control thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:37,107 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:02:43,525 | INFO     | job.realtimelogging is not enabled
[2026-01-23 01:03:22] 2026-01-23 00:02:44,531 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 01:03:22] 2026-01-23 00:03:04,017 | INFO     | PID=469905 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 01:03:22] 2026-01-23 00:03:04,018 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 01:03:22] 2026-01-23 00:03:04,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 01:03:22] 2026-01-23 00:03:04,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 01:03:22] 2026-01-23 00:03:17,077 | INFO     | [monitor] cgroup control has ended
[2026-01-23 01:03:22] 2026-01-23 00:03:17,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648079927104)>', '<ExcThread(monitor, started 140647285647104)>']
[2026-01-23 01:03:22] 2026-01-23 00:03:18,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 01:03:22] 2026-01-23 00:03:18,093 | INFO     | [monitor] control thread has ended
[2026-01-23 01:03:22] 2026-01-23 00:03:22,747 | INFO     | all workflow threads have been joined
[2026-01-23 01:03:22] 2026-01-23 00:03:22,748 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 01:03:22] 2026-01-23 00:03:22,748 | INFO     | traces error code: 0
[2026-01-23 01:03:22] 2026-01-23 00:03:22,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 01:03:22] 2026-01-23 00:03:22,832 [wrapper] ==== pilot stdout END ====
[2026-01-23 01:03:22] 2026-01-23 00:03:22,835 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 01:03:22] 2026-01-23 00:03:22,838 [wrapper] pilotpid: 469905
[2026-01-23 01:03:22] 2026-01-23 00:03:22,841 [wrapper] Pilot exit status: 0
[2026-01-23 01:03:22] 2026-01-23 00:03:22,849 [wrapper] pandaids: 6977488623
[2026-01-23 01:03:22] 2026-01-23 00:03:22,868 [wrapper] cleanup supervisor_pilot  480038 469906
[2026-01-23 01:03:22] 2026-01-23 00:03:22,871 [wrapper] Test setup, not cleaning
[2026-01-23 01:03:22] 2026-01-23 00:03:22,873 [wrapper] apfmon messages muted
[2026-01-23 01:03:22] 2026-01-23 00:03:22,876 [wrapper] ==== wrapper stdout END ====
[2026-01-23 01:03:22] 2026-01-23 00:03:22,878 [wrapper] ==== wrapper stderr END ====
[2026-01-23 01:03:22]  *** Error codes and diagnostics ***
[2026-01-23 01:03:22]     "exeErrorCode": 0,
[2026-01-23 01:03:22]     "exeErrorDiag": "",
[2026-01-23 01:03:22]     "pilotErrorCode": 0,
[2026-01-23 01:03:22]     "pilotErrorDiag": "",
[2026-01-23 01:03:22]  *** Listing of results directory ***
[2026-01-23 01:03:22] total 414956
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc    584422 Jan 22 03:30 pilot3.tar.gz
[2026-01-23 01:03:22] -rwx------ 1 boinc boinc     36322 Jan 22 03:30 runpilot2-wrapper.sh
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc      5111 Jan 22 03:32 queuedata.json
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc       100 Jan 22 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 01:03:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 23:15 run_atlas
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc       105 Jan 22 23:15 job.xml
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc 248588142 Jan 22 23:15 EVNT.48298617._000002.pool.root.1
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc      6680 Jan 22 23:15 init_data.xml
[2026-01-23 01:03:22] drwxrwx--x 2 boinc boinc      4096 Jan 22 23:15 shared
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc    597769 Jan 22 23:15 input.tar.gz
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc     15845 Jan 22 23:15 start_atlas.sh
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc         0 Jan 22 23:15 boinc_lockfile
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc      2601 Jan 22 23:15 pandaJob.out
[2026-01-23 01:03:22] -rw------- 1 boinc boinc   1003905 Jan 22 23:16 agis_schedconf.cvmfs.json
[2026-01-23 01:03:22] -rw------- 1 boinc boinc   1516246 Jan 22 23:16 agis_ddmendpoints.agis.ALL.json
[2026-01-23 01:03:22] -rw------- 1 boinc boinc       429 Jan 22 23:16 workernode_map.json
[2026-01-23 01:03:22] drwx------ 5 boinc boinc      4096 Jan 22 23:16 pilot3
[2026-01-23 01:03:22] -rw------- 1 boinc boinc 169965228 Jan 23 01:02 HITS.48298619._000047.pool.root.1
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc       529 Jan 23 01:02 boinc_task_state.xml
[2026-01-23 01:03:22] -rw------- 1 boinc boinc      1015 Jan 23 01:02 memory_monitor_summary.json
[2026-01-23 01:03:22] -rw------- 1 boinc boinc    283503 Jan 23 01:02 log.48298619._000047.job.log.tgz.1
[2026-01-23 01:03:22] -rw------- 1 boinc boinc      6303 Jan 23 01:02 heartbeat.json
[2026-01-23 01:03:22] -rw------- 1 boinc boinc        95 Jan 23 01:03 pilot_heartbeat.json
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc        27 Jan 23 01:03 wrapper_checkpoint.txt
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc      8192 Jan 23 01:03 boinc_mmap_file
[2026-01-23 01:03:22] -rw------- 1 boinc boinc      5005 Jan 23 01:03 pilotlog.txt
[2026-01-23 01:03:22] -rw------- 1 boinc boinc    922835 Jan 23 01:03 log.48298619._000047.job.log.1
[2026-01-23 01:03:22] -rw------- 1 boinc boinc       357 Jan 23 01:03 output.list
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc       620 Jan 23 01:03 runtime_log
[2026-01-23 01:03:22] -rw------- 1 boinc boinc   1228800 Jan 23 01:03 result.tar.gz
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc      8911 Jan 23 01:03 runtime_log.err
[2026-01-23 01:03:22] -rw------- 1 boinc boinc       660 Jan 23 01:03 JOPNDmIez28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4izKDmQpk2Qn.diag
[2026-01-23 01:03:22] -rw-r--r-- 1 boinc boinc     20960 Jan 23 01:03 stderr.txt
[2026-01-23 01:03:22] HITS file was successfully produced:
[2026-01-23 01:03:22] -rw------- 1 boinc boinc 169965228 Jan 23 01:02 shared/HITS.pool.root.1
[2026-01-23 01:03:22]  *** Contents of shared directory: ***
[2026-01-23 01:03:22] total 410556
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc 248588142 Jan 22 23:15 ATLAS.root_0
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc    597769 Jan 22 23:15 input.tar.gz
[2026-01-23 01:03:22] -rw-r--r-- 2 boinc boinc     15845 Jan 22 23:15 start_atlas.sh
[2026-01-23 01:03:22] -rw------- 1 boinc boinc 169965228 Jan 23 01:02 HITS.pool.root.1
[2026-01-23 01:03:22] -rw------- 1 boinc boinc   1228800 Jan 23 01:03 result.tar.gz
01:03:24 (465848): run_atlas exited; CPU time 18498.416823
01:03:24 (465848): called boinc_finish(0)

</stderr_txt>
]]>

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