Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
08:51:43 (4173395): wrapper (7.7.26015): starting
08:51:43 (4173395): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 08:51:43] Arguments: --nthreads 4
[2026-01-23 08:51:43] Threads: 4
[2026-01-23 08:51:43] Checking for CVMFS
[2026-01-23 08:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:51:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:51:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:51:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:51:43] 2.13.3.0 80730 4772 45664 155425 0 50 19188584 33554432 0 130560 0 2197905 99.989 132386 192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-23 08:51:43] CVMFS is ok
[2026-01-23 08:51:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:51:43] Checking for apptainer binary...
[2026-01-23 08:51:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:51:43] Running /usr/bin/apptainer --version
[2026-01-23 08:51:43] apptainer version 1.4.5
[2026-01-23 08:51:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:51:43] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-23 08:51:43] apptainer works
[2026-01-23 08:51:43] Set ATHENA_PROC_NUMBER=4
[2026-01-23 08:51:43] Set ATHENA_CORE_NUMBER=4
[2026-01-23 08:51:43] Starting ATLAS job with PandaID=6978100346
[2026-01-23 08:51:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 10:38:07]  *** The last 200 lines of the pilot log: ***
[2026-01-23 10:38:07] 2026-01-23 08:37:07,025 | INFO     | extracted standard info from prmon json
[2026-01-23 10:38:07] 2026-01-23 08:37:07,025 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 10:38:07] 2026-01-23 08:37:07,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 10:38:07] 2026-01-23 08:37:07,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 10:38:07] 2026-01-23 08:37:07,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | fitting pss+swap vs Time
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | sum of square deviations: 348769330.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | sum of deviations: -2640491322.9999986
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | mean x: 1769154268.5
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | mean y: 2423703.3846153845
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | intersect: 13396481303.067074
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | chi2: 2.1261634728703633
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | sum of square deviations: 300842850.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | sum of deviations: 3520222099.000002
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | mean x: 1769154116.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | mean y: 2442552.737373737
[2026-01-23 10:38:07] 2026-01-23 08:37:07,026 | INFO     | intersect: -20698782075.60268
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | chi2: 1.4945294005252117
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | current chi2=1.4945294005252117 (change=29.707690890410838 %)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | sum of square deviations: 257521107.5
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | sum of deviations: 3474515469.999999
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | mean x: 1769153963.5
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | mean y: 2442391.7021276597
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | intersect: -23867262405.185497
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | chi2: 1.4975867928893167
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | current chi2=1.4975867928893167 (change=-0.20457224615525355 %)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | right removable region: 93
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | sum of square deviations: 300842850.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | sum of deviations: -13508508499.000004
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | mean x: 1769154421.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | mean y: 2456982.4646464647
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | intersect: 79441398383.67105
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | chi2: 0.8076933189111644
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | current chi2=0.8076933189111644 (change=62.01170186501407 %)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,027 | INFO     | sum of square deviations: 257521107.5
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | sum of deviations: -7990216760.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | mean x: 1769154573.5
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | mean y: 2437517.765957447
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | intersect: 54894747749.890724
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | chi2: 0.7434545707579139
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | current chi2=0.7434545707579139 (change=7.953358861485878 %)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | left removable region: 20
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | sum of square deviations: 120605052.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | sum of deviations: 479515693.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | mean x: 1769154543.0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | mean y: 2448396.301369863
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | intersect: -7031563468.398488
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | chi2: 0.0007917360737796119
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | current memory leak: 3.98 B/s (using 73 data points, chi2=0.00)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | could have reported an average CPU frequency of 3708 MHz (7 samples)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | ..............................
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . Timing measurements:
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . get job = 0 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . initial setup = 3 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . payload setup = 2 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . stage-in = 0 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . payload execution = 6294 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,028 | INFO     | . stage-out = 0 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,029 | INFO     | . log creation = 0 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,029 | INFO     | ..............................
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | 
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | job summary report
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | --------------------------------------------------
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | PanDA job id: 6978100346
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | task id: 48313012
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | errors: (none)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | pilot state: finished 
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | transexitcode: 0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | exeerrorcode: 0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | exeerrordiag: 
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | exitcode: 0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | exitmsg: OK
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | cpuconsumptiontime: 24170 s
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | nevents: 400
[2026-01-23 10:38:07] 2026-01-23 08:37:07,056 | INFO     | neventsw: 0
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | pid: 4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | pgrp: 4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | corecount: 4
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | event service: False
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | sizes: {0: 2283948, 1: 2284409, 11: 2284409, 6301: 2311587, 6302: 2320585, 6304: 2320641, 6305: 2320963}
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | --------------------------------------------------
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | 
[2026-01-23 10:38:07] 2026-01-23 08:37:07,057 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | job 6978100346 has completed (purged errors)
[2026-01-23 10:38:07] 2026-01-23 08:37:07,067 | INFO     | overall cleanup function is called
[2026-01-23 10:38:07] 2026-01-23 08:37:08,074 | INFO     | --- collectZombieJob: --- 10, [4182032]
[2026-01-23 10:38:07] 2026-01-23 08:37:08,074 | INFO     | zombie collector waiting for pid 4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:08,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 10:38:07] 2026-01-23 08:37:08,074 | INFO     | collected zombie processes
[2026-01-23 10:38:07] 2026-01-23 08:37:08,074 | INFO     | will attempt to kill all subprocesses of pid=4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:08,165 | INFO     | process IDs to be killed: [4182032] (in reverse order)
[2026-01-23 10:38:07] 2026-01-23 08:37:08,194 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 10:38:07] 2026-01-23 08:37:08,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 10:38:07] 2026-01-23 08:37:08,197 | INFO     | did not find any defunct processes belonging to 4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:08,199 | INFO     | did not find any defunct processes belonging to 4182032
[2026-01-23 10:38:07] 2026-01-23 08:37:08,199 | INFO     | ready for new job
[2026-01-23 10:38:07] 2026-01-23 08:37:08,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 10:38:07] 2026-01-23 08:37:08,200 | INFO     | **************************************
[2026-01-23 10:38:07] 2026-01-23 08:37:08,200 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 10:38:07] 2026-01-23 08:37:08,200 | INFO     | **************************************
[2026-01-23 10:38:07] 2026-01-23 08:37:08,200 | INFO     | 
[2026-01-23 10:38:07] 2026-01-23 08:37:08,201 | INFO     | architecture information:
[2026-01-23 10:38:07] 2026-01-23 08:37:08,201 | INFO     | executing command: cat /etc/os-release
[2026-01-23 10:38:07] 2026-01-23 08:37:08,206 | INFO     | cat /etc/os-release:
[2026-01-23 10:38:07] NAME="CentOS Linux"
[2026-01-23 10:38:07] VERSION="7 (Core)"
[2026-01-23 10:38:07] ID="centos"
[2026-01-23 10:38:07] ID_LIKE="rhel fedora"
[2026-01-23 10:38:07] VERSION_ID="7"
[2026-01-23 10:38:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 10:38:07] ANSI_COLOR="0;31"
[2026-01-23 10:38:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 10:38:07] HOME_URL="https://www.centos.org/"
[2026-01-23 10:38:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 10:38:07] 
[2026-01-23 10:38:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 10:38:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 10:38:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 10:38:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 10:38:07] 
[2026-01-23 10:38:07] 2026-01-23 08:37:08,206 | INFO     | **************************************
[2026-01-23 10:38:07] 2026-01-23 08:37:08,708 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-23 10:38:07] 2026-01-23 08:37:08,714 | INFO     | sufficient remaining disk space (66881323008 B)
