Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-25 09:35:17 (22864): vboxwrapper version 26210
2026-01-25 09:35:17 (22864): BOINC client version: 7.16.5
2026-01-25 09:35:17 (22864): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-01-25 09:35:18 (22864): Successfully copied 'init_data.xml' to the shared directory.
2026-01-25 09:35:18 (22864): Create VM. (boinc_69a6627141f3aaba, slot#5)
2026-01-25 09:35:18 (22864): Setting Memory Size for VM. (4400MB)
2026-01-25 09:35:19 (22864): Setting CPU Count for VM. (4)
2026-01-25 09:35:19 (22864): Setting Chipset Options for VM.
2026-01-25 09:35:19 (22864): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-25 09:35:19 (22864): Setting Boot Options for VM.
2026-01-25 09:35:20 (22864): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-25 09:35:20 (22864): Enabling VM Network Access.
2026-01-25 09:35:20 (22864): Disabling USB Support for VM.
2026-01-25 09:35:21 (22864): Disabling COM Port Support for VM.
2026-01-25 09:35:21 (22864): Disabling LPT Port Support for VM.
2026-01-25 09:35:21 (22864): Disabling Audio Support for VM.
2026-01-25 09:35:22 (22864): Disabling Clipboard Support for VM.
2026-01-25 09:35:22 (22864): Disabling Drag and Drop Support for VM.
2026-01-25 09:35:22 (22864): Adding storage controller(s) to VM.
2026-01-25 09:35:22 (22864): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-25 09:35:23 (22864): Adding VirtualBox Guest Additions to VM.
2026-01-25 09:35:23 (22864): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-25 09:35:23 (22864): forwarding host port 59711 to guest port 80
2026-01-25 09:35:24 (22864): Enabling remote desktop for VM.
2026-01-25 09:35:24 (22864): Enabling shared directory for VM.
2026-01-25 09:35:25 (22864): Starting VM using VBoxManage interface. (boinc_69a6627141f3aaba, slot#5)
2026-01-25 09:35:29 (22864): Successfully started VM. (PID = '7652')
2026-01-25 09:35:29 (22864): Reporting VM Process ID to BOINC.
2026-01-25 09:35:29 (22864): Guest Log: BIOS: VirtualBox 5.2.44
2026-01-25 09:35:29 (22864): Guest Log: CPUID EDX: 0x178bfbff
2026-01-25 09:35:29 (22864): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-25 09:35:29 (22864): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-25 09:35:29 (22864): Detected: Web Application Enabled (http://localhost:59711)
2026-01-25 09:35:29 (22864): Detected: Remote Desktop Enabled (localhost:59712)
2026-01-25 09:35:29 (22864): Preference change detected
2026-01-25 09:35:29 (22864): Setting CPU throttle for VM. (100%)
2026-01-25 09:35:29 (22864): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-25 09:35:31 (22864): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-25 09:35:31 (22864): Guest Log: BIOS: Booting from Hard Disk...
2026-01-25 09:35:34 (22864): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-25 09:35:34 (22864): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-25 09:35:34 (22864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-25 09:35:39 (22864): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-25 09:35:39 (22864): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-25 09:35:45 (22864): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000167 main     Log opened 2026-01-25T09:35:43.798611000Z
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000275 main     OS Product: Linux
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000368 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000401 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000402 main     Process ID: 1304
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.000403 main     Package type: LINUX_64BITS_GENERIC
2026-01-25 09:35:45 (22864): Guest Log: 00:00:00.002330 main     5.2.32 r132073 started. Verbose level = 0
2026-01-25 09:35:45 (22864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-25 09:35:45 (22864): Guest Log: [INFO] Mounting shared directory
2026-01-25 09:35:45 (22864): Guest Log: [INFO] Checking for init_data.xml
2026-01-25 09:35:50 (22864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-25 09:35:50 (22864): Guest Log: [INFO] Detected branch: prod
2026-01-25 09:35:50 (22864): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-25 09:35:50 (22864): Guest Log: Copying input files
2026-01-25 09:35:53 (22864): Guest Log: Copied input files into RunAtlas.
