Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
14:57:42 (272548): wrapper (7.7.26015): starting
14:57:42 (272548): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 14:57:42] Arguments: --nthreads 4
[2026-01-23 14:57:42] Threads: 4
[2026-01-23 14:57:42] Checking for CVMFS
[2026-01-23 14:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 14:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 14:57:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 14:57:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 14:57:42] 2.13.3.0 80730 5138 46412 155431 3 9 19313738 33554433 0 130560 0 2357580 99.989 137787 190 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-23 14:57:42] CVMFS is ok
[2026-01-23 14:57:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 14:57:42] Checking for apptainer binary...
[2026-01-23 14:57:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 14:57:42] Running /usr/bin/apptainer --version
[2026-01-23 14:57:42] apptainer version 1.4.5
[2026-01-23 14:57:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 14:57:42] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-23 14:57:42] apptainer works
[2026-01-23 14:57:42] Set ATHENA_PROC_NUMBER=4
[2026-01-23 14:57:42] Set ATHENA_CORE_NUMBER=4
[2026-01-23 14:57:42] Starting ATLAS job with PandaID=6978089751
[2026-01-23 14:57:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 16:42:05]  *** The last 200 lines of the pilot log: ***
[2026-01-23 16:42:05] 2026-01-23 14:41:29,129 | INFO     | job 6978089751 has state=finished
[2026-01-23 16:42:05] 2026-01-23 14:41:29,129 | INFO     | preparing for final server update for job 6978089751 in state='finished'
[2026-01-23 16:42:05] 2026-01-23 14:41:29,129 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6978089751/jobReport.json
[2026-01-23 16:42:05] 2026-01-23 14:41:29,130 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-23 16:42:05] 2026-01-23 14:41:29,131 | INFO     | this job has now completed (state=finished)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,131 | INFO     | log transfer has been attempted: DONE
[2026-01-23 16:42:05] 2026-01-23 14:41:29,131 | INFO     | job 6978089751 has finished - writing final server update
[2026-01-23 16:42:05] 2026-01-23 14:41:29,131 | INFO     | total number of processed events: 400 (read)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6978089751/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | INFO     | extracted standard info from prmon json
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 16:42:05] 2026-01-23 14:41:29,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 16:42:05] 2026-01-23 14:41:29,134 | INFO     | fitting pss+swap vs Time
[2026-01-23 16:42:05] 2026-01-23 14:41:29,134 | INFO     | sum of square deviations: 329035093.1470599
[2026-01-23 16:42:05] 2026-01-23 14:41:29,134 | INFO     | sum of deviations: -8849105310.764708
[2026-01-23 16:42:05] 2026-01-23 14:41:29,134 | INFO     | mean x: 1769176167.5588236
[2026-01-23 16:42:05] 2026-01-23 14:41:29,134 | INFO     | mean y: 2507485.294117647
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | intersect: 47582922298.45196
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | chi2: 1.9630820013590322
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | sum of square deviations: 282980245.6288661
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | sum of deviations: -7529798532.917533
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | mean x: 1769176015.0618556
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | mean y: 2511857.319587629
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | intersect: 47078373753.90263
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | chi2: 1.9637856063988728
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | current chi2=1.9637856063988728 (change=-0.035841856802388744 %)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | right removable region: 96
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | sum of square deviations: 282976585.6288661
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | sum of deviations: -25923428853.134014
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | mean x: 1769176320.0618556
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | mean y: 2562896.855670103
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | intersect: 162076454487.03864
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | chi2: 0.1912173252854305
[2026-01-23 16:42:05] 2026-01-23 14:41:29,135 | INFO     | current chi2=0.1912173252854305 (change=90.25933072826037 %)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | sum of square deviations: 241429790.60869613
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | sum of deviations: -22690033426.478264
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | mean x: 1769176472.5652175
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | mean y: 2550992.663043478
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | intersect: 166273139218.89407
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | chi2: 0.19009191590156002
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | current chi2=0.19009191590156002 (change=0.5885499037237258 %)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | left removable region: 20
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | sum of square deviations: 136094258.5263159
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | sum of deviations: -13767706030.684216
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | mean x: 1769176594.5789473
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | mean y: 2526000.697368421
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | intersect: 178977771057.1965
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | chi2: 0.17203015610791794
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | current memory leak: -101.16 B/s (using 76 data points, chi2=0.17)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | could have reported an average CPU frequency of 3856 MHz (7 samples)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | ..............................
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | . Timing measurements:
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | . get job = 0 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | . initial setup = 3 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | . payload setup = 2 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,136 | INFO     | . stage-in = 0 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,137 | INFO     | . payload execution = 6195 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,137 | INFO     | . stage-out = 0 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,137 | INFO     | . log creation = 0 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,137 | INFO     | ..............................
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | 
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | job summary report
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | --------------------------------------------------
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | PanDA job id: 6978089751
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | task id: 48313436
[2026-01-23 16:42:05] 2026-01-23 14:41:29,164 | INFO     | errors: (none)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | pilot state: finished 
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | transexitcode: 0
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | exeerrorcode: 0
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | exeerrordiag: 
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | exitcode: 0
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | exitmsg: OK
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | cpuconsumptiontime: 23504 s
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | nevents: 400
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | neventsw: 0
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | pid: 281180
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | pgrp: 281180
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | corecount: 4
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | event service: False
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | sizes: {0: 2284369, 11: 2284369, 6202: 2311514, 6203: 2320512, 6205: 2320568, 6207: 2320762}
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | --------------------------------------------------
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | 
[2026-01-23 16:42:05] 2026-01-23 14:41:29,165 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 16:42:05] 2026-01-23 14:41:29,175 | INFO     | job 6978089751 has completed (purged errors)
[2026-01-23 16:42:05] 2026-01-23 14:41:29,175 | INFO     | overall cleanup function is called
[2026-01-23 16:42:05] 2026-01-23 14:41:30,181 | INFO     | --- collectZombieJob: --- 10, [281180]
[2026-01-23 16:42:05] 2026-01-23 14:41:30,181 | INFO     | zombie collector waiting for pid 281180
[2026-01-23 16:42:05] 2026-01-23 14:41:30,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 16:42:05] 2026-01-23 14:41:30,181 | INFO     | collected zombie processes
[2026-01-23 16:42:05] 2026-01-23 14:41:30,181 | INFO     | will attempt to kill all subprocesses of pid=281180
[2026-01-23 16:42:05] 2026-01-23 14:41:30,275 | INFO     | process IDs to be killed: [281180] (in reverse order)
[2026-01-23 16:42:05] 2026-01-23 14:41:30,307 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 16:42:05] 2026-01-23 14:41:30,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 16:42:05] 2026-01-23 14:41:30,309 | INFO     | did not find any defunct processes belonging to 281180
[2026-01-23 16:42:05] 2026-01-23 14:41:30,311 | INFO     | did not find any defunct processes belonging to 281180
[2026-01-23 16:42:05] 2026-01-23 14:41:30,311 | INFO     | ready for new job
[2026-01-23 16:42:05] 2026-01-23 14:41:30,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 16:42:05] 2026-01-23 14:41:30,312 | INFO     | **************************************
[2026-01-23 16:42:05] 2026-01-23 14:41:30,312 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 16:42:05] 2026-01-23 14:41:30,312 | INFO     | **************************************
[2026-01-23 16:42:05] 2026-01-23 14:41:30,312 | INFO     | 
[2026-01-23 16:42:05] 2026-01-23 14:41:30,313 | INFO     | architecture information:
[2026-01-23 16:42:05] 2026-01-23 14:41:30,313 | INFO     | executing command: cat /etc/os-release
[2026-01-23 16:42:05] 2026-01-23 14:41:30,319 | INFO     | cat /etc/os-release:
[2026-01-23 16:42:05] NAME="CentOS Linux"
[2026-01-23 16:42:05] VERSION="7 (Core)"
[2026-01-23 16:42:05] ID="centos"
[2026-01-23 16:42:05] ID_LIKE="rhel fedora"
[2026-01-23 16:42:05] VERSION_ID="7"
[2026-01-23 16:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 16:42:05] ANSI_COLOR="0;31"
[2026-01-23 16:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 16:42:05] HOME_URL="https://www.centos.org/"
[2026-01-23 16:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 16:42:05] 
[2026-01-23 16:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 16:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 16:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 16:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 16:42:05] 
[2026-01-23 16:42:05] 2026-01-23 14:41:30,319 | INFO     | **************************************
[2026-01-23 16:42:05] 2026-01-23 14:41:30,822 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-23 16:42:05] 2026-01-23 14:41:30,827 | INFO     | sufficient remaining disk space (68136468480 B)
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | INFO     | update_server=False
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 16:42:05] 2026-01-23 14:41:30,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 16:42:05] 2026-01-23 14:41:30,982 | INFO     | all data control threads have been joined
[2026-01-23 16:42:05] 2026-01-23 14:41:31,029 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 16:42:05] 2026-01-23 14:41:31,029 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 16:42:05] 2026-01-23 14:41:31,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 16:42:05] 2026-01-23 14:41:31,029 | INFO     | will abort loop
[2026-01-23 16:42:05] 2026-01-23 14:41:31,541 | INFO     | all job control threads have been joined
[2026-01-23 16:42:05] 2026-01-23 14:41:31,625 | INFO     | all payload control threads have been joined
[2026-01-23 16:42:05] 2026-01-23 14:41:31,833 | INFO     | [job] retrieve thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:31,833 | INFO     | [job] queue monitor thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:31,987 | INFO     | [data] control thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,035 | INFO     | [job] job monitor thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,510 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,546 | INFO     | [job] control thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,561 | INFO     | [job] validate thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,624 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,625 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,631 | INFO     | [payload] control thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,796 | INFO     | [data] copytool_in thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,833 | INFO     | [data] copytool_out thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,873 | INFO     | [payload] failed_post thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:32,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 16:42:05] 2026-01-23 14:41:33,327 | INFO     | [payload] validate_post thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:36,938 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:41:40,925 | INFO     | job.realtimelogging is not enabled
[2026-01-23 16:42:05] 2026-01-23 14:41:41,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 16:42:05] 2026-01-23 14:42:00,128 | INFO     | [monitor] cgroup control has ended
[2026-01-23 16:42:05] 2026-01-23 14:42:00,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245457319744)>', '<ExcThread(monitor, started 140244968007424)>']
[2026-01-23 16:42:05] 2026-01-23 14:42:01,310 | INFO     | PID=276574 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 16:42:05] 2026-01-23 14:42:01,311 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 16:42:05] 2026-01-23 14:42:01,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 16:42:05] 2026-01-23 14:42:01,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 16:42:05] 2026-01-23 14:42:01,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 16:42:05] 2026-01-23 14:42:01,311 | INFO     | [monitor] control thread has ended
[2026-01-23 16:42:05] 2026-01-23 14:42:05,718 | INFO     | all workflow threads have been joined
[2026-01-23 16:42:05] 2026-01-23 14:42:05,718 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 16:42:05] 2026-01-23 14:42:05,718 | INFO     | traces error code: 0
[2026-01-23 16:42:05] 2026-01-23 14:42:05,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 16:42:05] 2026-01-23 14:42:05,768 [wrapper] ==== pilot stdout END ====
[2026-01-23 16:42:05] 2026-01-23 14:42:05,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 16:42:05] 2026-01-23 14:42:05,771 [wrapper] pilotpid: 276574
[2026-01-23 16:42:05] 2026-01-23 14:42:05,772 [wrapper] Pilot exit status: 0
[2026-01-23 16:42:05] 2026-01-23 14:42:05,778 [wrapper] pandaids: 6978089751
[2026-01-23 16:42:05] 2026-01-23 14:42:05,800 [wrapper] cleanup supervisor_pilot  346697 276575
[2026-01-23 16:42:05] 2026-01-23 14:42:05,802 [wrapper] Test setup, not cleaning
[2026-01-23 16:42:05] 2026-01-23 14:42:05,804 [wrapper] apfmon messages muted
[2026-01-23 16:42:05] 2026-01-23 14:42:05,805 [wrapper] ==== wrapper stdout END ====
[2026-01-23 16:42:05] 2026-01-23 14:42:05,806 [wrapper] ==== wrapper stderr END ====
[2026-01-23 16:42:05]  *** Error codes and diagnostics ***
[2026-01-23 16:42:05]     "exeErrorCode": 0,
[2026-01-23 16:42:05]     "exeErrorDiag": "",
[2026-01-23 16:42:05]     "pilotErrorCode": 0,
[2026-01-23 16:42:05]     "pilotErrorDiag": "",
[2026-01-23 16:42:05]  *** Listing of results directory ***
[2026-01-23 16:42:05] total 603944
[2026-01-23 16:42:05] -rwx------ 1 ek ek     36322 Jan 21 18:32 runpilot2-wrapper.sh
[2026-01-23 16:42:05] -rw-r--r-- 1 ek ek      5111 Jan 21 18:33 queuedata.json
[2026-01-23 16:42:05] -rw-r--r-- 1 ek ek    584422 Jan 21 18:33 pilot3.tar.gz
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek       100 Jan 23 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 16:42:05] -rwxr-xr-x 1 ek ek      7986 Jan 23 14:57 run_atlas
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek       105 Jan 23 14:57 job.xml
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek 295230134 Jan 23 14:57 EVNT.48313433._000007.pool.root.1
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek    597771 Jan 23 14:57 input.tar.gz
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek     15845 Jan 23 14:57 start_atlas.sh
[2026-01-23 16:42:05] drwxrwx--x 2 ek ek      4096 Jan 23 14:57 shared
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek         0 Jan 23 14:57 boinc_setup_complete
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek      9841 Jan 23 14:57 init_data.xml
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek         0 Jan 23 14:57 boinc_lockfile
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek      2615 Jan 23 14:57 pandaJob.out
[2026-01-23 16:42:05] -rw------- 1 ek ek        50 Jan 23 14:57 setup.sh.local
[2026-01-23 16:42:05] -rw------- 1 ek ek   1004198 Jan 23 14:57 agis_schedconf.cvmfs.json
[2026-01-23 16:42:05] -rw------- 1 ek ek   1516246 Jan 23 14:57 agis_ddmendpoints.agis.ALL.json
[2026-01-23 16:42:05] -rw------- 1 ek ek       432 Jan 23 14:57 workernode_map.json
[2026-01-23 16:42:05] drwx------ 5 ek ek      4096 Jan 23 14:57 pilot3
[2026-01-23 16:42:05] -rw------- 1 ek ek 316896316 Jan 23 16:41 HITS.48313436._000158.pool.root.1
[2026-01-23 16:42:05] -rw------- 1 ek ek      1037 Jan 23 16:41 memory_monitor_summary.json
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek       529 Jan 23 16:41 boinc_task_state.xml
[2026-01-23 16:42:05] -rw------- 1 ek ek    284767 Jan 23 16:41 log.48313436._000158.job.log.tgz.1
[2026-01-23 16:42:05] -rw------- 1 ek ek      6337 Jan 23 16:41 heartbeat.json
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek      8192 Jan 23 16:41 boinc_mmap_file
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek        27 Jan 23 16:41 wrapper_checkpoint.txt
[2026-01-23 16:42:05] -rw------- 1 ek ek        95 Jan 23 16:42 pilot_heartbeat.json
[2026-01-23 16:42:05] -rw------- 1 ek ek      5001 Jan 23 16:42 pilotlog.txt
[2026-01-23 16:42:05] -rw------- 1 ek ek    894830 Jan 23 16:42 log.48313436._000158.job.log.1
[2026-01-23 16:42:05] -rw------- 1 ek ek       357 Jan 23 16:42 output.list
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek       620 Jan 23 16:42 runtime_log
[2026-01-23 16:42:05] -rw------- 1 ek ek   1198080 Jan 23 16:42 result.tar.gz
[2026-01-23 16:42:05] -rw------- 1 ek ek       667 Jan 23 16:42 WKENDm7Iq28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmatyKDmTuX8Qn.diag
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek      9501 Jan 23 16:42 runtime_log.err
[2026-01-23 16:42:05] -rw-rw-r-- 1 ek ek     21118 Jan 23 16:42 stderr.txt
[2026-01-23 16:42:05] HITS file was successfully produced:
[2026-01-23 16:42:05] -rw------- 1 ek ek 316896316 Jan 23 16:41 shared/HITS.pool.root.1
[2026-01-23 16:42:05]  *** Contents of shared directory: ***
[2026-01-23 16:42:05] total 599564
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek 295230134 Jan 23 14:57 ATLAS.root_0
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek    597771 Jan 23 14:57 input.tar.gz
[2026-01-23 16:42:05] -rw-r--r-- 2 ek ek     15845 Jan 23 14:57 start_atlas.sh
[2026-01-23 16:42:05] -rw------- 1 ek ek 316896316 Jan 23 16:41 HITS.pool.root.1
[2026-01-23 16:42:05] -rw------- 1 ek ek   1198080 Jan 23 16:42 result.tar.gz
16:42:07 (272548): run_atlas exited; CPU time 23566.656739
16:42:07 (272548): called boinc_finish(0)

</stderr_txt>
]]>

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