Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:07 (3205475): wrapper (7.7.26015): starting
00:25:07 (3205475): wrapper: running run_atlas (--nthreads 6)
[2026-01-23 00:25:07] Arguments: --nthreads 6
[2026-01-23 00:25:07] Threads: 6
[2026-01-23 00:25:07] Checking for CVMFS
[2026-01-23 00:25:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 00:25:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 00:25:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 00:25:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 00:25:15] 2.13.3.0 2587536 2223 63640 155402 3 188 39950416 52428800 922 130560 0 2051202 99.996 42638 72 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-23 00:25:15] CVMFS is ok
[2026-01-23 00:25:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 00:25:15] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-23 00:25:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-23 00:25:15] Further information can be found at the LHC@home message board.
[2026-01-23 00:25:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 00:25:15] Checking for apptainer binary...
[2026-01-23 00:25:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 00:25:15] Running /usr/bin/apptainer --version
[2026-01-23 00:25:15] apptainer version 1.4.5-2.el9
[2026-01-23 00:25:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 00:25:15] Atto003
[2026-01-23 00:25:15] apptainer works
[2026-01-23 00:25:15] Set ATHENA_PROC_NUMBER=6
[2026-01-23 00:25:15] Set ATHENA_CORE_NUMBER=6
[2026-01-23 00:25:15] Starting ATLAS job with PandaID=6969446780
[2026-01-23 00:25:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 01:27:47]  *** The last 200 lines of the pilot log: ***
[2026-01-23 01:27:47]  protocol_id=None
[2026-01-23 01:27:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 01:27:47]  replicas=None
[2026-01-23 01:27:47]  scope=mc23_13p6TeV
[2026-01-23 01:27:47]  status=None
[2026-01-23 01:27:47]  status_code=0
[2026-01-23 01:27:47]  storage_token=
[2026-01-23 01:27:47]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6969446780/log.48215263._020602.job.log.tgz.1
[2026-01-23 01:27:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/26/log.48215263._020602.job.log.tgz.1
[2026-01-23 01:27:47]  workdir=None
[2026-01-23 01:27:47] ]
[2026-01-23 01:27:47] 2026-01-22 16:26:58,018 | INFO     | transferring file log.48215263._020602.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6969446780/log.48215263._020602.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-23 01:27:47] 2026-01-22 16:26:58,019 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6969446780/log.48215263._020602.job.log.tgz.1 /var/lib/boinc/slots/1/log.48215263._020602.job
[2026-01-23 01:27:47] 2026-01-22 16:26:58,028 | INFO     | adding to output.list: log.48215263._020602.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/26/log.48215263._020602.job.log.tg
[2026-01-23 01:27:47] 2026-01-22 16:26:58,029 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 01:27:47] 2026-01-22 16:26:58,029 | INFO     | summary of transferred files:
[2026-01-23 01:27:47] 2026-01-22 16:26:58,029 | INFO     |  -- lfn=log.48215263._020602.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 01:27:47] 2026-01-22 16:26:58,029 | INFO     | stage-out finished correctly
[2026-01-23 01:27:47] 2026-01-22 16:26:59,258 | INFO     | time since job start (3683s) is within the limit (349056.0s)
[2026-01-23 01:27:47] 2026-01-22 16:26:59,819 | INFO     | monitor loop #281: job 0:6969446780 is in state 'finished'
[2026-01-23 01:27:47] 2026-01-22 16:26:59,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 01:27:47] 2026-01-22 16:27:00,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 01:27:47] 2026-01-22 16:27:01,262 | INFO     | time since job start (3685s) is within the limit (349056.0s)
[2026-01-23 01:27:47] 2026-01-22 16:27:02,322 | INFO     | monitor loop #282: job 0:6969446780 is in state 'finished'
[2026-01-23 01:27:47] 2026-01-22 16:27:02,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 01:27:47] 2026-01-22 16:27:03,102 | INFO     | job 6969446780 has state=finished
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | preparing for final server update for job 6969446780 in state='finished'
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | this job has now completed (state=finished)
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | log transfer has been attempted: DONE
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | job 6969446780 has finished - writing final server update
[2026-01-23 01:27:47] 2026-01-22 16:27:03,103 | INFO     | total number of processed events: 400 (read)
[2026-01-23 01:27:47] 2026-01-22 16:27:03,104 | INFO     | executing command: lscpu
[2026-01-23 01:27:47] 2026-01-22 16:27:03,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 01:27:47] 2026-01-22 16:27:03,267 | INFO     | time since job start (3687s) is within the limit (349056.0s)
[2026-01-23 01:27:47] 2026-01-22 16:27:04,825 | INFO     | monitor loop #283: job 0:6969446780 is in state 'finished'
[2026-01-23 01:27:47] 2026-01-22 16:27:04,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 01:27:47] 2026-01-22 16:27:05,272 | INFO     | time since job start (3689s) is within the limit (349056.0s)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,425 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-23 01:27:47] 2026-01-22 16:27:06,427 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3799.972625
[2026-01-23 01:27:47] 2026-01-22 16:27:06,429 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6969446780/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,430 | INFO     | extracted standard info from prmon json
[2026-01-23 01:27:47] 2026-01-22 16:27:06,430 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 01:27:47] 2026-01-22 16:27:06,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 01:27:47] 2026-01-22 16:27:06,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 01:27:47] 2026-01-22 16:27:06,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 01:27:47] 2026-01-22 16:27:06,431 | INFO     | fitting pss+swap vs Time
[2026-01-23 01:27:47] 2026-01-22 16:27:06,431 | INFO     | sum of square deviations: 46147842.0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,431 | INFO     | sum of deviations: 1239893136.9999998
[2026-01-23 01:27:47] 2026-01-22 16:27:06,431 | INFO     | mean x: 1769097449.0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,431 | INFO     | mean y: 2691705.9056603773
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | intersect: -47529147067.81873
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | chi2: 0.016180305093250073
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | current memory leak: 26.87 B/s (using 53 data points, chi2=0.02)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | could have reported an average CPU frequency of 3716 MHz (6 samples)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | ..............................
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . Timing measurements:
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . get job = 0 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . initial setup = 4 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . payload setup = 4 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . stage-in = 0 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . payload execution = 3658 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,432 | INFO     | . stage-out = 0 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,433 | INFO     | . log creation = 0 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,433 | INFO     | ..............................
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | 
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | job summary report
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | --------------------------------------------------
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | PanDA job id: 6969446780
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | task id: 48215263
[2026-01-23 01:27:47] 2026-01-22 16:27:06,791 | INFO     | errors: (none)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | pilot state: finished 
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | transexitcode: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | exeerrorcode: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | exeerrordiag: 
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | exitcode: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | exitmsg: OK
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | cpuconsumptiontime: 20128 s
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | nevents: 400
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | neventsw: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | pid: 3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | pgrp: 3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | corecount: 6
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | event service: False
[2026-01-23 01:27:47] 2026-01-22 16:27:06,792 | INFO     | sizes: {0: 2283779, 1: 2283978, 4: 2284240, 11: 2284268, 3665: 2310087, 3666: 2310086, 3667: 2319268, 3670: 2319324, 3676: 2319518}
[2026-01-23 01:27:47] 2026-01-22 16:27:06,793 | INFO     | --------------------------------------------------
[2026-01-23 01:27:47] 2026-01-22 16:27:06,793 | INFO     | 
[2026-01-23 01:27:47] 2026-01-22 16:27:06,793 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-23 01:27:47] 2026-01-22 16:27:06,802 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,802 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | job 6969446780 has completed (purged errors)
[2026-01-23 01:27:47] 2026-01-22 16:27:06,804 | INFO     | overall cleanup function is called
[2026-01-23 01:27:47] 2026-01-22 16:27:07,810 | INFO     | --- collectZombieJob: --- 10, [3216346]
[2026-01-23 01:27:47] 2026-01-22 16:27:07,810 | INFO     | zombie collector waiting for pid 3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:07,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 01:27:47] 2026-01-22 16:27:07,810 | INFO     | collected zombie processes
[2026-01-23 01:27:47] 2026-01-22 16:27:07,810 | INFO     | will attempt to kill all subprocesses of pid=3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:07,879 | INFO     | process IDs to be killed: [3216346] (in reverse order)
[2026-01-23 01:27:47] 2026-01-22 16:27:07,905 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 01:27:47] 2026-01-22 16:27:07,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 01:27:47] 2026-01-22 16:27:07,907 | INFO     | did not find any defunct processes belonging to 3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:07,909 | INFO     | did not find any defunct processes belonging to 3216346
[2026-01-23 01:27:47] 2026-01-22 16:27:07,909 | INFO     | ready for new job
[2026-01-23 01:27:47] 2026-01-22 16:27:07,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 01:27:47] 2026-01-22 16:27:07,910 | INFO     | ***************************************
[2026-01-23 01:27:47] 2026-01-22 16:27:07,910 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 01:27:47] 2026-01-22 16:27:07,910 | INFO     | ***************************************
[2026-01-23 01:27:47] 2026-01-22 16:27:07,910 | INFO     | 
[2026-01-23 01:27:47] 2026-01-22 16:27:07,911 | INFO     | architecture information:
[2026-01-23 01:27:47] 2026-01-22 16:27:07,911 | INFO     | executing command: cat /etc/os-release
[2026-01-23 01:27:47] 2026-01-22 16:27:07,919 | INFO     | cat /etc/os-release:
[2026-01-23 01:27:47] NAME="CentOS Linux"
[2026-01-23 01:27:47] VERSION="7 (Core)"
[2026-01-23 01:27:47] ID="centos"
[2026-01-23 01:27:47] ID_LIKE="rhel fedora"
[2026-01-23 01:27:47] VERSION_ID="7"
[2026-01-23 01:27:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 01:27:47] ANSI_COLOR="0;31"
[2026-01-23 01:27:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 01:27:47] HOME_URL="https://www.centos.org/"
[2026-01-23 01:27:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 01:27:47] 
[2026-01-23 01:27:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 01:27:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 01:27:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 01:27:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 01:27:47] 
[2026-01-23 01:27:47] 2026-01-22 16:27:07,919 | INFO     | ***************************************
[2026-01-23 01:27:47] 2026-01-22 16:27:08,422 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-23 01:27:47] 2026-01-22 16:27:08,430 | INFO     | sufficient remaining disk space (104915271680 B)
[2026-01-23 01:27:47] 2026-01-22 16:27:08,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 01:27:47] 2026-01-22 16:27:08,430 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 01:27:47] 2026-01-22 16:27:08,430 | INFO     | update_server=False
[2026-01-23 01:27:47] 2026-01-22 16:27:08,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 01:27:47] 2026-01-22 16:27:08,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:27:47] 2026-01-22 16:27:08,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:27:47] 2026-01-22 16:27:08,431 | INFO     | aborting loop
[2026-01-23 01:27:47] 2026-01-22 16:27:08,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 01:27:47] 2026-01-22 16:27:08,863 | INFO     | all data control threads have been joined
[2026-01-23 01:27:47] 2026-01-22 16:27:09,435 | INFO     | [job] queue monitor thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,435 | INFO     | [job] retrieve thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,436 | INFO     | [job] job monitor thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,441 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,512 | INFO     | all payload control threads have been joined
[2026-01-23 01:27:47] 2026-01-22 16:27:09,515 | INFO     | all job control threads have been joined
[2026-01-23 01:27:47] 2026-01-22 16:27:09,619 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,839 | INFO     | [payload] failed_post thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:09,868 | INFO     | [data] control thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,143 | INFO     | [data] copytool_in thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,427 | INFO     | [payload] validate_post thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,517 | INFO     | [payload] control thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,521 | INFO     | [job] control thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,537 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,612 | INFO     | [data] copytool_out thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,636 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:10,809 | INFO     | [job] validate thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:11,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 01:27:47] 2026-01-22 16:27:15,304 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 01:27:47] 2026-01-22 16:27:38,421 | INFO     | PID=3209613 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 01:27:47] 2026-01-22 16:27:38,421 | INFO     | .. there are 2 such processes running
[2026-01-23 01:27:47] 2026-01-22 16:27:38,421 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 01:27:47] 2026-01-22 16:27:38,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 01:27:47] 2026-01-22 16:27:38,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 01:27:47] 2026-01-22 16:27:41,428 | INFO     | [monitor] cgroup control has ended
[2026-01-23 01:27:47] 2026-01-22 16:27:42,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485187614528)>', '<ExcThread(monitor, started 140484806694656)>']
[2026-01-23 01:27:47] 2026-01-22 16:27:43,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 01:27:47] 2026-01-22 16:27:43,446 | INFO     | [monitor] control thread has ended
[2026-01-23 01:27:47] 2026-01-22 16:27:47,588 | INFO     | all workflow threads have been joined