[2026-01-23 10:38:07] 2026-01-23 08:37:08,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 10:38:07] 2026-01-23 08:37:08,714 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 10:38:07] 2026-01-23 08:37:08,714 | INFO     | update_server=False
[2026-01-23 10:38:07] 2026-01-23 08:37:08,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 10:38:07] 2026-01-23 08:37:08,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:38:07] 2026-01-23 08:37:09,135 | WARNING  | process 4182032 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 10:38:07] 2026-01-23 08:37:09,173 | INFO     | all data control threads have been joined
[2026-01-23 10:38:07] 2026-01-23 08:37:09,199 | INFO     | using path: /home/ek/BOINC/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:38:07] 2026-01-23 08:37:09,293 | INFO     | number of running child processes to parent process 4182032: 1
[2026-01-23 10:38:07] 2026-01-23 08:37:09,293 | INFO     | maximum number of monitored processes: 6
[2026-01-23 10:38:07] 2026-01-23 08:37:09,293 | INFO     | aborting job monitoring since job object (job id=6978100346) has expired
[2026-01-23 10:38:07] 2026-01-23 08:37:09,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:38:07] 2026-01-23 08:37:09,293 | INFO     | will abort loop
[2026-01-23 10:38:07] 2026-01-23 08:37:09,343 | INFO     | all payload control threads have been joined
[2026-01-23 10:38:07] 2026-01-23 08:37:09,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 10:38:07] 2026-01-23 08:37:09,720 | INFO     | [job] retrieve thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:09,720 | INFO     | [job] queue monitor thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:09,747 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,175 | INFO     | [payload] validate_post thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,178 | INFO     | [data] control thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,246 | INFO     | [job] validate thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,299 | INFO     | [job] job monitor thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,348 | INFO     | [payload] control thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,408 | INFO     | all job control threads have been joined
[2026-01-23 10:38:07] 2026-01-23 08:37:10,424 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,425 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,574 | INFO     | [data] copytool_in thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:10,662 | INFO     | [payload] failed_post thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:11,413 | INFO     | [job] control thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:11,634 | INFO     | [data] copytool_out thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:12,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 10:38:07] 2026-01-23 08:37:16,141 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:19,712 | INFO     | job.realtimelogging is not enabled
[2026-01-23 10:38:07] 2026-01-23 08:37:20,717 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 10:38:07] 2026-01-23 08:37:38,292 | INFO     | PID=4177403 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 10:38:07] 2026-01-23 08:37:38,292 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 10:38:07] 2026-01-23 08:37:38,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 10:38:07] 2026-01-23 08:37:38,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 10:38:07] 2026-01-23 08:38:00,686 | INFO     | [monitor] cgroup control has ended
[2026-01-23 10:38:07] 2026-01-23 08:38:02,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747172460352)>', '<ExcThread(monitor, started 139746558867200)>']
[2026-01-23 10:38:07] 2026-01-23 08:38:03,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 10:38:07] 2026-01-23 08:38:03,411 | INFO     | [monitor] control thread has ended
[2026-01-23 10:38:07] 2026-01-23 08:38:07,455 | INFO     | all workflow threads have been joined
[2026-01-23 10:38:07] 2026-01-23 08:38:07,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 10:38:07] 2026-01-23 08:38:07,455 | INFO     | traces error code: 0
[2026-01-23 10:38:07] 2026-01-23 08:38:07,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 10:38:07] 2026-01-23 08:38:07,513 [wrapper] ==== pilot stdout END ====
[2026-01-23 10:38:07] 2026-01-23 08:38:07,514 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 10:38:07] 2026-01-23 08:38:07,515 [wrapper] pilotpid: 4177403
[2026-01-23 10:38:07] 2026-01-23 08:38:07,517 [wrapper] Pilot exit status: 0
[2026-01-23 10:38:07] 2026-01-23 08:38:07,521 [wrapper] pandaids: 6978100346
[2026-01-23 10:38:07] 2026-01-23 08:38:07,542 [wrapper] cleanup supervisor_pilot   62582 4177404
[2026-01-23 10:38:07] 2026-01-23 08:38:07,544 [wrapper] Test setup, not cleaning
[2026-01-23 10:38:07] 2026-01-23 08:38:07,545 [wrapper] apfmon messages muted
[2026-01-23 10:38:07] 2026-01-23 08:38:07,547 [wrapper] ==== wrapper stdout END ====
[2026-01-23 10:38:07] 2026-01-23 08:38:07,548 [wrapper] ==== wrapper stderr END ====
[2026-01-23 10:38:07]  *** Error codes and diagnostics ***
[2026-01-23 10:38:07]     "exeErrorCode": 0,
[2026-01-23 10:38:07]     "exeErrorDiag": "",
[2026-01-23 10:38:07]     "pilotErrorCode": 0,
[2026-01-23 10:38:07]     "pilotErrorDiag": "",
[2026-01-23 10:38:07]  *** Listing of results directory ***
[2026-01-23 10:38:07] total 702228
[2026-01-23 10:38:07] -rwx------ 1 ek ek     36322 Jan 21 18:32 runpilot2-wrapper.sh
[2026-01-23 10:38:07] -rw-r--r-- 1 ek ek      5111 Jan 21 18:33 queuedata.json
[2026-01-23 10:38:07] -rw-r--r-- 1 ek ek    584422 Jan 21 18:33 pilot3.tar.gz
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek       100 Jan 23 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 10:38:07] -rwxr-xr-x 1 ek ek      7986 Jan 23 08:51 run_atlas
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek       105 Jan 23 08:51 job.xml
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek 354874791 Jan 23 08:51 EVNT.48313010._000004.pool.root.1
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek    597760 Jan 23 08:51 input.tar.gz
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek     15845 Jan 23 08:51 start_atlas.sh
[2026-01-23 10:38:07] drwxrwx--x 2 ek ek      4096 Jan 23 08:51 shared
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek         0 Jan 23 08:51 boinc_setup_complete
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek      9841 Jan 23 08:51 init_data.xml
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek         0 Jan 23 08:51 boinc_lockfile
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek      2625 Jan 23 08:51 pandaJob.out
[2026-01-23 10:38:07] -rw------- 1 ek ek        50 Jan 23 08:51 setup.sh.local
[2026-01-23 10:38:07] -rw------- 1 ek ek   1003905 Jan 23 08:51 agis_schedconf.cvmfs.json
[2026-01-23 10:38:07] -rw------- 1 ek ek   1516246 Jan 23 08:51 agis_ddmendpoints.agis.ALL.json
[2026-01-23 10:38:07] -rw------- 1 ek ek       433 Jan 23 08:51 workernode_map.json
[2026-01-23 10:38:07] drwx------ 5 ek ek      4096 Jan 23 08:51 pilot3
[2026-01-23 10:38:07] -rw------- 1 ek ek 357662760 Jan 23 10:36 HITS.48313012._000092.pool.root.1
[2026-01-23 10:38:07] -rw------- 1 ek ek      1036 Jan 23 10:36 memory_monitor_summary.json
[2026-01-23 10:38:07] -rw------- 1 ek ek    388158 Jan 23 10:37 log.48313012._000092.job.log.tgz.1
[2026-01-23 10:38:07] -rw------- 1 ek ek      6330 Jan 23 10:37 heartbeat.json
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek       530 Jan 23 10:37 boinc_task_state.xml
[2026-01-23 10:38:07] -rw------- 1 ek ek        95 Jan 23 10:37 pilot_heartbeat.json
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek      8192 Jan 23 10:38 boinc_mmap_file
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek        27 Jan 23 10:38 wrapper_checkpoint.txt
[2026-01-23 10:38:07] -rw------- 1 ek ek      5337 Jan 23 10:38 pilotlog.txt
[2026-01-23 10:38:07] -rw------- 1 ek ek    909319 Jan 23 10:38 log.48313012._000092.job.log.1
[2026-01-23 10:38:07] -rw------- 1 ek ek       357 Jan 23 10:38 output.list
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek       620 Jan 23 10:38 runtime_log
[2026-01-23 10:38:07] -rw------- 1 ek ek   1310720 Jan 23 10:38 result.tar.gz
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek      9501 Jan 23 10:38 runtime_log.err
[2026-01-23 10:38:07] -rw------- 1 ek ek       665 Jan 23 10:38 c9GLDmjJq28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmGsKDmHEVswn.diag
[2026-01-23 10:38:07] -rw-rw-r-- 1 ek ek     20898 Jan 23 10:38 stderr.txt
[2026-01-23 10:38:07] HITS file was successfully produced:
[2026-01-23 10:38:07] -rw------- 1 ek ek 357662760 Jan 23 10:36 shared/HITS.pool.root.1
[2026-01-23 10:38:07]  *** Contents of shared directory: ***
[2026-01-23 10:38:07] total 697732
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek 354874791 Jan 23 08:51 ATLAS.root_0
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek    597760 Jan 23 08:51 input.tar.gz
[2026-01-23 10:38:07] -rw-r--r-- 2 ek ek     15845 Jan 23 08:51 start_atlas.sh
[2026-01-23 10:38:07] -rw------- 1 ek ek 357662760 Jan 23 10:36 HITS.pool.root.1
[2026-01-23 10:38:07] -rw------- 1 ek ek   1310720 Jan 23 10:38 result.tar.gz
10:38:09 (4173395): run_atlas exited; CPU time 24233.376031
10:38:09 (4173395): called boinc_finish(0)

</stderr_txt>
]]>

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