Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:54:12 (3423989): wrapper (7.7.26015): starting
05:54:12 (3423989): wrapper: running run_atlas (--nthreads 12)
[2026-01-22 05:54:12] Arguments: --nthreads 12
[2026-01-22 05:54:12] Threads: 12
[2026-01-22 05:54:12] Checking for CVMFS
[2026-01-22 05:54:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 05:54:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 05:54:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 05:54:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 05:54:13] 2.11.0.0 1720695 417 60404 155392 3 188 5269655 6144001 11999 130560 0 4249599 100.000 61 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-22 05:54:13] CVMFS is ok
[2026-01-22 05:54:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 05:54:13] Checking for apptainer binary...
[2026-01-22 05:54:13] apptainer is not installed, using version from CVMFS
[2026-01-22 05:54:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 05:54:13] radiat0r
[2026-01-22 05:54:13] apptainer works
[2026-01-22 05:54:13] Set ATHENA_PROC_NUMBER=12
[2026-01-22 05:54:13] Set ATHENA_CORE_NUMBER=12
[2026-01-22 05:54:13] Starting ATLAS job with PandaID=6977332234
[2026-01-22 05:54:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 06:57:48]  *** The last 200 lines of the pilot log: ***
[2026-01-22 06:57:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 06:57:48]  is_altstaged=None
[2026-01-22 06:57:48]  is_tar=False
[2026-01-22 06:57:48]  lfn=log.48299685._000122.job.log.tgz.1
[2026-01-22 06:57:48]  mtime=0
[2026-01-22 06:57:48]  protocol_id=None
[2026-01-22 06:57:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 06:57:48]  replicas=None
[2026-01-22 06:57:48]  scope=mc23_13p6TeV
[2026-01-22 06:57:48]  status=None
[2026-01-22 06:57:48]  status_code=0
[2026-01-22 06:57:48]  storage_token=
[2026-01-22 06:57:48]  surl=/var/lib/boinc/slots/23/PanDA_Pilot-6977332234/log.48299685._000122.job.log.tgz.1
[2026-01-22 06:57:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/c5/log.48299685._000122.job.log.tgz.1
[2026-01-22 06:57:48]  workdir=None
[2026-01-22 06:57:48] ]
[2026-01-22 06:57:48] 2026-01-22 06:57:11,937 | INFO     | transferring file log.48299685._000122.job.log.tgz.1 from /var/lib/boinc/slots/23/PanDA_Pilot-6977332234/log.48299685._000122.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-22 06:57:48] 2026-01-22 06:57:11,937 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/23/PanDA_Pilot-6977332234/log.48299685._000122.job.log.tgz.1 /var/lib/boinc/slots/23/log.48299685._000122.j
[2026-01-22 06:57:48] 2026-01-22 06:57:11,964 | INFO     | adding to output.list: log.48299685._000122.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/c5/log.48299685._000122.job.log.tg
[2026-01-22 06:57:48] 2026-01-22 06:57:11,965 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 06:57:48] 2026-01-22 06:57:11,965 | INFO     | summary of transferred files:
[2026-01-22 06:57:48] 2026-01-22 06:57:11,965 | INFO     |  -- lfn=log.48299685._000122.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 06:57:48] 2026-01-22 06:57:11,966 | INFO     | stage-out finished correctly
[2026-01-22 06:57:48] 2026-01-22 06:57:12,196 | INFO     | time since job start (3756s) is within the limit (349056.0s)
[2026-01-22 06:57:48] 2026-01-22 06:57:13,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 06:57:48] 2026-01-22 06:57:13,794 | WARNING  | process 3434434 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 06:57:48] 2026-01-22 06:57:13,794 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6977332234/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 06:57:48] 2026-01-22 06:57:14,200 | INFO     | time since job start (3758s) is within the limit (349056.0s)