[2026-01-23 01:27:47] 2026-01-22 16:27:47,588 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 01:27:47] 2026-01-22 16:27:47,589 | INFO     | traces error code: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:47,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 01:27:47] 2026-01-22 16:27:47,654 [wrapper] ==== pilot stdout END ====
[2026-01-23 01:27:47] 2026-01-22 16:27:47,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 01:27:47] 2026-01-22 16:27:47,657 [wrapper] pilotpid: 3209613
[2026-01-23 01:27:47] 2026-01-22 16:27:47,658 [wrapper] Pilot exit status: 0
[2026-01-23 01:27:47] 2026-01-22 16:27:47,663 [wrapper] pandaids: 6969446780
[2026-01-23 01:27:47] 2026-01-22 16:27:47,678 [wrapper] cleanup supervisor_pilot 3243918 3209614
[2026-01-23 01:27:47] 2026-01-22 16:27:47,680 [wrapper] Test setup, not cleaning
[2026-01-23 01:27:47] 2026-01-22 16:27:47,681 [wrapper] apfmon messages muted
[2026-01-23 01:27:47] 2026-01-22 16:27:47,682 [wrapper] ==== wrapper stdout END ====
[2026-01-23 01:27:47] 2026-01-22 16:27:47,684 [wrapper] ==== wrapper stderr END ====
[2026-01-23 01:27:47]  *** Error codes and diagnostics ***
[2026-01-23 01:27:47]     "exeErrorCode": 0,
[2026-01-23 01:27:47]     "exeErrorDiag": "",
[2026-01-23 01:27:47]     "pilotErrorCode": 0,
[2026-01-23 01:27:47]     "pilotErrorDiag": "",
[2026-01-23 01:27:47]  *** Listing of results directory ***
[2026-01-23 01:27:47] total 731024
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc    579449 Jan 14 20:27 pilot3.tar.gz
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc      5112 Jan 14 20:29 queuedata.json
[2026-01-23 01:27:47] -rwx------. 1 boinc boinc     36322 Jan 14 20:29 runpilot2-wrapper.sh
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc       100 Jan 23 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 01:27:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 00:25 run_atlas
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc       105 Jan 23 00:25 job.xml
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc     15847 Jan 23 00:25 start_atlas.sh
[2026-01-23 01:27:47] drwxrwx--x. 2 boinc boinc        68 Jan 23 00:25 shared
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc    592401 Jan 23 00:25 input.tar.gz
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc      9345 Jan 23 00:25 init_data.xml
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc 591940301 Jan 23 00:25 EVNT.32794306._000825.pool.root.1
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc         0 Jan 23 00:25 boinc_lockfile
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc      2508 Jan 23 00:25 pandaJob.out
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc   1002389 Jan 23 00:25 agis_schedconf.cvmfs.json
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc   1516246 Jan 23 00:25 agis_ddmendpoints.agis.ALL.json
[2026-01-23 01:27:47] drwx------. 5 boinc boinc      4096 Jan 23 00:25 pilot3
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc 150995158 Jan 23 01:26 HITS.48215263._020602.pool.root.1
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc       530 Jan 23 01:26 boinc_task_state.xml
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc      1017 Jan 23 01:26 memory_monitor_summary.json
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc    292490 Jan 23 01:26 log.48215263._020602.job.log.tgz.1
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc        95 Jan 23 01:26 pilot_heartbeat.json
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc      7764 Jan 23 01:27 heartbeat.json
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc      8192 Jan 23 01:27 boinc_mmap_file
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc        27 Jan 23 01:27 wrapper_checkpoint.txt
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc      4824 Jan 23 01:27 pilotlog.txt
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc    565044 Jan 23 01:27 log.48215263._020602.job.log.1
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc       357 Jan 23 01:27 output.list
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc       620 Jan 23 01:27 runtime_log
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc    880640 Jan 23 01:27 result.tar.gz
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc       637 Jan 23 01:27 upGMDm9EE08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVtkKDm6fDNDm.diag
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc      8765 Jan 23 01:27 runtime_log.err
[2026-01-23 01:27:47] -rw-r--r--. 1 boinc boinc     21932 Jan 23 01:27 stderr.txt
[2026-01-23 01:27:47] HITS file was successfully produced:
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc 150995158 Jan 23 01:26 shared/HITS.pool.root.1
[2026-01-23 01:27:47]  *** Contents of shared directory: ***
[2026-01-23 01:27:47] total 726984
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc     15847 Jan 23 00:25 start_atlas.sh
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc    592401 Jan 23 00:25 input.tar.gz
[2026-01-23 01:27:47] -rw-r--r--. 2 boinc boinc 591940301 Jan 23 00:25 ATLAS.root_0
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc 150995158 Jan 23 01:26 HITS.pool.root.1
[2026-01-23 01:27:47] -rw-------. 1 boinc boinc    880640 Jan 23 01:27 result.tar.gz
01:27:49 (3205475): run_atlas exited; CPU time 20159.286208
01:27:49 (3205475): called boinc_finish(0)

</stderr_txt>
]]>

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