2026-01-25 09:35:53 (22864): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-25 09:35:53 (22864): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-25 09:35:53 (22864): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-25 09:35:53 (22864): Guest Log: Further information can be found at the LHC@home message board.
2026-01-25 09:35:55 (22864): Guest Log: 00:00:10.009773 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 764 814 000ns (GuestNow=1 769 326 555 038 181 000 ns GuestLast=1 769 333 743 802 995 000 ns fSetTimeLastLoop=true )
2026-01-25 09:36:02 (22864): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-25 09:36:02 (22864): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-25 09:36:02 (22864): Guest Log: 2.6.3.0 1581 0 32040 155501 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-25 09:36:03 (22864): Guest Log: copied the webapp to /var/www
2026-01-25 09:36:03 (22864): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-25 09:36:03 (22864): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-25 09:36:03 (22864): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-25 09:36:03 (22864): Guest Log:  *** Starting ATLAS job. (PandaID=6976468390 taskID=47961985) ***
2026-01-25 11:15:32 (22864): Status Report: Elapsed Time: '6000.000000'
2026-01-25 11:15:32 (22864): Status Report: CPU Time: '18555.625000'
2026-01-25 12:55:35 (22864): Status Report: Elapsed Time: '12000.000000'
2026-01-25 12:55:35 (22864): Status Report: CPU Time: '41617.078125'
2026-01-25 14:35:39 (22864): Status Report: Elapsed Time: '18000.000000'
2026-01-25 14:35:39 (22864): Status Report: CPU Time: '65205.250000'
2026-01-25 16:15:43 (22864): Status Report: Elapsed Time: '24000.000000'
2026-01-25 16:15:43 (22864): Status Report: CPU Time: '88651.703125'
2026-01-25 17:55:49 (22864): Status Report: Elapsed Time: '30000.000000'
2026-01-25 17:55:49 (22864): Status Report: CPU Time: '111965.828125'
2026-01-25 19:35:54 (22864): Status Report: Elapsed Time: '36000.000000'
2026-01-25 19:35:54 (22864): Status Report: CPU Time: '135334.828125'
2026-01-25 20:12:43 (22864): Guest Log:  *** Job finished ***
2026-01-25 20:12:43 (22864): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:31,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:31,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:33,312 | INFO     | [monitor] cgroup control has ended
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:34,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110185338688)>', '<ExcThread(monitor, started 140109609428736)>']
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:34,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:34,991 | INFO     | [monitor] control thread has ended
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,697 | INFO     | all workflow threads have been joined
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,697 | INFO     | end of generic workflow (traces error code: 0)
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,698 | INFO     | traces error code: 0
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,819 [wrapper] ==== pilot stdout END ====
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,824 [wrapper] ==== wrapper stdout RESUME ====
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,832 [wrapper] pilotpid: 5971
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,838 [wrapper] Pilot exit status: 0
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,857 [wrapper] pandaids: 6976468390
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,893 [wrapper] cleanup supervisor_pilot  5419 5972
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,900 [wrapper] Test setup, not cleaning
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,906 [wrapper] apfmon messages muted
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,913 [wrapper] ==== wrapper stdout END ====
2026-01-25 20:12:43 (22864): Guest Log: 2026-01-25 18:12:39,919 [wrapper] ==== wrapper stderr END ====
2026-01-25 20:12:43 (22864): Guest Log:  *** Error codes and diagnostics ***
2026-01-25 20:12:43 (22864): Guest Log:     "exeErrorCode": 0,
2026-01-25 20:12:43 (22864): Guest Log:     "exeErrorDiag": "",
2026-01-25 20:12:43 (22864): Guest Log:     "pilotErrorCode": 0,
2026-01-25 20:12:43 (22864): Guest Log:     "pilotErrorDiag": "",
2026-01-25 20:12:43 (22864): Guest Log:  *** Listing of results directory ***
2026-01-25 20:12:43 (22864): Guest Log: total 362676
2026-01-25 20:12:43 (22864): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 20 14:43 pilot3.tar.gz
2026-01-25 20:12:43 (22864): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 20 14:54 queuedata.json
2026-01-25 20:12:43 (22864): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 20 14:54 runpilot2-wrapper.sh
2026-01-25 20:12:43 (22864): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 Jan 25 07:35 init_data.xml
2026-01-25 20:12:43 (22864): Guest Log: -rwxr-xr-x. 1 atlas atlas    597958 Jan 25 07:35 input.tar.gz
2026-01-25 20:12:43 (22864): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 25 07:35 start_atlas.sh
2026-01-25 20:12:43 (22864): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 25 07:35 EVNT.47961981._000026.pool.root.1 -> /data/./ATLAS.root_0
2026-01-25 20:12:43 (22864): Guest Log: -rw-r--r--. 1 atlas atlas      2875 Jan 25 07:36 pandaJob.out
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 25 07:36 agis_schedconf.cvmfs.json
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas       428 Jan 25 07:36 workernode_map.json
2026-01-25 20:12:43 (22864): Guest Log: drwx------. 5 atlas atlas      4096 Jan 25 07:36 pilot3
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas 354291935 Jan 25 18:11 HITS.47961985._000764.pool.root.1
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas      1037 Jan 25 18:11 memory_monitor_summary.json
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 25 18:11 agis_ddmendpoints.agis.ALL.json
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas   1291942 Jan 25 18:11 log.47961985._000764.job.log.tgz.1
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas      6974 Jan 25 18:12 heartbeat.json
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas        95 Jan 25 18:12 pilot_heartbeat.json
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 25 18:12 pilotlog.txt
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas   5314136 Jan 25 18:12 log.47961985._000764.job.log.1
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas       353 Jan 25 18:12 output.list
2026-01-25 20:12:43 (22864): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 25 18:12 runtime_log
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas   6625280 Jan 25 18:12 result.tar.gz
2026-01-25 20:12:43 (22864): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Jan 25 18:12 runtime_log.err
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas       674 Jan 25 18:12 CAmNDmHJS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLTvKDmkEo9Ho.diag
2026-01-25 20:12:43 (22864): Guest Log: Looking for outputfile HITS.47961985._000764.pool.root.1
2026-01-25 20:12:43 (22864): Guest Log: HITS file was successfully produced
2026-01-25 20:12:43 (22864): Guest Log: -rw-------. 1 atlas atlas 354291935 Jan 25 18:11 /home/atlas/RunAtlas/HITS.47961985._000764.pool.root.1
2026-01-25 20:12:45 (22864): Guest Log: Successfully finished the ATLAS job!
2026-01-25 20:12:45 (22864): Guest Log: Copying the results back to the shared directory!
2026-01-25 20:12:45 (22864): Guest Log:  *** Contents of shared directory: ***
2026-01-25 20:12:45 (22864): Guest Log: total 759740
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root 416420645 Jan 25 07:35 ATLAS.root_0
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root 354291935 Jan 25 18:12 HITS.pool.root.1
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root      8897 Jan 25 07:35 init_data.xml
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root    597958 Jan 22 04:23 input.tar.gz
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root   6625280 Jan 25 18:12 result.tar.gz
2026-01-25 20:12:45 (22864): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 22 04:23 start_atlas.sh
2026-01-25 20:12:45 (22864): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-25 20:12:45 (22864): VM Completion File Detected.
2026-01-25 20:12:45 (22864): Powering off VM.
2026-01-25 20:12:46 (22864): Successfully stopped VM.
2026-01-25 20:12:46 (22864): Deregistering VM. (boinc_69a6627141f3aaba, slot#5)
2026-01-25 20:12:46 (22864): Removing network bandwidth throttle group from VM.
2026-01-25 20:12:46 (22864): Removing VM from VirtualBox.
2026-01-25 20:12:51 (22864): called boinc_finish(0)

</stderr_txt>
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