Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:08:33 (421177): wrapper (7.7.26015): starting
16:08:33 (421177): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 16:08:33] Arguments: --nthreads 3
[2026-01-22 16:08:33] Threads: 3
[2026-01-22 16:08:33] Checking for CVMFS
[2026-01-22 16:08:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 16:08:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 16:08:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 16:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 16:08:34] 2.9.2.0 10102 2708 65980 155402 3 49 19646613 36864001 0 130560 0 1161978 99.987 64242 10231 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 16:08:34] CVMFS is ok
[2026-01-22 16:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 16:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 16:08:34] Further information can be found at the LHC@home message board.
[2026-01-22 16:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 16:08:34] Checking for apptainer binary...
[2026-01-22 16:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 16:08:34] Running /usr/bin/apptainer --version
[2026-01-22 16:08:34] apptainer version 1.3.6-6.1
[2026-01-22 16:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 16:08:35] atlasA226
[2026-01-22 16:08:35] apptainer works
[2026-01-22 16:08:35] Set ATHENA_PROC_NUMBER=3
[2026-01-22 16:08:35] Set ATHENA_CORE_NUMBER=3
[2026-01-22 16:08:35] Starting ATLAS job with PandaID=6976470103
[2026-01-22 16:08:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 20:19:17]  *** The last 200 lines of the pilot log: ***
[2026-01-22 20:19:17] 2026-01-22 19:18:20,263 | INFO     | sum of square deviations: 4560048290.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | sum of deviations: 173535826149.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | mean x: 1769102022.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | mean y: 2182802.212244898
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | intersect: -67322231634.9946
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | chi2: 7.446700592613855
[2026-01-22 20:19:17] 2026-01-22 19:18:20,264 | INFO     | sum of square deviations: 4286517580.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | sum of deviations: 192128446504.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | mean x: 1769101869.5
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | mean y: 2193015.4166666665
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | intersect: -79291729743.75633
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | chi2: 6.58239944990734
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | current chi2=6.58239944990734 (change=11.606497830244273 %)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | right removable region: 239
[2026-01-22 20:19:17] 2026-01-22 19:18:20,265 | INFO     | sum of square deviations: 4286517580.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | sum of deviations: 100887441737.5
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | mean x: 1769102174.5
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | mean y: 2223244.7958333334
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | intersect: -41635350666.0881
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | chi2: 3.063778044573875
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | current chi2=3.063778044573875 (change=58.85724145250665 %)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,266 | INFO     | sum of square deviations: 4024149870.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | sum of deviations: 53750281638.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | mean x: 1769102327.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | mean y: 2250612.69787234
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | intersect: -23627522480.89001
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | chi2: 1.4491341274269867
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | current chi2=1.4491341274269867 (change=52.7010734346933 %)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,267 | INFO     | sum of square deviations: 3772712597.5
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | sum of deviations: 29688335342.000008
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | mean x: 1769102479.5
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | mean y: 2265114.6782608693
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | intersect: -13919205527.046043
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | chi2: 0.9340582881005025
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | current chi2=0.9340582881005025 (change=35.54369672053947 %)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,268 | INFO     | sum of square deviations: 3531973200.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | sum of deviations: 23875735561.000008
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | mean x: 1769102632.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | mean y: 2268794.1555555556
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | intersect: -11956663006.884472
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | chi2: 0.9240542005683403
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | current chi2=0.9240542005683403 (change=1.0710346088258018 %)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | left removable region: 40
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | sum of square deviations: 2443580700.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | sum of deviations: 25682195844.000034
[2026-01-22 20:19:17] 2026-01-22 19:18:20,269 | INFO     | mean x: 1769103059.0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | mean y: 2294959.9748743717
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | intersect: -18591095972.216377
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | chi2: 0.008579727915670328
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | current memory leak: 10.51 B/s (using 199 data points, chi2=0.01)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | could have reported an average CPU frequency of 4300 MHz (12 samples)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | ..............................
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . Timing measurements:
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . get job = 0 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . initial setup = 4 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . payload setup = 36 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . stage-in = 0 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . payload execution = 14917 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . stage-out = 0 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | . log creation = 0 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,270 | INFO     | ..............................
