Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:49:03 (1628060): wrapper (7.7.26015): starting
13:49:03 (1628060): wrapper: running run_atlas (--nthreads 12)
[2026-01-22 13:49:03] Arguments: --nthreads 12
[2026-01-22 13:49:03] Threads: 12
[2026-01-22 13:49:03] Checking for CVMFS
[2026-01-22 13:49:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 13:49:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 13:49:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 13:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 13:49:05] 2.12.7.0 196394 1862 65168 155402 1 240 3445214 4194305 1124 130560 13 3032908 99.881 381598 293 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-22 13:49:05] CVMFS is ok
[2026-01-22 13:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 13:49:05] Checking for apptainer binary...
[2026-01-22 13:49:05] apptainer is not installed, using version from CVMFS
[2026-01-22 13:49:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 13:49:05] Trebeth
[2026-01-22 13:49:05] apptainer works
[2026-01-22 13:49:05] Set ATHENA_PROC_NUMBER=12
[2026-01-22 13:49:05] Set ATHENA_CORE_NUMBER=12
[2026-01-22 13:49:05] Starting ATLAS job with PandaID=6978965807
[2026-01-22 13:49:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 15:44:35]  *** The last 200 lines of the pilot log: ***
[2026-01-22 15:44:35] 2026-01-22 20:43:45,152 | INFO     | preparing for final server update for job 6978965807 in state='finished'
[2026-01-22 15:44:35] 2026-01-22 20:43:45,152 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6978965807/jobReport.json
[2026-01-22 15:44:35] 2026-01-22 20:43:45,154 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-22 15:44:35] 2026-01-22 20:43:45,155 | INFO     | this job has now completed (state=finished)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,155 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,155 | INFO     | log transfer has been attempted: DONE
[2026-01-22 15:44:35] 2026-01-22 20:43:45,155 | INFO     | job 6978965807 has finished - writing final server update
[2026-01-22 15:44:35] 2026-01-22 20:43:45,156 | INFO     | total number of processed events: 400 (read)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,185 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6978965807/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,185 | INFO     | extracted standard info from prmon json
[2026-01-22 15:44:35] 2026-01-22 20:43:45,185 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 15:44:35] 2026-01-22 20:43:45,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 15:44:35] 2026-01-22 20:43:45,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 15:44:35] 2026-01-22 20:43:45,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 15:44:35] 2026-01-22 20:43:45,188 | INFO     | fitting pss+swap vs Time
[2026-01-22 15:44:35] 2026-01-22 20:43:45,189 | INFO     | sum of square deviations: 447383272.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,189 | INFO     | sum of deviations: 15949807433.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,189 | INFO     | mean x: 1769111194.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,189 | INFO     | mean y: 2722374.920353982
[2026-01-22 15:44:35] 2026-01-22 20:43:45,189 | INFO     | intersect: -63068439731.16908
[2026-01-22 15:44:35] 2026-01-22 20:43:45,190 | INFO     | chi2: 3.2727731017531783
[2026-01-22 15:44:35] 2026-01-22 20:43:45,190 | INFO     | sum of square deviations: 390582207.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,190 | INFO     | sum of deviations: 23260317114.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,190 | INFO     | mean x: 1769111041.5
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | mean y: 2741251.185185185
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | intersect: -105353015098.38354
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | chi2: 2.5965970504846876
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | current chi2=2.5965970504846876 (change=20.66064558237394 %)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | right removable region: 107
[2026-01-22 15:44:35] 2026-01-22 20:43:45,191 | INFO     | sum of square deviations: 390582207.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,192 | INFO     | sum of deviations: -13105614265.5
[2026-01-22 15:44:35] 2026-01-22 20:43:45,192 | INFO     | mean x: 1769111346.5
[2026-01-22 15:44:35] 2026-01-22 20:43:45,192 | INFO     | mean y: 2799783.935185185
[2026-01-22 15:44:35] 2026-01-22 20:43:45,192 | INFO     | intersect: 59363647473.41612
[2026-01-22 15:44:35] 2026-01-22 20:43:45,193 | INFO     | chi2: 0.9200570279811032
[2026-01-22 15:44:35] 2026-01-22 20:43:45,193 | INFO     | current chi2=0.9200570279811032 (change=71.8875400348334 %)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,193 | INFO     | sum of square deviations: 338804492.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,193 | INFO     | sum of deviations: -19250011316.000004
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | mean x: 1769111499.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | mean y: 2817705.9708737866
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | intersect: 100519242898.51445
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | chi2: 0.7583245192315304
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | current chi2=0.7583245192315304 (change=17.578530876989788 %)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | left removable region: 20
[2026-01-22 15:44:35] 2026-01-22 20:43:45,194 | INFO     | sum of square deviations: 204163828.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | sum of deviations: -9193864856.000002
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | mean x: 1769111621.0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | mean y: 2837315.1839080458
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | intersect: 79669119623.78706
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | chi2: 0.036822599091574294
[2026-01-22 15:44:35] 2026-01-22 20:43:45,195 | INFO     | current memory leak: -45.03 B/s (using 87 data points, chi2=0.04)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | could have reported an average CPU frequency of 2793 MHz (7 samples)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | ..............................
