Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:35 (3704746): wrapper (7.7.26015): starting
00:04:35 (3704746): wrapper: running run_atlas (--nthreads 8)
[2026-01-22 00:04:35] Arguments: --nthreads 8
[2026-01-22 00:04:35] Threads: 8
[2026-01-22 00:04:35] Checking for CVMFS
[2026-01-22 00:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 00:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 00:04:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 00:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 00:04:40] 2.13.3.0 14259 110248 191092 155392 2 1220 27436084 32935936 33906 16776704 0 521251979 99.702 381699901 32470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-22 00:04:40] CVMFS is ok
[2026-01-22 00:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 00:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 00:04:40] Further information can be found at the LHC@home message board.
[2026-01-22 00:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 00:04:40] Checking for apptainer binary...
[2026-01-22 00:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 00:04:40] Running /usr/bin/apptainer --version
[2026-01-22 00:04:40] apptainer version 1.4.5-2.el9
[2026-01-22 00:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 00:04:41] c-4-36.aglt2.org
[2026-01-22 00:04:41] apptainer works
[2026-01-22 00:04:41] Set ATHENA_PROC_NUMBER=8
[2026-01-22 00:04:41] Set ATHENA_CORE_NUMBER=8
[2026-01-22 00:04:41] Starting ATLAS job with PandaID=6978965813
[2026-01-22 00:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 18:13:30]  *** The last 200 lines of the pilot log: ***
[2026-01-24 18:13:30] 2026-01-24 23:12:51,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 18:13:30] 2026-01-24 23:12:51,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 18:13:30] 2026-01-24 23:12:51,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 18:13:30] 2026-01-24 23:12:52,128 | INFO     | fitting pss+swap vs Time
[2026-01-24 18:13:30] 2026-01-24 23:12:52,143 | INFO     | sum of square deviations: 18365201750958.27
[2026-01-24 18:13:30] 2026-01-24 23:12:52,751 | INFO     | sum of deviations: 3756578645508.6445
[2026-01-24 18:13:30] 2026-01-24 23:12:52,751 | INFO     | mean x: 1769177438.6883018
[2026-01-24 18:13:30] 2026-01-24 23:12:52,751 | INFO     | mean y: 2603773.8894304773
[2026-01-24 18:13:30] 2026-01-24 23:12:52,752 | INFO     | intersect: -359279219.6336531
[2026-01-24 18:13:30] 2026-01-24 23:12:52,756 | INFO     | chi2: 7.32756524497718
[2026-01-24 18:13:30] 2026-01-24 23:12:52,761 | INFO     | sum of square deviations: 18294620807758.75
[2026-01-24 18:13:30] 2026-01-24 23:12:53,084 | INFO     | time since job start (237929s) is within the limit (349056.0s)
[2026-01-24 18:13:30] 2026-01-24 23:12:53,328 | INFO     | sum of deviations: 3999247049954.683
[2026-01-24 18:13:30] 2026-01-24 23:12:53,328 | INFO     | mean x: 1769177286.189828
[2026-01-24 18:13:30] 2026-01-24 23:12:53,329 | INFO     | mean y: 2604297.628307218
[2026-01-24 18:13:30] 2026-01-24 23:12:53,329 | INFO     | intersect: -384142009.76937515
[2026-01-24 18:13:30] 2026-01-24 23:12:53,333 | INFO     | chi2: 6.636338466455888
[2026-01-24 18:13:30] 2026-01-24 23:12:53,334 | INFO     | current chi2=6.636338466455888 (change=9.433239492409925 %)
[2026-01-24 18:13:30] 2026-01-24 23:12:53,334 | INFO     | right removable region: 3892
[2026-01-24 18:13:30] 2026-01-24 23:12:53,338 | INFO     | sum of square deviations: 18294618695452.91
[2026-01-24 18:13:30] 2026-01-24 23:12:53,701 | INFO     | sum of deviations: 2449691166070.88
[2026-01-24 18:13:30] 2026-01-24 23:12:53,704 | INFO     | mean x: 1769177591.1890574
[2026-01-24 18:13:30] 2026-01-24 23:12:53,704 | INFO     | mean y: 2606597.2977138455
[2026-01-24 18:13:30] 2026-01-24 23:12:53,704 | INFO     | intersect: -234290316.9530097
[2026-01-24 18:13:30] 2026-01-24 23:12:53,713 | INFO     | chi2: 3.686037344820799
[2026-01-24 18:13:30] 2026-01-24 23:12:53,713 | INFO     | current chi2=3.686037344820799 (change=49.69628762640546 %)
[2026-01-24 18:13:30] 2026-01-24 23:12:53,719 | INFO     | sum of square deviations: 18224216238041.16
[2026-01-24 18:13:30] 2026-01-24 23:12:53,754 | INFO     | monitor loop #7100: job 0:6978965813 is in state 'finished'
[2026-01-24 18:13:30] 2026-01-24 23:12:53,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:13:30] 2026-01-24 23:12:54,069 | INFO     | sum of deviations: 1576642870941.5674
[2026-01-24 18:13:30] 2026-01-24 23:12:54,069 | INFO     | mean x: 1769177743.6903293
[2026-01-24 18:13:30] 2026-01-24 23:12:54,069 | INFO     | mean y: 2608488.2039609053
[2026-01-24 18:13:30] 2026-01-24 23:12:54,069 | INFO     | intersect: -150449478.21740666
[2026-01-24 18:13:30] 2026-01-24 23:12:54,075 | INFO     | chi2: 2.0479918855608417
[2026-01-24 18:13:30] 2026-01-24 23:12:54,076 | INFO     | current chi2=2.0479918855608417 (change=44.43919868477602 %)
[2026-01-24 18:13:30] 2026-01-24 23:12:54,081 | INFO     | sum of square deviations: 18153995095932.215
[2026-01-24 18:13:30] 2026-01-24 23:12:55,064 | INFO     | sum of deviations: 1110273983716.6926
[2026-01-24 18:13:30] 2026-01-24 23:12:55,065 | INFO     | mean x: 1769177896.1910894
[2026-01-24 18:13:30] 2026-01-24 23:12:55,065 | INFO     | mean y: 2609501.0084985835
[2026-01-24 18:13:30] 2026-01-24 23:12:55,065 | INFO     | intersect: -105591045.50083339
[2026-01-24 18:13:30] 2026-01-24 23:12:55,070 | INFO     | chi2: 1.5971464299119944
[2026-01-24 18:13:30] 2026-01-24 23:12:55,070 | INFO     | current chi2=1.5971464299119944 (change=22.014025486501545 %)
[2026-01-24 18:13:30] 2026-01-24 23:12:55,070 | INFO     | left removable region: 30
[2026-01-24 18:13:30] 2026-01-24 23:12:55,075 | INFO     | sum of square deviations: 17861041670595.73
[2026-01-24 18:13:30] 2026-01-24 23:12:56,303 | INFO     | monitor loop #7101: job 0:6978965813 is in state 'finished'
[2026-01-24 18:13:30] 2026-01-24 23:12:56,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:13:30] 2026-01-24 23:12:56,520 | INFO     | sum of deviations: 506098390222.4122
[2026-01-24 18:13:30] 2026-01-24 23:12:56,521 | INFO     | mean x: 1769178170.6916106
[2026-01-24 18:13:30] 2026-01-24 23:12:56,521 | INFO     | mean y: 2611888.9818746764
[2026-01-24 18:13:30] 2026-01-24 23:12:56,521 | INFO     | intersect: -47518346.46109498
[2026-01-24 18:13:30] 2026-01-24 23:12:56,526 | INFO     | chi2: 0.38129439957476785
[2026-01-24 18:13:30] 2026-01-24 23:12:56,527 | INFO     | current memory leak: 0.03 B/s (using 3862 data points, chi2=0.38)
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | could have reported an average CPU frequency of 2600 MHz (133 samples)
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | ..............................
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | . Timing measurements:
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | . get job = 1 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | . initial setup = 59 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,530 | INFO     | . payload setup = 75 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,531 | INFO     | . stage-in = 0 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,531 | INFO     | . payload execution = 237819 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,531 | INFO     | . stage-out = 4 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,531 | INFO     | . log creation = 0 s
[2026-01-24 18:13:30] 2026-01-24 23:12:56,531 | INFO     | ..............................
[2026-01-24 18:13:30] 2026-01-24 23:12:57,001 | INFO     | 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,001 | INFO     | job summary report
[2026-01-24 18:13:30] 2026-01-24 23:12:57,001 | INFO     | --------------------------------------------------
[2026-01-24 18:13:30] 2026-01-24 23:12:57,002 | INFO     | PanDA job id: 6978965813
[2026-01-24 18:13:30] 2026-01-24 23:12:57,002 | INFO     | task id: 48313436
[2026-01-24 18:13:30] 2026-01-24 23:12:57,002 | INFO     | errors: (none)
[2026-01-24 18:13:30] 2026-01-24 23:12:57,002 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,002 | INFO     | pilot state: finished 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,008 | INFO     | transexitcode: 0
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | exeerrorcode: 0
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | exeerrordiag: 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | exitcode: 0
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | exitmsg: OK
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | cpuconsumptiontime: 90185 s
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | nevents: 400
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | neventsw: 0
[2026-01-24 18:13:30] 2026-01-24 23:12:57,009 | INFO     | pid: 3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | pgrp: 3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | corecount: 8
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | event service: False
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | sizes: {0: 2283279, 4: 2283880, 5: 2283964, 6: 2284020, 7: 2284509, 8: 2284509, 9: 2284665, 237899: 2398723, 237904: 2407777, 237922: 2407915}
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | --------------------------------------------------
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,010 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-24 18:13:30] 2026-01-24 23:12:57,208 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,208 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,208 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,208 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 18:13:30] 2026-01-24 23:12:57,210 | INFO     | job 6978965813 has completed (purged errors)
[2026-01-24 18:13:30] 2026-01-24 23:12:57,211 | INFO     | overall cleanup function is called
[2026-01-24 18:13:30] 2026-01-24 23:12:57,365 | INFO     | PID=3724552 has CPU usage=22.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-24 18:13:30] 2026-01-24 23:12:57,365 | INFO     | .. there are 39 such processes running
[2026-01-24 18:13:30] 2026-01-24 23:12:58,249 | INFO     | --- collectZombieJob: --- 10, [3764548]
[2026-01-24 18:13:30] 2026-01-24 23:12:58,249 | INFO     | zombie collector waiting for pid 3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:58,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 18:13:30] 2026-01-24 23:12:58,249 | INFO     | collected zombie processes
[2026-01-24 18:13:30] 2026-01-24 23:12:58,249 | INFO     | will attempt to kill all subprocesses of pid=3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:58,821 | INFO     | process IDs to be killed: [3764548] (in reverse order)
[2026-01-24 18:13:30] 2026-01-24 23:12:58,965 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 18:13:30] 2026-01-24 23:12:58,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 18:13:30] 2026-01-24 23:12:58,981 | INFO     | did not find any defunct processes belonging to 3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:58,998 | INFO     | did not find any defunct processes belonging to 3764548
[2026-01-24 18:13:30] 2026-01-24 23:12:58,998 | INFO     | ready for new job
[2026-01-24 18:13:30] 2026-01-24 23:12:58,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 18:13:30] 2026-01-24 23:12:59,007 | INFO     | **************************************
[2026-01-24 18:13:30] 2026-01-24 23:12:59,008 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 18:13:30] 2026-01-24 23:12:59,008 | INFO     | **************************************
[2026-01-24 18:13:30] 2026-01-24 23:12:59,008 | INFO     | 
[2026-01-24 18:13:30] 2026-01-24 23:12:59,010 | INFO     | architecture information:
[2026-01-24 18:13:30] 2026-01-24 23:12:59,010 | INFO     | executing command: cat /etc/os-release
[2026-01-24 18:13:30] 2026-01-24 23:12:59,076 | INFO     | cat /etc/os-release:
[2026-01-24 18:13:30] NAME="CentOS Linux"
[2026-01-24 18:13:30] VERSION="7 (Core)"
[2026-01-24 18:13:30] ID="centos"
[2026-01-24 18:13:30] ID_LIKE="rhel fedora"
[2026-01-24 18:13:30] VERSION_ID="7"
[2026-01-24 18:13:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 18:13:30] ANSI_COLOR="0;31"
[2026-01-24 18:13:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 18:13:30] HOME_URL="https://www.centos.org/"
[2026-01-24 18:13:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 18:13:30] 
[2026-01-24 18:13:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 18:13:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 18:13:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 18:13:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 18:13:30] 
[2026-01-24 18:13:30] 2026-01-24 23:12:59,076 | INFO     | **************************************
[2026-01-24 18:13:30] 2026-01-24 23:12:59,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-24 18:13:30] 2026-01-24 23:12:59,698 | INFO     | sufficient remaining disk space (73819750400 B)
[2026-01-24 18:13:30] 2026-01-24 23:12:59,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 18:13:30] 2026-01-24 23:12:59,698 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 18:13:30] 2026-01-24 23:12:59,698 | INFO     | update_server=False
[2026-01-24 18:13:30] 2026-01-24 23:12:59,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 18:13:30] 2026-01-24 23:12:59,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 18:13:30] 2026-01-24 23:12:59,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:13:30] 2026-01-24 23:12:59,832 | INFO     | aborting loop
[2026-01-24 18:13:30] 2026-01-24 23:12:59,931 | INFO     | all job control threads have been joined
[2026-01-24 18:13:30] 2026-01-24 23:13:00,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 18:13:30] 2026-01-24 23:13:00,664 | INFO     | all payload control threads have been joined
[2026-01-24 18:13:30] 2026-01-24 23:13:00,707 | INFO     | [job] retrieve thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:00,715 | INFO     | all data control threads have been joined
[2026-01-24 18:13:30] 2026-01-24 23:13:00,837 | INFO     | [job] job monitor thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:00,937 | INFO     | [job] control thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,036 | INFO     | [job] validate thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,037 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,240 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,414 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,514 | INFO     | [payload] validate_post thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,617 | INFO     | [data] copytool_in thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,670 | INFO     | [payload] control thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,694 | INFO     | [payload] failed_post thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,724 | INFO     | [data] control thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:01,725 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:02,011 | INFO     | [data] copytool_out thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:02,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:13:30] 2026-01-24 23:13:03,033 | INFO     | [job] queue monitor thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:03,713 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 18:13:30] 2026-01-24 23:13:14,170 | INFO     | [monitor] cgroup control has ended
[2026-01-24 18:13:30] 2026-01-24 23:13:14,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678450198336)>', '<ExcThread(monitor, started 139677948430080)>']
[2026-01-24 18:13:30] 2026-01-24 23:13:19,417 | INFO     | all workflow threads have been joined
[2026-01-24 18:13:30] 2026-01-24 23:13:19,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 18:13:30] 2026-01-24 23:13:19,420 | INFO     | traces error code: 0
[2026-01-24 18:13:30] 2026-01-24 23:13:19,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 18:13:30] 2026-01-24 23:13:30,146 | INFO     | PID=3724552 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 18:13:30] 2026-01-24 23:13:30,146 | INFO     | .. there are 39 such processes running
[2026-01-24 18:13:30] 2026-01-24 23:13:30,146 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 18:13:30] 2026-01-24 23:13:30,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 18:13:30] 2026-01-24 23:13:30,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 18:13:30] 2026-01-24 23:13:30,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 18:13:30] 2026-01-24 23:13:30,147 | INFO     | [monitor] control thread has ended
[2026-01-24 18:13:30] 2026-01-24 23:13:30,308 [wrapper] ==== pilot stdout END ====
[2026-01-24 18:13:30] 2026-01-24 23:13:30,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 18:13:30] 2026-01-24 23:13:30,313 [wrapper] pilotpid: 3724552
[2026-01-24 18:13:30] 2026-01-24 23:13:30,315 [wrapper] Pilot exit status: 0
[2026-01-24 18:13:30] 2026-01-24 23:13:30,334 [wrapper] pandaids: 6978965813
[2026-01-24 18:13:30] 2026-01-24 23:13:30,429 [wrapper] cleanup supervisor_pilot 2283345 3724553
[2026-01-24 18:13:30] 2026-01-24 23:13:30,432 [wrapper] Test setup, not cleaning
[2026-01-24 18:13:30] 2026-01-24 23:13:30,436 [wrapper] apfmon messages muted
[2026-01-24 18:13:30] 2026-01-24 23:13:30,438 [wrapper] ==== wrapper stdout END ====
[2026-01-24 18:13:30] 2026-01-24 23:13:30,441 [wrapper] ==== wrapper stderr END ====
[2026-01-24 18:13:30]  *** Error codes and diagnostics ***
[2026-01-24 18:13:30]     "exeErrorCode": 0,
[2026-01-24 18:13:30]     "exeErrorDiag": "",
[2026-01-24 18:13:30]     "pilotErrorCode": 0,
[2026-01-24 18:13:30]     "pilotErrorDiag": "",
[2026-01-24 18:13:30]  *** Listing of results directory ***
[2026-01-24 18:13:30] total 642708
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas    584422 Jan 21 19:02 pilot3.tar.gz
[2026-01-24 18:13:30] -rwx------. 1 boincer umatlas     36322 Jan 21 19:43 runpilot2-wrapper.sh
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas      5111 Jan 21 19:46 queuedata.json
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas       100 Jan 22 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 18:13:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 22 00:04 run_atlas
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas       105 Jan 22 00:04 job.xml
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas 291123086 Jan 22 00:04 EVNT.48313433._000009.pool.root.1
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas    597777 Jan 22 00:04 input.tar.gz
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 00:04 start_atlas.sh
[2026-01-24 18:13:30] drwxrwx--x. 2 boincer umatlas      4096 Jan 22 00:04 shared
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas         0 Jan 22 00:04 boinc_lockfile
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas      2615 Jan 22 00:04 pandaJob.out
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas        57 Jan 22 00:04 setup.sh.local
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas   1002771 Jan 22 00:06 agis_schedconf.cvmfs.json
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas       433 Jan 22 00:07 workernode_map.json
[2026-01-24 18:13:30] drwx------. 5 boincer umatlas      4096 Jan 22 00:07 pilot3
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas      6660 Jan 24 18:10 init_data.xml
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas 320385814 Jan 24 18:11 HITS.48313436._000225.pool.root.1
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas       530 Jan 24 18:11 boinc_task_state.xml
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas      1057 Jan 24 18:12 memory_monitor_summary.json
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas   1516246 Jan 24 18:12 agis_ddmendpoints.agis.ALL.json
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas   2477050 Jan 24 18:12 log.48313436._000225.job.log.tgz.1
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas        96 Jan 24 18:12 pilot_heartbeat.json
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas      6392 Jan 24 18:12 heartbeat.json
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas      8192 Jan 24 18:13 boinc_mmap_file
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas        28 Jan 24 18:13 wrapper_checkpoint.txt
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas       823 Jan 24 18:13 pilotlog.txt
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas  18868676 Jan 24 18:13 log.48313436._000225.job.log.1
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas       357 Jan 24 18:13 output.list
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas       620 Jan 24 18:13 runtime_log
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas  21360640 Jan 24 18:13 result.tar.gz
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas      9333 Jan 24 18:13 runtime_log.err
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas       662 Jan 24 18:13 qQKMDmsyx28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSvsKDm9QgfSo.diag
[2026-01-24 18:13:30] -rw-r--r--. 1 boincer umatlas     21321 Jan 24 18:13 stderr.txt
[2026-01-24 18:13:30] HITS file was successfully produced:
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas 320385814 Jan 24 18:11 shared/HITS.pool.root.1
[2026-01-24 18:13:30]  *** Contents of shared directory: ***
[2026-01-24 18:13:30] total 618648
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas 291123086 Jan 22 00:04 ATLAS.root_0
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas    597777 Jan 22 00:04 input.tar.gz
[2026-01-24 18:13:30] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 00:04 start_atlas.sh
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas 320385814 Jan 24 18:11 HITS.pool.root.1
[2026-01-24 18:13:30] -rw-------. 1 boincer umatlas  21360640 Jan 24 18:13 result.tar.gz
18:13:32 (3704746): run_atlas exited; CPU time 99319.517072
18:13:32 (3704746): called boinc_finish(0)

</stderr_txt>
]]>

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