[2026-01-22 20:19:17] 2026-01-22 19:18:20,297 | INFO     | 
[2026-01-22 20:19:17] 2026-01-22 19:18:20,297 | INFO     | job summary report
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | --------------------------------------------------
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | PanDA job id: 6976470103
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | task id: 47961985
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | errors: (none)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | pilot state: finished 
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | transexitcode: 0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | exeerrorcode: 0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | exeerrordiag: 
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | exitcode: 0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | exitmsg: OK
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | cpuconsumptiontime: 42220 s
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | nevents: 350
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | neventsw: 0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | pid: 429665
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | pgrp: 429665
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | corecount: 3
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | event service: False
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | sizes: {0: 2284815, 10: 2284815, 14957: 2316798, 14959: 2326044}
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | --------------------------------------------------
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | 
[2026-01-22 20:19:17] 2026-01-22 19:18:20,298 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | job 6976470103 has completed (purged errors)
[2026-01-22 20:19:17] 2026-01-22 19:18:20,311 | INFO     | overall cleanup function is called
[2026-01-22 20:19:17] 2026-01-22 19:18:21,319 | INFO     | --- collectZombieJob: --- 10, [429665]
[2026-01-22 20:19:17] 2026-01-22 19:18:21,319 | INFO     | zombie collector waiting for pid 429665
[2026-01-22 20:19:17] 2026-01-22 19:18:21,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 20:19:17] 2026-01-22 19:18:21,320 | INFO     | collected zombie processes
[2026-01-22 20:19:17] 2026-01-22 19:18:21,320 | INFO     | will attempt to kill all subprocesses of pid=429665
[2026-01-22 20:19:17] 2026-01-22 19:18:21,360 | INFO     | process IDs to be killed: [429665] (in reverse order)
[2026-01-22 20:19:17] 2026-01-22 19:18:21,386 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 20:19:17] 2026-01-22 19:18:21,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 20:19:17] 2026-01-22 19:18:21,387 | INFO     | did not find any defunct processes belonging to 429665
[2026-01-22 20:19:17] 2026-01-22 19:18:21,388 | INFO     | did not find any defunct processes belonging to 429665
[2026-01-22 20:19:17] 2026-01-22 19:18:21,388 | INFO     | ready for new job
[2026-01-22 20:19:17] 2026-01-22 19:18:21,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 20:19:17] 2026-01-22 19:18:21,389 | INFO     | **************************************
[2026-01-22 20:19:17] 2026-01-22 19:18:21,389 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 20:19:17] 2026-01-22 19:18:21,389 | INFO     | **************************************
[2026-01-22 20:19:17] 2026-01-22 19:18:21,389 | INFO     | 
[2026-01-22 20:19:17] 2026-01-22 19:18:21,390 | INFO     | architecture information:
[2026-01-22 20:19:17] 2026-01-22 19:18:21,390 | INFO     | executing command: cat /etc/os-release
[2026-01-22 20:19:17] 2026-01-22 19:18:21,400 | INFO     | cat /etc/os-release:
[2026-01-22 20:19:17] NAME="CentOS Linux"
[2026-01-22 20:19:17] VERSION="7 (Core)"
[2026-01-22 20:19:17] ID="centos"
[2026-01-22 20:19:17] ID_LIKE="rhel fedora"
[2026-01-22 20:19:17] VERSION_ID="7"
[2026-01-22 20:19:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 20:19:17] ANSI_COLOR="0;31"
[2026-01-22 20:19:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 20:19:17] HOME_URL="https://www.centos.org/"
[2026-01-22 20:19:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 20:19:17] 
[2026-01-22 20:19:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 20:19:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 20:19:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 20:19:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 20:19:17] 
[2026-01-22 20:19:17] 2026-01-22 19:18:21,400 | INFO     | **************************************