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . Timing measurements:
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . get job = 0 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . initial setup = 5 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . payload setup = 4 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . stage-in = 0 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,196 | INFO     | . payload execution = 6843 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,197 | INFO     | . stage-out = 0 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,197 | INFO     | . log creation = 0 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,197 | INFO     | ..............................
[2026-01-22 15:44:35] 2026-01-22 20:43:45,419 | INFO     | 
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | job summary report
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | --------------------------------------------------
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | PanDA job id: 6978965807
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | task id: 48313436
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | errors: (none)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | pilot state: finished 
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | transexitcode: 0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | exeerrorcode: 0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | exeerrordiag: 
[2026-01-22 15:44:35] 2026-01-22 20:43:45,420 | INFO     | exitcode: 0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | exitmsg: OK
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | cpuconsumptiontime: 74549 s
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | nevents: 400
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | neventsw: 0
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | pid: 1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | pgrp: 1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | corecount: 12
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | event service: False
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | sizes: {0: 2283943, 1: 2284404, 11: 2284404, 6851: 2311645, 6852: 2320657, 6853: 2320713, 6855: 2321035}
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | --------------------------------------------------
[2026-01-22 15:44:35] 2026-01-22 20:43:45,421 | INFO     | 
[2026-01-22 15:44:35] 2026-01-22 20:43:45,422 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-22 15:44:35] 2026-01-22 20:43:45,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | job 6978965807 has completed (purged errors)
[2026-01-22 15:44:35] 2026-01-22 20:43:45,440 | INFO     | overall cleanup function is called
[2026-01-22 15:44:35] 2026-01-22 20:43:46,447 | INFO     | --- collectZombieJob: --- 10, [1637232]
[2026-01-22 15:44:35] 2026-01-22 20:43:46,448 | INFO     | zombie collector waiting for pid 1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:46,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 15:44:35] 2026-01-22 20:43:46,448 | INFO     | collected zombie processes
[2026-01-22 15:44:35] 2026-01-22 20:43:46,448 | INFO     | will attempt to kill all subprocesses of pid=1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:46,637 | INFO     | process IDs to be killed: [1637232] (in reverse order)
[2026-01-22 15:44:35] 2026-01-22 20:43:46,696 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 15:44:35] 2026-01-22 20:43:46,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 15:44:35] 2026-01-22 20:43:46,702 | INFO     | did not find any defunct processes belonging to 1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:46,707 | INFO     | did not find any defunct processes belonging to 1637232
[2026-01-22 15:44:35] 2026-01-22 20:43:46,707 | INFO     | ready for new job
[2026-01-22 15:44:35] 2026-01-22 20:43:46,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 15:44:35] 2026-01-22 20:43:46,710 | INFO     | **************************************
[2026-01-22 15:44:35] 2026-01-22 20:43:46,710 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 15:44:35] 2026-01-22 20:43:46,710 | INFO     | **************************************
[2026-01-22 15:44:35] 2026-01-22 20:43:46,710 | INFO     | 
[2026-01-22 15:44:35] 2026-01-22 20:43:46,730 | INFO     | architecture information:
[2026-01-22 15:44:35] 2026-01-22 20:43:46,731 | INFO     | executing command: cat /etc/os-release
[2026-01-22 15:44:35] 2026-01-22 20:43:46,747 | INFO     | cat /etc/os-release:
[2026-01-22 15:44:35] NAME="CentOS Linux"
[2026-01-22 15:44:35] VERSION="7 (Core)"
[2026-01-22 15:44:35] ID="centos"
[2026-01-22 15:44:35] ID_LIKE="rhel fedora"
[2026-01-22 15:44:35] VERSION_ID="7"
[2026-01-22 15:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 15:44:35] ANSI_COLOR="0;31"
[2026-01-22 15:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 15:44:35] HOME_URL="https://www.centos.org/"
[2026-01-22 15:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 15:44:35] 
[2026-01-22 15:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 15:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 15:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 15:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 15:44:35] 
[2026-01-22 15:44:35] 2026-01-22 20:43:46,747 | INFO     | **************************************
[2026-01-22 15:44:35] 2026-01-22 20:43:47,248 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-22 15:44:35] 2026-01-22 20:43:47,261 | INFO     | sufficient remaining disk space (383914082304 B)
[2026-01-22 15:44:35] 2026-01-22 20:43:47,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 15:44:35] 2026-01-22 20:43:47,261 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 15:44:35] 2026-01-22 20:43:47,261 | INFO     | update_server=False
[2026-01-22 15:44:35] 2026-01-22 20:43:47,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 15:44:35] 2026-01-22 20:43:47,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 15:44:35] 2026-01-22 20:43:47,391 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-22 15:44:35] 2026-01-22 20:43:47,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-22 15:44:35] 2026-01-22 20:43:47,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 15:44:35] 2026-01-22 20:43:47,391 | INFO     | will abort loop
[2026-01-22 15:44:35] 2026-01-22 20:43:47,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 15:44:35] 2026-01-22 20:43:47,883 | INFO     | all data control threads have been joined
[2026-01-22 15:44:35] 2026-01-22 20:43:48,187 | INFO     | all payload control threads have been joined
[2026-01-22 15:44:35] 2026-01-22 20:43:48,264 | INFO     | [job] retrieve thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,267 | INFO     | [job] queue monitor thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,363 | INFO     | [payload] validate_post thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,395 | INFO     | [job] job monitor thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,555 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,615 | INFO     | all job control threads have been joined
[2026-01-22 15:44:35] 2026-01-22 20:43:48,777 | INFO     | [data] copytool_in thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,887 | INFO     | [data] control thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:48,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 15:44:35] 2026-01-22 20:43:49,059 | INFO     | [payload] failed_post thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,191 | INFO     | [payload] control thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,383 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,545 | INFO     | [data] copytool_out thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,619 | INFO     | [job] control thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,691 | INFO     | [job] validate thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:49,755 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:52,899 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:43:58,123 | INFO     | job.realtimelogging is not enabled
[2026-01-22 15:44:35] 2026-01-22 20:43:59,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 15:44:35] 2026-01-22 20:44:18,258 | INFO     | PID=1632445 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 15:44:35] 2026-01-22 20:44:18,258 | INFO     | .. there are 3 such processes running
[2026-01-22 15:44:35] 2026-01-22 20:44:18,259 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 15:44:35] 2026-01-22 20:44:18,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 15:44:35] 2026-01-22 20:44:18,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 15:44:35] 2026-01-22 20:44:29,899 | INFO     | [monitor] cgroup control has ended
[2026-01-22 15:44:35] 2026-01-22 20:44:30,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379178125120)>', '<ExcThread(monitor, started 140378875336448)>']
[2026-01-22 15:44:35] 2026-01-22 20:44:31,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 15:44:35] 2026-01-22 20:44:31,312 | INFO     | [monitor] control thread has ended
[2026-01-22 15:44:35] 2026-01-22 20:44:35,419 | INFO     | all workflow threads have been joined
[2026-01-22 15:44:35] 2026-01-22 20:44:35,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 15:44:35] 2026-01-22 20:44:35,420 | INFO     | traces error code: 0
[2026-01-22 15:44:35] 2026-01-22 20:44:35,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 15:44:35] 2026-01-22 20:44:35,525 [wrapper] ==== pilot stdout END ====
[2026-01-22 15:44:35] 2026-01-22 20:44:35,527 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 15:44:35] 2026-01-22 20:44:35,528 [wrapper] pilotpid: 1632445
[2026-01-22 15:44:35] 2026-01-22 20:44:35,530 [wrapper] Pilot exit status: 0
[2026-01-22 15:44:35] 2026-01-22 20:44:35,537 [wrapper] pandaids: 6978965807
[2026-01-22 15:44:35] 2026-01-22 20:44:35,576 [wrapper] cleanup supervisor_pilot 1690410 1632446
[2026-01-22 15:44:35] 2026-01-22 20:44:35,577 [wrapper] Test setup, not cleaning
[2026-01-22 15:44:35] 2026-01-22 20:44:35,578 [wrapper] apfmon messages muted
[2026-01-22 15:44:35] 2026-01-22 20:44:35,580 [wrapper] ==== wrapper stdout END ====
[2026-01-22 15:44:35] 2026-01-22 20:44:35,581 [wrapper] ==== wrapper stderr END ====
[2026-01-22 15:44:35]  *** Error codes and diagnostics ***
[2026-01-22 15:44:35]     "exeErrorCode": 0,
[2026-01-22 15:44:35]     "exeErrorDiag": "",
[2026-01-22 15:44:35]     "pilotErrorCode": 0,
[2026-01-22 15:44:35]     "pilotErrorDiag": "",
[2026-01-22 15:44:35]  *** Listing of results directory ***
[2026-01-22 15:44:35] total 594024
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc    584422 Jan 21 19:02 pilot3.tar.gz
[2026-01-22 15:44:35] -rwx------ 1 boinc boinc     36322 Jan 21 19:43 runpilot2-wrapper.sh
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc      5111 Jan 21 19:46 queuedata.json
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc       100 Jan 22 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 15:44:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 13:49 run_atlas
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc       105 Jan 22 13:49 job.xml
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc      7579 Jan 22 13:49 init_data.xml
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc 291123086 Jan 22 13:49 EVNT.48313433._000009.pool.root.1
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc     15845 Jan 22 13:49 start_atlas.sh
[2026-01-22 15:44:35] drwxrwx--x 2 boinc boinc      4096 Jan 22 13:49 shared
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc    597769 Jan 22 13:49 input.tar.gz
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc         0 Jan 22 13:49 boinc_lockfile
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc      2615 Jan 22 13:49 pandaJob.out
[2026-01-22 15:44:35] -rw------- 1 boinc boinc        50 Jan 22 13:49 setup.sh.local
[2026-01-22 15:44:35] -rw------- 1 boinc boinc   1002389 Jan 22 13:49 agis_schedconf.cvmfs.json
[2026-01-22 15:44:35] -rw------- 1 boinc boinc   1516246 Jan 22 13:49 agis_ddmendpoints.agis.ALL.json
[2026-01-22 15:44:35] -rw------- 1 boinc boinc       429 Jan 22 13:49 workernode_map.json
[2026-01-22 15:44:35] drwx------ 5 boinc boinc      4096 Jan 22 13:49 pilot3
[2026-01-22 15:44:35] -rw------- 1 boinc boinc 310359551 Jan 22 15:43 HITS.48313436._000219.pool.root.1
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc       529 Jan 22 15:43 boinc_task_state.xml
[2026-01-22 15:44:35] -rw------- 1 boinc boinc      1030 Jan 22 15:43 memory_monitor_summary.json
[2026-01-22 15:44:35] -rw------- 1 boinc boinc    427862 Jan 22 15:43 log.48313436._000219.job.log.tgz.1
[2026-01-22 15:44:35] -rw------- 1 boinc boinc      6330 Jan 22 15:43 heartbeat.json
[2026-01-22 15:44:35] -rw------- 1 boinc boinc        95 Jan 22 15:44 pilot_heartbeat.json
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc      8192 Jan 22 15:44 boinc_mmap_file
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc        27 Jan 22 15:44 wrapper_checkpoint.txt
[2026-01-22 15:44:35] -rw------- 1 boinc boinc      5085 Jan 22 15:44 pilotlog.txt
[2026-01-22 15:44:35] -rw------- 1 boinc boinc   1002128 Jan 22 15:44 log.48313436._000219.job.log.1
[2026-01-22 15:44:35] -rw------- 1 boinc boinc       357 Jan 22 15:44 output.list
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc       620 Jan 22 15:44 runtime_log
[2026-01-22 15:44:35] -rw------- 1 boinc boinc   1443840 Jan 22 15:44 result.tar.gz
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc      9403 Jan 22 15:44 runtime_log.err
[2026-01-22 15:44:35] -rw------- 1 boinc boinc       651 Jan 22 15:44 5i9LDmsyx28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMvsKDmwzOuOo.diag
[2026-01-22 15:44:35] -rw-r--r-- 1 boinc boinc     20984 Jan 22 15:44 stderr.txt
[2026-01-22 15:44:35] HITS file was successfully produced:
[2026-01-22 15:44:35] -rw------- 1 boinc boinc 310359551 Jan 22 15:43 shared/HITS.pool.root.1
[2026-01-22 15:44:35]  *** Contents of shared directory: ***
[2026-01-22 15:44:35] total 589408
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc 291123086 Jan 22 13:49 ATLAS.root_0
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc     15845 Jan 22 13:49 start_atlas.sh
[2026-01-22 15:44:35] -rw-r--r-- 2 boinc boinc    597769 Jan 22 13:49 input.tar.gz
[2026-01-22 15:44:35] -rw------- 1 boinc boinc 310359551 Jan 22 15:43 HITS.pool.root.1
[2026-01-22 15:44:35] -rw------- 1 boinc boinc   1443840 Jan 22 15:44 result.tar.gz
15:44:36 (1628060): run_atlas exited; CPU time 74689.656953
15:44:36 (1628060): called boinc_finish(0)

</stderr_txt>
]]>

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