[2026-01-22 06:57:48] 2026-01-22 06:57:14,438 | INFO     | number of running child processes to parent process 3434434: 1
[2026-01-22 06:57:48] 2026-01-22 06:57:14,439 | INFO     | maximum number of monitored processes: 6
[2026-01-22 06:57:48] 2026-01-22 06:57:15,604 | INFO     | job 6977332234 has state=finished
[2026-01-22 06:57:48] 2026-01-22 06:57:15,604 | INFO     | preparing for final server update for job 6977332234 in state='finished'
[2026-01-22 06:57:48] 2026-01-22 06:57:15,605 | INFO     | reading metadata from: /var/lib/boinc/slots/23/PanDA_Pilot-6977332234/jobReport.json
[2026-01-22 06:57:48] 2026-01-22 06:57:15,608 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/23/workernode_map.json
[2026-01-22 06:57:48] 2026-01-22 06:57:15,608 | INFO     | this job has now completed (state=finished)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,608 | INFO     | log transfer has been attempted: DONE
[2026-01-22 06:57:48] 2026-01-22 06:57:15,608 | INFO     | job 6977332234 has finished - writing final server update
[2026-01-22 06:57:48] 2026-01-22 06:57:15,609 | INFO     | total number of processed events: 400 (read)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,683 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6977332234/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,683 | INFO     | extracted standard info from prmon json
[2026-01-22 06:57:48] 2026-01-22 06:57:15,684 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 06:57:48] 2026-01-22 06:57:15,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 06:57:48] 2026-01-22 06:57:15,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 06:57:48] 2026-01-22 06:57:15,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 06:57:48] 2026-01-22 06:57:15,686 | INFO     | fitting pss+swap vs Time
[2026-01-22 06:57:48] 2026-01-22 06:57:15,686 | INFO     | sum of square deviations: 51573060.0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,686 | INFO     | sum of deviations: 1072428128.9999999
[2026-01-22 06:57:48] 2026-01-22 06:57:15,686 | INFO     | mean x: 1769063254.0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,687 | INFO     | mean y: 2689316.3636363638
[2026-01-22 06:57:48] 2026-01-22 06:57:15,687 | INFO     | intersect: -36783826658.640976
[2026-01-22 06:57:48] 2026-01-22 06:57:15,687 | INFO     | chi2: 0.002569120344999011
[2026-01-22 06:57:48] 2026-01-22 06:57:15,687 | INFO     | current memory leak: 20.79 B/s (using 55 data points, chi2=0.00)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,687 | INFO     | could have reported an average CPU frequency of 2432 MHz (6 samples)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | ..............................
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . Timing measurements:
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . get job = 0 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . initial setup = 7 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . payload setup = 7 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . stage-in = 0 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . payload execution = 3731 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . stage-out = 0 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | . log creation = 0 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,688 | INFO     | ..............................