[2026-01-22 20:19:17] 2026-01-22 19:18:21,904 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | INFO     | sufficient remaining disk space (334795636736 B)
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | INFO     | update_server=False
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 20:19:17] 2026-01-22 19:18:21,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 20:19:17] 2026-01-22 19:18:21,968 | INFO     | all job control threads have been joined
[2026-01-22 20:19:17] 2026-01-22 19:18:22,289 | INFO     | all payload control threads have been joined
[2026-01-22 20:19:17] 2026-01-22 19:18:22,831 | INFO     | all data control threads have been joined
[2026-01-22 20:19:17] 2026-01-22 19:18:22,923 | INFO     | [job] retrieve thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:22,924 | INFO     | [job] queue monitor thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:22,973 | INFO     | [job] control thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,031 | WARNING  | process 429665 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 20:19:17] 2026-01-22 19:18:23,060 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 20:19:17] 2026-01-22 19:18:23,094 | INFO     | number of running child processes to parent process 429665: 1
[2026-01-22 20:19:17] 2026-01-22 19:18:23,094 | INFO     | maximum number of monitored processes: 8
[2026-01-22 20:19:17] 2026-01-22 19:18:23,094 | INFO     | aborting job monitoring since job object (job id=6976470103) has expired
[2026-01-22 20:19:17] 2026-01-22 19:18:23,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 20:19:17] 2026-01-22 19:18:23,095 | INFO     | will abort loop
[2026-01-22 20:19:17] 2026-01-22 19:18:23,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 20:19:17] 2026-01-22 19:18:23,295 | INFO     | [payload] control thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,374 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,744 | INFO     | [payload] failed_post thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,746 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,837 | INFO     | [data] control thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,877 | INFO     | [job] validate thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:23,889 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:24,100 | INFO     | [job] job monitor thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:24,161 | INFO     | [data] copytool_in thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:24,274 | INFO     | [payload] validate_post thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:24,403 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:25,245 | INFO     | [data] copytool_out thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:25,924 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 20:19:17] 2026-01-22 19:18:52,915 | INFO     | PID=425232 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-22 20:19:17] 2026-01-22 19:18:52,915 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 20:19:17] 2026-01-22 19:18:52,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 20:19:17] 2026-01-22 19:18:52,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 20:19:17] 2026-01-22 19:19:10,885 | INFO     | [monitor] cgroup control has ended
[2026-01-22 20:19:17] 2026-01-22 19:19:11,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800742111040)>', '<ExcThread(monitor, started 139799969130240)>']
[2026-01-22 20:19:17] 2026-01-22 19:19:12,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 20:19:17] 2026-01-22 19:19:12,013 | INFO     | [monitor] control thread has ended
[2026-01-22 20:19:17] 2026-01-22 19:19:16,864 | INFO     | all workflow threads have been joined
[2026-01-22 20:19:17] 2026-01-22 19:19:16,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 20:19:17] 2026-01-22 19:19:16,865 | INFO     | traces error code: 0
[2026-01-22 20:19:17] 2026-01-22 19:19:16,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 20:19:17] 2026-01-22 19:19:16,912 [wrapper] ==== pilot stdout END ====
[2026-01-22 20:19:17] 2026-01-22 19:19:16,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 20:19:17] 2026-01-22 19:19:16,918 [wrapper] pilotpid: 425232
[2026-01-22 20:19:17] 2026-01-22 19:19:16,921 [wrapper] Pilot exit status: 0
[2026-01-22 20:19:17] 2026-01-22 19:19:16,929 [wrapper] pandaids: 6976470103
[2026-01-22 20:19:17] 2026-01-22 19:19:16,947 [wrapper] cleanup supervisor_pilot  437642 425233
[2026-01-22 20:19:17] 2026-01-22 19:19:16,950 [wrapper] Test setup, not cleaning
[2026-01-22 20:19:17] 2026-01-22 19:19:16,953 [wrapper] apfmon messages muted
[2026-01-22 20:19:17] 2026-01-22 19:19:16,956 [wrapper] ==== wrapper stdout END ====
[2026-01-22 20:19:17] 2026-01-22 19:19:16,958 [wrapper] ==== wrapper stderr END ====
[2026-01-22 20:19:17]  *** Error codes and diagnostics ***
[2026-01-22 20:19:17]     "exeErrorCode": 0,
[2026-01-22 20:19:17]     "exeErrorDiag": "",
[2026-01-22 20:19:17]     "pilotErrorCode": 0,
[2026-01-22 20:19:17]     "pilotErrorDiag": "",
[2026-01-22 20:19:17]  *** Listing of results directory ***
[2026-01-22 20:19:17] total 750832
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc    584422 Jan 20 15:43 pilot3.tar.gz
[2026-01-22 20:19:17] -rwx------ 1 boinc boinc     36322 Jan 20 15:56 runpilot2-wrapper.sh
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc      5111 Jan 20 15:57 queuedata.json
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc       100 Jan 22 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 20:19:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 16:08 run_atlas
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc       105 Jan 22 16:08 job.xml
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc 412076156 Jan 22 16:08 EVNT.47961981._000059.pool.root.1
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc      6680 Jan 22 16:08 init_data.xml
[2026-01-22 20:19:17] drwxrwx--x 2 boinc boinc      4096 Jan 22 16:08 shared
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc    597967 Jan 22 16:08 input.tar.gz
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc     15845 Jan 22 16:08 start_atlas.sh
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc         0 Jan 22 16:08 boinc_lockfile
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc      2876 Jan 22 16:08 pandaJob.out
[2026-01-22 20:19:17] -rw------- 1 boinc boinc   1002389 Jan 22 16:08 agis_schedconf.cvmfs.json
[2026-01-22 20:19:17] -rw------- 1 boinc boinc       429 Jan 22 16:08 workernode_map.json
[2026-01-22 20:19:17] drwx------ 5 boinc boinc      4096 Jan 22 16:08 pilot3
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc       532 Jan 22 20:15 boinc_task_state.xml
[2026-01-22 20:19:17] -rw------- 1 boinc boinc        95 Jan 22 20:18 pilot_heartbeat.json
[2026-01-22 20:19:17] -rw------- 1 boinc boinc 346832331 Jan 22 20:18 HITS.47961985._001783.pool.root.1
[2026-01-22 20:19:17] -rw------- 1 boinc boinc      1024 Jan 22 20:18 memory_monitor_summary.json
[2026-01-22 20:19:17] -rw------- 1 boinc boinc   1516246 Jan 22 20:18 agis_ddmendpoints.agis.ALL.json
[2026-01-22 20:19:17] -rw------- 1 boinc boinc    869947 Jan 22 20:18 log.47961985._001783.job.log.tgz.1
[2026-01-22 20:19:17] -rw------- 1 boinc boinc      6914 Jan 22 20:18 heartbeat.json
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc        28 Jan 22 20:19 wrapper_checkpoint.txt
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc      8192 Jan 22 20:19 boinc_mmap_file
[2026-01-22 20:19:17] -rw------- 1 boinc boinc      5269 Jan 22 20:19 pilotlog.txt
[2026-01-22 20:19:17] -rw------- 1 boinc boinc   2129995 Jan 22 20:19 log.47961985._001783.job.log.1
[2026-01-22 20:19:17] -rw------- 1 boinc boinc       353 Jan 22 20:19 output.list
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc       620 Jan 22 20:19 runtime_log
[2026-01-22 20:19:17] -rw------- 1 boinc boinc   3020800 Jan 22 20:19 result.tar.gz
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc      8912 Jan 22 20:19 runtime_log.err
[2026-01-22 20:19:17] -rw------- 1 boinc boinc       665 Jan 22 20:19 89DNDmQKS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgZvKDmYt8HXn.diag
[2026-01-22 20:19:17] -rw-r--r-- 1 boinc boinc     20963 Jan 22 20:19 stderr.txt
[2026-01-22 20:19:17] HITS file was successfully produced:
[2026-01-22 20:19:17] -rw------- 1 boinc boinc 346832331 Jan 22 20:18 shared/HITS.pool.root.1
[2026-01-22 20:19:17]  *** Contents of shared directory: ***
[2026-01-22 20:19:17] total 744684
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc 412076156 Jan 22 16:08 ATLAS.root_0
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc    597967 Jan 22 16:08 input.tar.gz
[2026-01-22 20:19:17] -rw-r--r-- 2 boinc boinc     15845 Jan 22 16:08 start_atlas.sh
[2026-01-22 20:19:17] -rw------- 1 boinc boinc 346832331 Jan 22 20:18 HITS.pool.root.1
[2026-01-22 20:19:17] -rw------- 1 boinc boinc   3020800 Jan 22 20:19 result.tar.gz
20:19:19 (421177): run_atlas exited; CPU time 42267.403623
20:19:19 (421177): called boinc_finish(0)

</stderr_txt>
]]>

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