Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 15:44:10 (19916): vboxwrapper version 26210
2026-01-25 15:44:10 (19916): BOINC client version: 7.16.5
2026-01-25 15:44:10 (19916): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-01-25 15:44:10 (19916): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 15:44:11 (19916): Create VM. (boinc_db52a024a15e639d, slot#2)
2026-01-25 15:44:11 (19916): Setting Memory Size for VM. (4400MB)
2026-01-25 15:44:12 (19916): Setting CPU Count for VM. (4)
2026-01-25 15:44:12 (19916): Setting Chipset Options for VM.
2026-01-25 15:44:12 (19916): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 15:44:12 (19916): Setting Boot Options for VM.
2026-01-25 15:44:13 (19916): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 15:44:13 (19916): Enabling VM Network Access.
2026-01-25 15:44:13 (19916): Disabling USB Support for VM.
2026-01-25 15:44:14 (19916): Disabling COM Port Support for VM.
2026-01-25 15:44:14 (19916): Disabling LPT Port Support for VM.
2026-01-25 15:44:14 (19916): Disabling Audio Support for VM.
2026-01-25 15:44:14 (19916): Disabling Clipboard Support for VM.
2026-01-25 15:44:15 (19916): Disabling Drag and Drop Support for VM.
2026-01-25 15:44:15 (19916): Adding storage controller(s) to VM.
2026-01-25 15:44:15 (19916): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 15:44:16 (19916): Adding VirtualBox Guest Additions to VM.
2026-01-25 15:44:16 (19916): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 15:44:16 (19916): forwarding host port 61580 to guest port 80
2026-01-25 15:44:16 (19916): Enabling remote desktop for VM.
2026-01-25 15:44:17 (19916): Enabling shared directory for VM.
2026-01-25 15:44:17 (19916): Starting VM using VBoxManage interface. (boinc_db52a024a15e639d, slot#2)
2026-01-25 15:44:22 (19916): Successfully started VM. (PID = '22520')
2026-01-25 15:44:22 (19916): Reporting VM Process ID to BOINC.
2026-01-25 15:44:22 (19916): Guest Log: BIOS: VirtualBox 5.2.44
2026-01-25 15:44:22 (19916): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 15:44:22 (19916): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 15:44:22 (19916): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 15:44:22 (19916): Detected: Web Application Enabled (http://localhost:61580)
2026-01-25 15:44:22 (19916): Detected: Remote Desktop Enabled (localhost:61581)
2026-01-25 15:44:22 (19916): Preference change detected
2026-01-25 15:44:22 (19916): Setting CPU throttle for VM. (100%)
2026-01-25 15:44:22 (19916): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 15:44:24 (19916): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 15:44:24 (19916): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 15:44:27 (19916): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 15:44:27 (19916): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 15:44:27 (19916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 15:44:33 (19916): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 15:44:33 (19916): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-25 15:44:39 (19916): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000153 main     Log opened 2026-01-25T15:44:37.289241000Z
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000256 main     OS Product: Linux
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000287 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000313 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000349 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000350 main     Process ID: 1305
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.000351 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 15:44:39 (19916): Guest Log: 00:00:00.001822 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 15:44:39 (19916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 15:44:39 (19916): Guest Log: [INFO] Mounting shared directory
2026-01-25 15:44:39 (19916): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 15:44:45 (19916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 15:44:45 (19916): Guest Log: [INFO] Detected branch: prod
2026-01-25 15:44:45 (19916): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 15:44:45 (19916): Guest Log: Copying input files
2026-01-25 15:44:48 (19916): Guest Log: Copied input files into RunAtlas.
2026-01-25 15:44:48 (19916): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 15:44:48 (19916): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 15:44:48 (19916): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 15:44:48 (19916): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 15:44:49 (19916): Guest Log: 00:00:10.005702 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 769 050 000ns (GuestNow=1 769 348 688 524 849 000 ns GuestLast=1 769 355 877 293 899 000 ns fSetTimeLastLoop=true )
2026-01-25 15:44:57 (19916): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 15:44:57 (19916): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 15:44:57 (19916): Guest Log: 2.6.3.0 1582 0 30172 155510 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 15:44:59 (19916): Guest Log: copied the webapp to /var/www
2026-01-25 15:44:59 (19916): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-25 15:44:59 (19916): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-25 15:44:59 (19916): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 15:44:59 (19916): Guest Log:  *** Starting ATLAS job. (PandaID=6977477757 taskID=48301086) ***
2026-01-25 17:24:26 (19916): Status Report: Elapsed Time: '6000.000000'
2026-01-25 17:24:26 (19916): Status Report: CPU Time: '21686.984375'
2026-01-25 19:04:31 (19916): Status Report: Elapsed Time: '12000.000000'
2026-01-25 19:04:31 (19916): Status Report: CPU Time: '44449.531250'
2026-01-25 19:05:20 (19916): Guest Log:  *** Job finished ***
2026-01-25 19:05:20 (19916): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:08,283 | INFO     | all workflow threads have been joined
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:08,283 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:08,283 | INFO     | traces error code: 0
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:08,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,004 | INFO     | PID=5984 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,006 | INFO     | found 0 job(s) in 20 queues
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,006 | INFO     | [monitor] control thread has ended
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,119 [wrapper] ==== pilot stdout END ====
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,124 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,129 [wrapper] pilotpid: 5984
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,135 [wrapper] Pilot exit status: 0
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,182 [wrapper] pandaids: 6977477757
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,213 [wrapper] cleanup supervisor_pilot 27322 5985
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,223 [wrapper] Test setup, not cleaning
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,229 [wrapper] apfmon messages muted
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,235 [wrapper] ==== wrapper stdout END ====
2026-01-25 19:05:20 (19916): Guest Log: 2026-01-25 17:05:20,239 [wrapper] ==== wrapper stderr END ====
2026-01-25 19:05:20 (19916): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 19:05:20 (19916): Guest Log:     "exeErrorCode": 0,
2026-01-25 19:05:20 (19916): Guest Log:     "exeErrorDiag": "",
2026-01-25 19:05:20 (19916): Guest Log:     "pilotErrorCode": 0,
2026-01-25 19:05:20 (19916): Guest Log:     "pilotErrorDiag": "",
2026-01-25 19:05:20 (19916): Guest Log:  *** Listing of results directory ***
2026-01-25 19:05:20 (19916): Guest Log: total 182572
2026-01-25 19:05:20 (19916): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 22 02:30 pilot3.tar.gz
2026-01-25 19:05:20 (19916): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 22 02:31 runpilot2-wrapper.sh
2026-01-25 19:05:20 (19916): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 22 02:32 queuedata.json
2026-01-25 19:05:20 (19916): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 Jan 25 13:44 init_data.xml
2026-01-25 19:05:20 (19916): Guest Log: -rwxr-xr-x. 1 atlas atlas    597758 Jan 25 13:44 input.tar.gz
2026-01-25 19:05:20 (19916): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 13:44 start_atlas.sh
2026-01-25 19:05:20 (19916): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 13:44 EVNT.48301084._000084.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 19:05:20 (19916): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 25 13:44 pandaJob.out
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas   1004254 Jan 25 13:45 agis_schedconf.cvmfs.json
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas       428 Jan 25 13:45 workernode_map.json
2026-01-25 19:05:20 (19916): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 13:45 pilot3
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas 178966538 Jan 25 17:04 HITS.48301086._004180.pool.root.1
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas      1046 Jan 25 17:04 memory_monitor_summary.json
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 17:04 agis_ddmendpoints.agis.ALL.json
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas    388271 Jan 25 17:04 log.48301086._004180.job.log.tgz.1
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas      6377 Jan 25 17:04 heartbeat.json
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 17:05 pilot_heartbeat.json
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas       744 Jan 25 17:05 pilotlog.txt
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas   1669668 Jan 25 17:05 log.48301086._004180.job.log.1
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas       357 Jan 25 17:05 output.list
2026-01-25 19:05:20 (19916): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 17:05 runtime_log
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas   2078720 Jan 25 17:05 result.tar.gz
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas       670 Jan 25 17:05 WFYKDmbez28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK7sKDmY0plzm.diag
2026-01-25 19:05:20 (19916): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Jan 25 17:05 runtime_log.err
2026-01-25 19:05:20 (19916): Guest Log: Looking for outputfile HITS.48301086._004180.pool.root.1
2026-01-25 19:05:20 (19916): Guest Log: HITS file was successfully produced
2026-01-25 19:05:20 (19916): Guest Log: -rw-------. 1 atlas atlas 178966538 Jan 25 17:04 /home/atlas/RunAtlas/HITS.48301086._004180.pool.root.1
2026-01-25 19:05:22 (19916): Guest Log: Successfully finished the ATLAS job!
2026-01-25 19:05:22 (19916): Guest Log: Copying the results back to the shared directory!
2026-01-25 19:05:22 (19916): Guest Log:  *** Contents of shared directory: ***
2026-01-25 19:05:22 (19916): Guest Log: total 655684
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root 489741374 Jan 25 13:44 ATLAS.root_0
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root 178966538 Jan 25 17:05 HITS.pool.root.1
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root      8897 Jan 25 13:44 init_data.xml
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root    597758 Jan 22 07:44 input.tar.gz
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root   2078720 Jan 25 17:05 result.tar.gz
2026-01-25 19:05:22 (19916): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 22 07:44 start_atlas.sh
2026-01-25 19:05:22 (19916): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 19:05:22 (19916): VM Completion File Detected.
2026-01-25 19:05:22 (19916): Powering off VM.
2026-01-25 19:05:23 (19916): Successfully stopped VM.
2026-01-25 19:05:23 (19916): Deregistering VM. (boinc_db52a024a15e639d, slot#2)
2026-01-25 19:05:23 (19916): Removing network bandwidth throttle group from VM.
2026-01-25 19:05:23 (19916): Removing VM from VirtualBox.
2026-01-25 19:05:29 (19916): called boinc_finish(0)

</stderr_txt>
]]>

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