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | 
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | job summary report
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | --------------------------------------------------
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | PanDA job id: 6977332234
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | task id: 48299685
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | errors: (none)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | pilot state: finished 
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | transexitcode: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | exeerrorcode: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | exeerrordiag: 
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | exitcode: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | exitmsg: OK
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | cpuconsumptiontime: 39636 s
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | nevents: 400
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | neventsw: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | pid: 3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | pgrp: 3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | corecount: 12
[2026-01-22 06:57:48] 2026-01-22 06:57:15,901 | INFO     | event service: False
[2026-01-22 06:57:48] 2026-01-22 06:57:15,902 | INFO     | sizes: {0: 2284136, 1: 2284426, 11: 2284426, 3743: 2310429, 3745: 2319429, 3746: 2319485, 3748: 2319807}
[2026-01-22 06:57:48] 2026-01-22 06:57:15,902 | INFO     | --------------------------------------------------
[2026-01-22 06:57:48] 2026-01-22 06:57:15,902 | INFO     | 
[2026-01-22 06:57:48] 2026-01-22 06:57:15,902 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2026-01-22 06:57:48] 2026-01-22 06:57:15,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | job 6977332234 has completed (purged errors)
[2026-01-22 06:57:48] 2026-01-22 06:57:15,940 | INFO     | overall cleanup function is called
[2026-01-22 06:57:48] 2026-01-22 06:57:16,951 | INFO     | --- collectZombieJob: --- 10, [3434434]
[2026-01-22 06:57:48] 2026-01-22 06:57:16,951 | INFO     | zombie collector waiting for pid 3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:16,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 06:57:48] 2026-01-22 06:57:16,952 | INFO     | collected zombie processes
[2026-01-22 06:57:48] 2026-01-22 06:57:16,952 | INFO     | will attempt to kill all subprocesses of pid=3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:17,693 | INFO     | process IDs to be killed: [3434434] (in reverse order)
[2026-01-22 06:57:48] 2026-01-22 06:57:17,910 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 06:57:48] 2026-01-22 06:57:17,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 06:57:48] 2026-01-22 06:57:17,937 | INFO     | did not find any defunct processes belonging to 3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:17,960 | INFO     | did not find any defunct processes belonging to 3434434
[2026-01-22 06:57:48] 2026-01-22 06:57:17,960 | INFO     | ready for new job
[2026-01-22 06:57:48] 2026-01-22 06:57:17,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 06:57:48] 2026-01-22 06:57:17,962 | INFO     | **************************************
[2026-01-22 06:57:48] 2026-01-22 06:57:17,963 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 06:57:48] 2026-01-22 06:57:17,963 | INFO     | **************************************
[2026-01-22 06:57:48] 2026-01-22 06:57:17,963 | INFO     | 
[2026-01-22 06:57:48] 2026-01-22 06:57:17,997 | INFO     | architecture information:
[2026-01-22 06:57:48] 2026-01-22 06:57:17,998 | INFO     | executing command: cat /etc/os-release
[2026-01-22 06:57:48] 2026-01-22 06:57:18,021 | INFO     | cat /etc/os-release:
[2026-01-22 06:57:48] NAME="CentOS Linux"
[2026-01-22 06:57:48] VERSION="7 (Core)"
[2026-01-22 06:57:48] ID="centos"
[2026-01-22 06:57:48] ID_LIKE="rhel fedora"
[2026-01-22 06:57:48] VERSION_ID="7"
[2026-01-22 06:57:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 06:57:48] ANSI_COLOR="0;31"
[2026-01-22 06:57:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 06:57:48] HOME_URL="https://www.centos.org/"
[2026-01-22 06:57:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 06:57:48] 
[2026-01-22 06:57:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 06:57:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 06:57:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 06:57:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 06:57:48] 
[2026-01-22 06:57:48] 2026-01-22 06:57:18,021 | INFO     | **************************************
[2026-01-22 06:57:48] 2026-01-22 06:57:18,524 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2026-01-22 06:57:48] 2026-01-22 06:57:18,552 | INFO     | sufficient remaining disk space (1708248793088 B)
[2026-01-22 06:57:48] 2026-01-22 06:57:18,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 06:57:48] 2026-01-22 06:57:18,553 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 06:57:48] 2026-01-22 06:57:18,553 | INFO     | update_server=False
[2026-01-22 06:57:48] 2026-01-22 06:57:18,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 06:57:48] 2026-01-22 06:57:18,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 06:57:48] 2026-01-22 06:57:18,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 06:57:48] 2026-01-22 06:57:18,554 | INFO     | aborting loop
[2026-01-22 06:57:48] 2026-01-22 06:57:18,781 | INFO     | all data control threads have been joined
[2026-01-22 06:57:48] 2026-01-22 06:57:18,874 | INFO     | all payload control threads have been joined
[2026-01-22 06:57:48] 2026-01-22 06:57:19,556 | INFO     | [job] retrieve thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,560 | INFO     | [job] job monitor thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,740 | INFO     | [payload] validate_post thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 06:57:48] 2026-01-22 06:57:19,787 | INFO     | [data] control thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,880 | INFO     | [payload] control thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,929 | INFO     | [job] validate thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:19,974 | INFO     | all job control threads have been joined
[2026-01-22 06:57:48] 2026-01-22 06:57:20,106 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,321 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,556 | INFO     | [data] copytool_out thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,581 | INFO     | [payload] failed_post thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,650 | INFO     | [data] copytool_in thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,650 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:20,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 06:57:48] 2026-01-22 06:57:20,980 | INFO     | [job] control thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:21,798 | INFO     | [job] queue monitor thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:23,779 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:29,434 | INFO     | job.realtimelogging is not enabled
[2026-01-22 06:57:48] 2026-01-22 06:57:30,440 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 06:57:48] 2026-01-22 06:57:41,588 | INFO     | [monitor] cgroup control has ended
[2026-01-22 06:57:48] 2026-01-22 06:57:41,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054694065984)>', '<ExcThread(monitor, started 140053976180480)>']
[2026-01-22 06:57:48] 2026-01-22 06:57:47,018 | INFO     | all workflow threads have been joined
[2026-01-22 06:57:48] 2026-01-22 06:57:47,018 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 06:57:48] 2026-01-22 06:57:47,018 | INFO     | traces error code: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:47,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 06:57:48] 2026-01-22 06:57:48,206 | INFO     | PID=3428874 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-22 06:57:48] 2026-01-22 06:57:48,206 | INFO     | .. there are 13 such processes running
[2026-01-22 06:57:48] 2026-01-22 06:57:48,207 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 06:57:48] 2026-01-22 06:57:48,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 06:57:48] 2026-01-22 06:57:48,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 06:57:48] 2026-01-22 06:57:48,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 06:57:48] 2026-01-22 06:57:48,207 | INFO     | [monitor] control thread has ended
[2026-01-22 06:57:48] 2026-01-22 06:57:48,358 [wrapper] ==== pilot stdout END ====
[2026-01-22 06:57:48] 2026-01-22 06:57:48,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 06:57:48] 2026-01-22 06:57:48,365 [wrapper] pilotpid: 3428874
[2026-01-22 06:57:48] 2026-01-22 06:57:48,369 [wrapper] Pilot exit status: 0
[2026-01-22 06:57:48] 2026-01-22 06:57:48,383 [wrapper] pandaids: 6977332234
[2026-01-22 06:57:48] 2026-01-22 06:57:48,556 [wrapper] cleanup supervisor_pilot 3634649 3428875
[2026-01-22 06:57:48] 2026-01-22 06:57:48,560 [wrapper] Test setup, not cleaning
[2026-01-22 06:57:48] 2026-01-22 06:57:48,563 [wrapper] apfmon messages muted
[2026-01-22 06:57:48] 2026-01-22 06:57:48,567 [wrapper] ==== wrapper stdout END ====
[2026-01-22 06:57:48] 2026-01-22 06:57:48,570 [wrapper] ==== wrapper stderr END ====
[2026-01-22 06:57:48]  *** Error codes and diagnostics ***
[2026-01-22 06:57:48]     "exeErrorCode": 0,
[2026-01-22 06:57:48]     "exeErrorDiag": "",
[2026-01-22 06:57:48]     "pilotErrorCode": 0,
[2026-01-22 06:57:48]     "pilotErrorDiag": "",
[2026-01-22 06:57:48]  *** Listing of results directory ***
[2026-01-22 06:57:48] total 408748
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc      5111 Jan 21 10:08 queuedata.json
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc    584422 Jan 21 10:08 pilot3.tar.gz
[2026-01-22 06:57:48] -rwx------ 1 boinc boinc     36322 Jan 21 10:08 runpilot2-wrapper.sh
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc       100 Jan 22 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 06:57:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 05:54 run_atlas
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc       105 Jan 22 05:54 job.xml
[2026-01-22 06:57:48] drwxrwx--x 2 boinc boinc      4096 Jan 22 05:54 shared
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc    597788 Jan 22 05:54 input.tar.gz
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc 248842173 Jan 22 05:54 EVNT.48299683._000005.pool.root.1
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc     15845 Jan 22 05:54 start_atlas.sh
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc      9416 Jan 22 05:54 init_data.xml
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc         0 Jan 22 05:54 boinc_setup_complete
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc         0 Jan 22 05:54 boinc_lockfile
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc      2643 Jan 22 05:54 pandaJob.out
[2026-01-22 06:57:48] -rw------- 1 boinc boinc   1002771 Jan 22 05:54 agis_schedconf.cvmfs.json
[2026-01-22 06:57:48] -rw------- 1 boinc boinc   1516246 Jan 22 05:54 agis_ddmendpoints.agis.ALL.json
[2026-01-22 06:57:48] -rw------- 1 boinc boinc       421 Jan 22 05:54 workernode_map.json
[2026-01-22 06:57:48] drwx------ 5 boinc boinc      4096 Jan 22 05:54 pilot3
[2026-01-22 06:57:48] -rw------- 1 boinc boinc 163906757 Jan 22 06:56 HITS.48299685._000122.pool.root.1
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc       529 Jan 22 06:56 boinc_task_state.xml
[2026-01-22 06:57:48] -rw------- 1 boinc boinc      1043 Jan 22 06:57 memory_monitor_summary.json
[2026-01-22 06:57:48] -rw------- 1 boinc boinc    384530 Jan 22 06:57 log.48299685._000122.job.log.tgz.1
[2026-01-22 06:57:48] -rw------- 1 boinc boinc      6286 Jan 22 06:57 heartbeat.json
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc      8192 Jan 22 06:57 boinc_mmap_file
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc        27 Jan 22 06:57 wrapper_checkpoint.txt
[2026-01-22 06:57:48] -rw------- 1 boinc boinc       824 Jan 22 06:57 pilotlog.txt
[2026-01-22 06:57:48] -rw------- 1 boinc boinc        95 Jan 22 06:57 pilot_heartbeat.json
[2026-01-22 06:57:48] -rw------- 1 boinc boinc    550207 Jan 22 06:57 log.48299685._000122.job.log.1
[2026-01-22 06:57:48] -rw------- 1 boinc boinc       357 Jan 22 06:57 output.list
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc       620 Jan 22 06:57 runtime_log
[2026-01-22 06:57:48] -rw------- 1 boinc boinc    952320 Jan 22 06:57 result.tar.gz
[2026-01-22 06:57:48] -rw------- 1 boinc boinc       642 Jan 22 06:57 THrLDmUJk28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAlrKDmJoYbvn.diag
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc      8787 Jan 22 06:57 runtime_log.err
[2026-01-22 06:57:48] -rw-r--r-- 1 boinc boinc     21156 Jan 22 06:57 stderr.txt
[2026-01-22 06:57:48] HITS file was successfully produced:
[2026-01-22 06:57:48] -rw------- 1 boinc boinc 163906757 Jan 22 06:56 shared/HITS.pool.root.1
[2026-01-22 06:57:48]  *** Contents of shared directory: ***
[2026-01-22 06:57:48] total 404620
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc    597788 Jan 22 05:54 input.tar.gz
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc 248842173 Jan 22 05:54 ATLAS.root_0
[2026-01-22 06:57:48] -rw-r--r-- 2 boinc boinc     15845 Jan 22 05:54 start_atlas.sh
[2026-01-22 06:57:48] -rw------- 1 boinc boinc 163906757 Jan 22 06:56 HITS.pool.root.1
[2026-01-22 06:57:48] -rw------- 1 boinc boinc    952320 Jan 22 06:57 result.tar.gz
06:57:50 (3423989): run_atlas exited; CPU time 39864.486620
06:57:50 (3423989): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN