Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
10:38:12 (63445): wrapper (7.7.26015): starting
10:38:12 (63445): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 10:38:12] Arguments: --nthreads 4
[2026-01-23 10:38:12] Threads: 4
[2026-01-23 10:38:12] Checking for CVMFS
[2026-01-23 10:38:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 10:38:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 10:38:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 10:38:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 10:38:12] 2.13.3.0 80730 4878 46056 155428 2 50 19224073 33554432 0 130560 0 2238043 99.989 136412 192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-23 10:38:12] CVMFS is ok
[2026-01-23 10:38:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 10:38:12] Checking for apptainer binary...
[2026-01-23 10:38:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 10:38:12] Running /usr/bin/apptainer --version
[2026-01-23 10:38:12] apptainer version 1.4.5
[2026-01-23 10:38:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 10:38:12] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-23 10:38:12] apptainer works
[2026-01-23 10:38:12] Set ATHENA_PROC_NUMBER=4
[2026-01-23 10:38:12] Set ATHENA_CORE_NUMBER=4
[2026-01-23 10:38:12] Starting ATLAS job with PandaID=6978788236
[2026-01-23 10:38:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 12:16:35]  *** The last 200 lines of the pilot log: ***
[2026-01-23 12:16:35]  direct_access_wan=False
[2026-01-23 12:16:35]  domain=
[2026-01-23 12:16:35]  filesize=331347
[2026-01-23 12:16:35]  filetype=log
[2026-01-23 12:16:35]  guid=5013b013-ddf0-463e-aae1-56b9ee15e30f
[2026-01-23 12:16:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 12:16:35]  is_altstaged=None
[2026-01-23 12:16:35]  is_tar=False
[2026-01-23 12:16:35]  lfn=log.48313408._000273.job.log.tgz.1
[2026-01-23 12:16:35]  mtime=0
[2026-01-23 12:16:35]  protocol_id=None
[2026-01-23 12:16:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 12:16:35]  replicas=None
[2026-01-23 12:16:35]  scope=mc23_13p6TeV
[2026-01-23 12:16:35]  status=None
[2026-01-23 12:16:35]  status_code=0
[2026-01-23 12:16:35]  storage_token=
[2026-01-23 12:16:35]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6978788236/log.48313408._000273.job.log.tgz.1
[2026-01-23 12:16:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/15/log.48313408._000273.job.log.tgz.1
[2026-01-23 12:16:35]  workdir=None
[2026-01-23 12:16:35] ]
[2026-01-23 12:16:35] 2026-01-23 10:15:54,862 | INFO     | transferring file log.48313408._000273.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6978788236/log.48313408._000273.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-23 12:16:35] 2026-01-23 10:15:54,862 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6978788236/log.48313408._000273.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48313408._000273.job
[2026-01-23 12:16:35] 2026-01-23 10:15:54,871 | INFO     | adding to output.list: log.48313408._000273.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/15/log.48313408._000273.job.log.tg
[2026-01-23 12:16:35] 2026-01-23 10:15:54,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 12:16:35] 2026-01-23 10:15:54,871 | INFO     | summary of transferred files:
[2026-01-23 12:16:35] 2026-01-23 10:15:54,871 | INFO     |  -- lfn=log.48313408._000273.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 12:16:35] 2026-01-23 10:15:54,871 | INFO     | stage-out finished correctly
[2026-01-23 12:16:35] 2026-01-23 10:15:55,539 | INFO     | monitor loop #446: job 0:6978788236 is in state 'finished'
[2026-01-23 12:16:35] 2026-01-23 10:15:55,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 12:16:35] 2026-01-23 10:15:55,612 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 12:16:35] 2026-01-23 10:15:56,332 | INFO     | time since job start (5856s) is within the limit (349056.0s)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,588 | INFO     | job 6978788236 has state=finished
[2026-01-23 12:16:35] 2026-01-23 10:15:57,588 | INFO     | preparing for final server update for job 6978788236 in state='finished'
[2026-01-23 12:16:35] 2026-01-23 10:15:57,588 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6978788236/jobReport.json
[2026-01-23 12:16:35] 2026-01-23 10:15:57,589 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-23 12:16:35] 2026-01-23 10:15:57,589 | INFO     | this job has now completed (state=finished)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,590 | INFO     | log transfer has been attempted: DONE
[2026-01-23 12:16:35] 2026-01-23 10:15:57,590 | INFO     | job 6978788236 has finished - writing final server update
[2026-01-23 12:16:35] 2026-01-23 10:15:57,590 | INFO     | total number of processed events: 400 (read)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,591 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6978788236/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | INFO     | extracted standard info from prmon json
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 12:16:35] 2026-01-23 10:15:57,592 | INFO     | fitting pss+swap vs Time
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | sum of square deviations: 218571540.0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | sum of deviations: 2399379550.9999995
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | mean x: 1769160505.0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | mean y: 2850615.8988764044
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | intersect: -19418193579.21377
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | chi2: 0.0008766122269914908
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | current memory leak: 10.98 B/s (using 89 data points, chi2=0.00)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | could have reported an average CPU frequency of 4211 MHz (7 samples)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | ..............................
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . Timing measurements:
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . get job = 0 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . initial setup = 3 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . payload setup = 2 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . stage-in = 0 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . payload execution = 5837 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . stage-out = 0 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | . log creation = 0 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,593 | INFO     | ..............................
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | 
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | job summary report
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | --------------------------------------------------
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | PanDA job id: 6978788236
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | task id: 48313408
[2026-01-23 12:16:35] 2026-01-23 10:15:57,620 | INFO     | errors: (none)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | pilot state: finished 
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | transexitcode: 0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | exeerrorcode: 0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | exeerrordiag: 
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | exitcode: 0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | exitmsg: OK
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | cpuconsumptiontime: 22249 s
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | nevents: 400
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | neventsw: 0
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | pid: 71906
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | pgrp: 71906
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | corecount: 4
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | event service: False
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | sizes: {0: 2284389, 11: 2284389, 5843: 2311292, 5844: 2320290, 5845: 2320346, 5847: 2320540}
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | --------------------------------------------------
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | 
[2026-01-23 12:16:35] 2026-01-23 10:15:57,621 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,631 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 12:16:35] 2026-01-23 10:15:57,632 | INFO     | job 6978788236 has completed (purged errors)
[2026-01-23 12:16:35] 2026-01-23 10:15:57,632 | INFO     | overall cleanup function is called
[2026-01-23 12:16:35] 2026-01-23 10:15:58,635 | INFO     | --- collectZombieJob: --- 10, [71906]
[2026-01-23 12:16:35] 2026-01-23 10:15:58,636 | INFO     | zombie collector waiting for pid 71906
[2026-01-23 12:16:35] 2026-01-23 10:15:58,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 12:16:35] 2026-01-23 10:15:58,636 | INFO     | collected zombie processes
[2026-01-23 12:16:35] 2026-01-23 10:15:58,636 | INFO     | will attempt to kill all subprocesses of pid=71906
[2026-01-23 12:16:35] 2026-01-23 10:15:58,731 | INFO     | process IDs to be killed: [71906] (in reverse order)
[2026-01-23 12:16:35] 2026-01-23 10:15:58,761 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 12:16:35] 2026-01-23 10:15:58,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 12:16:35] 2026-01-23 10:15:58,765 | INFO     | did not find any defunct processes belonging to 71906
[2026-01-23 12:16:35] 2026-01-23 10:15:58,767 | INFO     | did not find any defunct processes belonging to 71906
[2026-01-23 12:16:35] 2026-01-23 10:15:58,767 | INFO     | ready for new job
[2026-01-23 12:16:35] 2026-01-23 10:15:58,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 12:16:35] 2026-01-23 10:15:58,768 | INFO     | **************************************
[2026-01-23 12:16:35] 2026-01-23 10:15:58,768 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 12:16:35] 2026-01-23 10:15:58,768 | INFO     | **************************************
[2026-01-23 12:16:35] 2026-01-23 10:15:58,768 | INFO     | 
[2026-01-23 12:16:35] 2026-01-23 10:15:58,769 | INFO     | architecture information:
[2026-01-23 12:16:35] 2026-01-23 10:15:58,769 | INFO     | executing command: cat /etc/os-release
[2026-01-23 12:16:35] 2026-01-23 10:15:58,775 | INFO     | cat /etc/os-release:
[2026-01-23 12:16:35] NAME="CentOS Linux"
[2026-01-23 12:16:35] VERSION="7 (Core)"
[2026-01-23 12:16:35] ID="centos"
[2026-01-23 12:16:35] ID_LIKE="rhel fedora"
[2026-01-23 12:16:35] VERSION_ID="7"
[2026-01-23 12:16:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 12:16:35] ANSI_COLOR="0;31"
[2026-01-23 12:16:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 12:16:35] HOME_URL="https://www.centos.org/"
[2026-01-23 12:16:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 12:16:35] 
[2026-01-23 12:16:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 12:16:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 12:16:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 12:16:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 12:16:35] 
[2026-01-23 12:16:35] 2026-01-23 10:15:58,775 | INFO     | **************************************
[2026-01-23 12:16:35] 2026-01-23 10:15:59,278 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | INFO     | sufficient remaining disk space (67308093440 B)
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | INFO     | update_server=False
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | INFO     | aborting loop
[2026-01-23 12:16:35] 2026-01-23 10:15:59,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 12:16:35] 2026-01-23 10:15:59,699 | INFO     | all data control threads have been joined
[2026-01-23 12:16:35] 2026-01-23 10:16:00,197 | INFO     | all job control threads have been joined
[2026-01-23 12:16:35] 2026-01-23 10:16:00,291 | INFO     | [job] retrieve thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,291 | INFO     | [job] job monitor thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,291 | INFO     | [job] queue monitor thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 12:16:35] 2026-01-23 10:16:00,547 | INFO     | all payload control threads have been joined
[2026-01-23 12:16:35] 2026-01-23 10:16:00,704 | INFO     | [data] control thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,808 | INFO     | [job] validate thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,894 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,952 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,972 | INFO     | [payload] failed_post thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:00,972 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:01,140 | INFO     | [data] copytool_in thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:01,202 | INFO     | [job] control thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:01,490 | INFO     | [payload] validate_post thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:01,552 | INFO     | [payload] control thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:01,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 12:16:35] 2026-01-23 10:16:01,770 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:02,412 | INFO     | [data] copytool_out thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:05,650 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 12:16:35] 2026-01-23 10:16:28,556 | INFO     | [monitor] cgroup control has ended
[2026-01-23 12:16:35] 2026-01-23 10:16:29,501 | INFO     | PID=67280 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 12:16:35] 2026-01-23 10:16:29,501 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 12:16:35] 2026-01-23 10:16:29,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 12:16:35] 2026-01-23 10:16:29,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 12:16:35] 2026-01-23 10:16:30,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646286141248)>', '<ExcThread(monitor, started 140645775681280)>']
[2026-01-23 12:16:35] 2026-01-23 10:16:30,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 12:16:35] 2026-01-23 10:16:30,506 | INFO     | [monitor] control thread has ended
[2026-01-23 12:16:35] 2026-01-23 10:16:35,140 | INFO     | all workflow threads have been joined
[2026-01-23 12:16:35] 2026-01-23 10:16:35,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 12:16:35] 2026-01-23 10:16:35,140 | INFO     | traces error code: 0
[2026-01-23 12:16:35] 2026-01-23 10:16:35,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 12:16:35] 2026-01-23 10:16:35,180 [wrapper] ==== pilot stdout END ====
[2026-01-23 12:16:35] 2026-01-23 10:16:35,181 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 12:16:35] 2026-01-23 10:16:35,182 [wrapper] pilotpid: 67280
[2026-01-23 12:16:35] 2026-01-23 10:16:35,184 [wrapper] Pilot exit status: 0
[2026-01-23 12:16:35] 2026-01-23 10:16:35,189 [wrapper] pandaids: 6978788236
[2026-01-23 12:16:35] 2026-01-23 10:16:35,209 [wrapper] cleanup supervisor_pilot  136243 67281
[2026-01-23 12:16:35] 2026-01-23 10:16:35,211 [wrapper] Test setup, not cleaning
[2026-01-23 12:16:35] 2026-01-23 10:16:35,212 [wrapper] apfmon messages muted
[2026-01-23 12:16:35] 2026-01-23 10:16:35,214 [wrapper] ==== wrapper stdout END ====
[2026-01-23 12:16:35] 2026-01-23 10:16:35,215 [wrapper] ==== wrapper stderr END ====
[2026-01-23 12:16:35]  *** Error codes and diagnostics ***
[2026-01-23 12:16:35]     "exeErrorCode": 0,
[2026-01-23 12:16:35]     "exeErrorDiag": "",
[2026-01-23 12:16:35]     "pilotErrorCode": 0,
[2026-01-23 12:16:35]     "pilotErrorDiag": "",
[2026-01-23 12:16:35]  *** Listing of results directory ***
[2026-01-23 12:16:35] total 624040
[2026-01-23 12:16:35] -rw-r--r-- 1 ek ek    584422 Jan 21 23:48 pilot3.tar.gz
[2026-01-23 12:16:35] -rwx------ 1 ek ek     36322 Jan 21 23:52 runpilot2-wrapper.sh
[2026-01-23 12:16:35] -rw-r--r-- 1 ek ek      5111 Jan 21 23:53 queuedata.json
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek       100 Jan 23 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 12:16:35] -rwxr-xr-x 1 ek ek      7986 Jan 23 10:38 run_atlas
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek       105 Jan 23 10:38 job.xml
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek 321080859 Jan 23 10:38 EVNT.48313406._000015.pool.root.1
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek    597777 Jan 23 10:38 input.tar.gz
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek     15845 Jan 23 10:38 start_atlas.sh
[2026-01-23 12:16:35] drwxrwx--x 2 ek ek      4096 Jan 23 10:38 shared
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek         0 Jan 23 10:38 boinc_setup_complete
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek      9841 Jan 23 10:38 init_data.xml
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek         0 Jan 23 10:38 boinc_lockfile
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek      2630 Jan 23 10:38 pandaJob.out
[2026-01-23 12:16:35] -rw------- 1 ek ek        50 Jan 23 10:38 setup.sh.local
[2026-01-23 12:16:35] -rw------- 1 ek ek   1003905 Jan 23 10:38 agis_schedconf.cvmfs.json
[2026-01-23 12:16:35] -rw------- 1 ek ek   1516246 Jan 23 10:38 agis_ddmendpoints.agis.ALL.json
[2026-01-23 12:16:35] -rw------- 1 ek ek       432 Jan 23 10:38 workernode_map.json
[2026-01-23 12:16:35] drwx------ 5 ek ek      4096 Jan 23 10:38 pilot3
[2026-01-23 12:16:35] -rw------- 1 ek ek 311644332 Jan 23 12:15 HITS.48313408._000273.pool.root.1
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek       529 Jan 23 12:15 boinc_task_state.xml
[2026-01-23 12:16:35] -rw------- 1 ek ek      1033 Jan 23 12:15 memory_monitor_summary.json
[2026-01-23 12:16:35] -rw------- 1 ek ek    331347 Jan 23 12:15 log.48313408._000273.job.log.tgz.1
[2026-01-23 12:16:35] -rw------- 1 ek ek      6331 Jan 23 12:15 heartbeat.json
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek        27 Jan 23 12:16 wrapper_checkpoint.txt
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek      8192 Jan 23 12:16 boinc_mmap_file
[2026-01-23 12:16:35] -rw------- 1 ek ek        95 Jan 23 12:16 pilot_heartbeat.json
[2026-01-23 12:16:35] -rw------- 1 ek ek      4742 Jan 23 12:16 pilotlog.txt
[2026-01-23 12:16:35] -rw------- 1 ek ek    843744 Jan 23 12:16 log.48313408._000273.job.log.1
[2026-01-23 12:16:35] -rw------- 1 ek ek       357 Jan 23 12:16 output.list
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek       620 Jan 23 12:16 runtime_log
[2026-01-23 12:16:35] -rw------- 1 ek ek   1187840 Jan 23 12:16 result.tar.gz
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek      9501 Jan 23 12:16 runtime_log.err
[2026-01-23 12:16:35] -rw------- 1 ek ek       663 Jan 23 12:16 MhRNDmWIv28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHNzKDmJFJJ7n.diag
[2026-01-23 12:16:35] -rw-rw-r-- 1 ek ek     20882 Jan 23 12:16 stderr.txt
[2026-01-23 12:16:35] HITS file was successfully produced:
[2026-01-23 12:16:35] -rw------- 1 ek ek 311644332 Jan 23 12:15 shared/HITS.pool.root.1
[2026-01-23 12:16:35]  *** Contents of shared directory: ***
[2026-01-23 12:16:35] total 619668
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek 321080859 Jan 23 10:38 ATLAS.root_0
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek    597777 Jan 23 10:38 input.tar.gz
[2026-01-23 12:16:35] -rw-r--r-- 2 ek ek     15845 Jan 23 10:38 start_atlas.sh
[2026-01-23 12:16:35] -rw------- 1 ek ek 311644332 Jan 23 12:15 HITS.pool.root.1
[2026-01-23 12:16:35] -rw------- 1 ek ek   1187840 Jan 23 12:16 result.tar.gz
12:16:37 (63445): run_atlas exited; CPU time 22306.037217
12:16:37 (63445): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN