Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:43:31 (2550123): wrapper (7.7.26015): starting
23:43:31 (2550123): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 23:43:31] Arguments: --nthreads 3
[2026-01-22 23:43:31] Threads: 3
[2026-01-22 23:43:31] Checking for CVMFS
[2026-01-22 23:43:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 23:43:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 23:43:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 23:43:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 23:43:31] 2.9.2.0 1590521 2259 80772 155412 3 50 24685669 36864000 0 130560 0 923603 99.989 41489 8588 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 23:43:31] CVMFS is ok
[2026-01-22 23:43:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 23:43:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 23:43:31] Further information can be found at the LHC@home message board.
[2026-01-22 23:43:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 23:43:31] Checking for apptainer binary...
[2026-01-22 23:43:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 23:43:31] Running /usr/bin/apptainer --version
[2026-01-22 23:43:31] apptainer version 1.4.1-1.1
[2026-01-22 23:43:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 23:43:32] legendA163
[2026-01-22 23:43:32] apptainer works
[2026-01-22 23:43:32] Set ATHENA_PROC_NUMBER=3
[2026-01-22 23:43:32] Set ATHENA_CORE_NUMBER=3
[2026-01-22 23:43:32] Starting ATLAS job with PandaID=6978788465
[2026-01-22 23:43:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 01:02:11]  *** The last 200 lines of the pilot log: ***
[2026-01-23 01:02:11]  guid=a575cae8-7082-4670-8aa6-06fb5e26fce4
[2026-01-23 01:02:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 01:02:11]  is_altstaged=None
[2026-01-23 01:02:11]  is_tar=False
[2026-01-23 01:02:11]  lfn=log.48312938._000163.job.log.tgz.1
[2026-01-23 01:02:11]  mtime=0
[2026-01-23 01:02:11]  protocol_id=None
[2026-01-23 01:02:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 01:02:11]  replicas=None
[2026-01-23 01:02:11]  scope=mc23_13p6TeV
[2026-01-23 01:02:11]  status=None
[2026-01-23 01:02:11]  status_code=0
[2026-01-23 01:02:11]  storage_token=
[2026-01-23 01:02:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6978788465/log.48312938._000163.job.log.tgz.1
[2026-01-23 01:02:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/44/log.48312938._000163.job.log.tgz.1
[2026-01-23 01:02:11]  workdir=None
[2026-01-23 01:02:11] ]
[2026-01-23 01:02:11] 2026-01-23 00:01:36,155 | INFO     | time since job start (4674s) is within the limit (349056.0s)
[2026-01-23 01:02:11] 2026-01-23 00:01:36,161 | INFO     | transferring file log.48312938._000163.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6978788465/log.48312938._000163.job.log.tgz.1 to /local/data/boinc/
[2026-01-23 01:02:11] 2026-01-23 00:01:36,161 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6978788465/log.48312938._000163.job.log.tgz.1 /local/data/boinc/slots/0/log.48312938._0001
[2026-01-23 01:02:11] 2026-01-23 00:01:36,174 | INFO     | adding to output.list: log.48312938._000163.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/44/log.48312938._000163.job.log.tg
[2026-01-23 01:02:11] 2026-01-23 00:01:36,174 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 01:02:11] 2026-01-23 00:01:36,174 | INFO     | summary of transferred files:
[2026-01-23 01:02:11] 2026-01-23 00:01:36,174 | INFO     |  -- lfn=log.48312938._000163.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 01:02:11] 2026-01-23 00:01:36,174 | INFO     | stage-out finished correctly
[2026-01-23 01:02:11] 2026-01-23 00:01:37,890 | INFO     | monitor loop #362: job 0:6978788465 is in state 'finished'
[2026-01-23 01:02:11] 2026-01-23 00:01:37,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,166 | INFO     | time since job start (4676s) is within the limit (349056.0s)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 01:02:11] 2026-01-23 00:01:38,694 | INFO     | job 6978788465 has state=finished
[2026-01-23 01:02:11] 2026-01-23 00:01:38,694 | INFO     | preparing for final server update for job 6978788465 in state='finished'
[2026-01-23 01:02:11] 2026-01-23 00:01:38,694 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6978788465/jobReport.json
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | this job has now completed (state=finished)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | log transfer has been attempted: DONE
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | job 6978788465 has finished - writing final server update
[2026-01-23 01:02:11] 2026-01-23 00:01:38,696 | INFO     | total number of processed events: 400 (read)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6978788465/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | INFO     | extracted standard info from prmon json
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 01:02:11] 2026-01-23 00:01:38,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | fitting pss+swap vs Time
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | sum of square deviations: 106336877.5
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | sum of deviations: -8899343435.999998
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | mean x: 1769124248.5
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | mean y: 2428601.5714285714
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | intersect: 148060605957.37076
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | chi2: 0.16147850121883728
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | current memory leak: -83.69 B/s (using 70 data points, chi2=0.16)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,699 | INFO     | could have reported an average CPU frequency of 3776 MHz (6 samples)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | ..............................
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . Timing measurements:
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . get job = 0 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . initial setup = 3 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . payload setup = 3 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . stage-in = 0 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . payload execution = 4656 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . stage-out = 0 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | . log creation = 0 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,700 | INFO     | ..............................
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | 
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | job summary report
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | --------------------------------------------------
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | PanDA job id: 6978788465
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | task id: 48312938
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | errors: (none)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | pilot state: finished 
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | transexitcode: 0
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | exeerrorcode: 0
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | exeerrordiag: 
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | exitcode: 0
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | exitmsg: OK
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | cpuconsumptiontime: 13376 s
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | nevents: 400
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | neventsw: 0
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | pid: 2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | pgrp: 2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | corecount: 3
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | event service: False
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | sizes: {0: 2284393, 10: 2284393, 4663: 2319728, 4666: 2319922}
[2026-01-23 01:02:11] 2026-01-23 00:01:38,729 | INFO     | --------------------------------------------------
[2026-01-23 01:02:11] 2026-01-23 00:01:38,730 | INFO     | 
[2026-01-23 01:02:11] 2026-01-23 00:01:38,730 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | job 6978788465 has completed (purged errors)
[2026-01-23 01:02:11] 2026-01-23 00:01:38,743 | INFO     | overall cleanup function is called
[2026-01-23 01:02:11] 2026-01-23 00:01:39,749 | INFO     | --- collectZombieJob: --- 10, [2558692]
[2026-01-23 01:02:11] 2026-01-23 00:01:39,750 | INFO     | zombie collector waiting for pid 2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:39,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 01:02:11] 2026-01-23 00:01:39,750 | INFO     | collected zombie processes
[2026-01-23 01:02:11] 2026-01-23 00:01:39,750 | INFO     | will attempt to kill all subprocesses of pid=2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:39,804 | INFO     | process IDs to be killed: [2558692] (in reverse order)
[2026-01-23 01:02:11] 2026-01-23 00:01:39,833 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 01:02:11] 2026-01-23 00:01:39,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 01:02:11] 2026-01-23 00:01:39,835 | INFO     | did not find any defunct processes belonging to 2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:39,837 | INFO     | did not find any defunct processes belonging to 2558692
[2026-01-23 01:02:11] 2026-01-23 00:01:39,837 | INFO     | ready for new job
[2026-01-23 01:02:11] 2026-01-23 00:01:39,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 01:02:11] 2026-01-23 00:01:39,837 | INFO     | **************************************
[2026-01-23 01:02:11] 2026-01-23 00:01:39,838 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 01:02:11] 2026-01-23 00:01:39,838 | INFO     | **************************************
[2026-01-23 01:02:11] 2026-01-23 00:01:39,838 | INFO     | 
[2026-01-23 01:02:11] 2026-01-23 00:01:39,838 | INFO     | architecture information:
[2026-01-23 01:02:11] 2026-01-23 00:01:39,838 | INFO     | executing command: cat /etc/os-release
[2026-01-23 01:02:11] 2026-01-23 00:01:39,848 | INFO     | cat /etc/os-release:
[2026-01-23 01:02:11] NAME="CentOS Linux"
[2026-01-23 01:02:11] VERSION="7 (Core)"
[2026-01-23 01:02:11] ID="centos"
[2026-01-23 01:02:11] ID_LIKE="rhel fedora"
[2026-01-23 01:02:11] VERSION_ID="7"
[2026-01-23 01:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 01:02:11] ANSI_COLOR="0;31"
[2026-01-23 01:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 01:02:11] HOME_URL="https://www.centos.org/"
[2026-01-23 01:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 01:02:11] 
[2026-01-23 01:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 01:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 01:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 01:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 01:02:11] 
[2026-01-23 01:02:11] 2026-01-23 00:01:39,848 | INFO     | **************************************
[2026-01-23 01:02:11] 2026-01-23 00:01:40,351 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | INFO     | sufficient remaining disk space (378860994560 B)
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | INFO     | update_server=False
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 01:02:11] 2026-01-23 00:01:40,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:02:11] 2026-01-23 00:01:40,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 01:02:11] 2026-01-23 00:01:40,394 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 01:02:11] 2026-01-23 00:01:40,394 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 01:02:11] 2026-01-23 00:01:40,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 01:02:11] 2026-01-23 00:01:40,394 | INFO     | will abort loop
[2026-01-23 01:02:11] 2026-01-23 00:01:41,302 | INFO     | all data control threads have been joined
[2026-01-23 01:02:11] 2026-01-23 00:01:41,371 | INFO     | [job] queue monitor thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:41,371 | INFO     | [job] retrieve thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:41,387 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:41,400 | INFO     | [job] job monitor thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:41,715 | INFO     | [payload] validate_post thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:41,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 01:02:11] 2026-01-23 00:01:41,776 | INFO     | all payload control threads have been joined
[2026-01-23 01:02:11] 2026-01-23 00:01:42,008 | INFO     | all job control threads have been joined
[2026-01-23 01:02:11] 2026-01-23 00:01:42,308 | INFO     | [data] control thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,341 | INFO     | [payload] failed_post thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,543 | INFO     | [job] validate thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,599 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,652 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,782 | INFO     | [payload] control thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:42,820 | INFO     | [data] copytool_in thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:43,014 | INFO     | [job] control thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:43,726 | INFO     | [data] copytool_out thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:44,373 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:47,367 | INFO     | [monitor] cgroup control has ended
[2026-01-23 01:02:11] 2026-01-23 00:01:50,697 | INFO     | job.realtimelogging is not enabled
[2026-01-23 01:02:11] 2026-01-23 00:01:51,703 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 01:02:11] 2026-01-23 00:01:53,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638844999488)>', '<ExcThread(monitor, started 140638192379648)>']
[2026-01-23 01:02:11] 2026-01-23 00:01:58,449 | INFO     | all workflow threads have been joined
[2026-01-23 01:02:11] 2026-01-23 00:01:58,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 01:02:11] 2026-01-23 00:01:58,450 | INFO     | traces error code: 0
[2026-01-23 01:02:11] 2026-01-23 00:01:58,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | INFO     | PID=2554186 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 01:02:11] 2026-01-23 00:02:11,300 | INFO     | [monitor] control thread has ended
[2026-01-23 01:02:11] 2026-01-23 00:02:11,351 [wrapper] ==== pilot stdout END ====
[2026-01-23 01:02:11] 2026-01-23 00:02:11,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 01:02:11] 2026-01-23 00:02:11,356 [wrapper] pilotpid: 2554186
[2026-01-23 01:02:11] 2026-01-23 00:02:11,359 [wrapper] Pilot exit status: 0
[2026-01-23 01:02:11] 2026-01-23 00:02:11,367 [wrapper] pandaids: 6978788465
[2026-01-23 01:02:11] 2026-01-23 00:02:11,386 [wrapper] cleanup supervisor_pilot 2584755 2554187
[2026-01-23 01:02:11] 2026-01-23 00:02:11,388 [wrapper] Test setup, not cleaning
[2026-01-23 01:02:11] 2026-01-23 00:02:11,391 [wrapper] apfmon messages muted
[2026-01-23 01:02:11] 2026-01-23 00:02:11,393 [wrapper] ==== wrapper stdout END ====
[2026-01-23 01:02:11] 2026-01-23 00:02:11,396 [wrapper] ==== wrapper stderr END ====
[2026-01-23 01:02:11]  *** Error codes and diagnostics ***
[2026-01-23 01:02:11]     "exeErrorCode": 0,
[2026-01-23 01:02:11]     "exeErrorDiag": "",
[2026-01-23 01:02:11]     "pilotErrorCode": 0,
[2026-01-23 01:02:11]     "pilotErrorDiag": "",
[2026-01-23 01:02:11]  *** Listing of results directory ***
[2026-01-23 01:02:11] total 465084
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc    584422 Jan 21 22:48 pilot3.tar.gz
[2026-01-23 01:02:11] -rwx------ 1 boinc boinc     36322 Jan 21 22:49 runpilot2-wrapper.sh
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc      5111 Jan 21 22:49 queuedata.json
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc       100 Jan 22 23:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 01:02:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 23:43 run_atlas
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc       105 Jan 22 23:43 job.xml
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc 275741066 Jan 22 23:43 EVNT.48312936._000007.pool.root.1
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc    597783 Jan 22 23:43 input.tar.gz
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc     15845 Jan 22 23:43 start_atlas.sh
[2026-01-23 01:02:11] drwxrwx--x 2 boinc boinc      4096 Jan 22 23:43 shared
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc         0 Jan 22 23:43 boinc_setup_complete
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc      6449 Jan 22 23:43 init_data.xml
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc         0 Jan 22 23:43 boinc_lockfile
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc      2638 Jan 22 23:43 pandaJob.out
[2026-01-23 01:02:11] -rw------- 1 boinc boinc   1003905 Jan 22 23:43 agis_schedconf.cvmfs.json
[2026-01-23 01:02:11] -rw------- 1 boinc boinc   1516246 Jan 22 23:43 agis_ddmendpoints.agis.ALL.json
[2026-01-23 01:02:11] -rw------- 1 boinc boinc       427 Jan 22 23:43 workernode_map.json
[2026-01-23 01:02:11] drwx------ 5 boinc boinc      4096 Jan 22 23:43 pilot3
[2026-01-23 01:02:11] -rw------- 1 boinc boinc 194681556 Jan 23 01:01 HITS.48312938._000163.pool.root.1
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc       529 Jan 23 01:01 boinc_task_state.xml
[2026-01-23 01:02:11] -rw------- 1 boinc boinc      1032 Jan 23 01:01 memory_monitor_summary.json
[2026-01-23 01:02:11] -rw------- 1 boinc boinc    250910 Jan 23 01:01 log.48312938._000163.job.log.tgz.1
[2026-01-23 01:02:11] -rw------- 1 boinc boinc      6301 Jan 23 01:01 heartbeat.json
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc      8192 Jan 23 01:02 boinc_mmap_file
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc        27 Jan 23 01:02 wrapper_checkpoint.txt
[2026-01-23 01:02:11] -rw------- 1 boinc boinc       747 Jan 23 01:02 pilotlog.txt
[2026-01-23 01:02:11] -rw------- 1 boinc boinc        95 Jan 23 01:02 pilot_heartbeat.json
[2026-01-23 01:02:11] -rw------- 1 boinc boinc    688789 Jan 23 01:02 log.48312938._000163.job.log.1
[2026-01-23 01:02:11] -rw------- 1 boinc boinc       357 Jan 23 01:02 output.list
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc       620 Jan 23 01:02 runtime_log
[2026-01-23 01:02:11] -rw------- 1 boinc boinc    962560 Jan 23 01:02 result.tar.gz
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc      8916 Jan 23 01:02 runtime_log.err
[2026-01-23 01:02:11] -rw------- 1 boinc boinc       661 Jan 23 01:02 GZoMDmEGv28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkGzKDmkiZ6qn.diag
[2026-01-23 01:02:11] -rw-r--r-- 1 boinc boinc     21330 Jan 23 01:02 stderr.txt
[2026-01-23 01:02:11] HITS file was successfully produced:
[2026-01-23 01:02:11] -rw------- 1 boinc boinc 194681556 Jan 23 01:01 shared/HITS.pool.root.1
[2026-01-23 01:02:11]  *** Contents of shared directory: ***
[2026-01-23 01:02:11] total 460948
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc 275741066 Jan 22 23:43 ATLAS.root_0
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc    597783 Jan 22 23:43 input.tar.gz
[2026-01-23 01:02:11] -rw-r--r-- 2 boinc boinc     15845 Jan 22 23:43 start_atlas.sh
[2026-01-23 01:02:11] -rw------- 1 boinc boinc 194681556 Jan 23 01:01 HITS.pool.root.1
[2026-01-23 01:02:11] -rw------- 1 boinc boinc    962560 Jan 23 01:02 result.tar.gz
01:02:12 (2550123): run_atlas exited; CPU time 13403.135791
01:02:12 (2550123): called boinc_finish(0)

</stderr_txt>
]]>

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