Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:08:19 (365577): wrapper (7.7.26015): starting
10:08:19 (365577): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 10:08:19] Arguments: --nthreads 3
[2026-01-22 10:08:19] Threads: 3
[2026-01-22 10:08:19] Checking for CVMFS
[2026-01-22 10:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 10:08:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 10:08:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 10:08:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 10:08:20] 2.9.2.0 10102 2348 66404 155392 2 188 19601578 36864000 0 130560 0 1001878 99.987 53291 9017 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 10:08:20] CVMFS is ok
[2026-01-22 10:08:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 10:08:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 10:08:20] Further information can be found at the LHC@home message board.
[2026-01-22 10:08:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 10:08:20] Checking for apptainer binary...
[2026-01-22 10:08:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 10:08:20] Running /usr/bin/apptainer --version
[2026-01-22 10:08:20] apptainer version 1.3.6-6.1
[2026-01-22 10:08:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 10:08:20] atlasA226
[2026-01-22 10:08:20] apptainer works
[2026-01-22 10:08:20] Set ATHENA_PROC_NUMBER=3
[2026-01-22 10:08:20] Set ATHENA_CORE_NUMBER=3
[2026-01-22 10:08:20] Starting ATLAS job with PandaID=6977411872
[2026-01-22 10:08:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 11:49:12]  *** The last 200 lines of the pilot log: ***
[2026-01-22 11:49:12]  guid=0f2953ce-d044-40b5-8307-e806767cc614
[2026-01-22 11:49:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 11:49:12]  is_altstaged=None
[2026-01-22 11:49:12]  is_tar=False
[2026-01-22 11:49:12]  lfn=log.48299645._000163.job.log.tgz.1
[2026-01-22 11:49:12]  mtime=0
[2026-01-22 11:49:12]  protocol_id=None
[2026-01-22 11:49:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 11:49:12]  replicas=None
[2026-01-22 11:49:12]  scope=mc23_13p6TeV
[2026-01-22 11:49:12]  status=None
[2026-01-22 11:49:12]  status_code=0
[2026-01-22 11:49:12]  storage_token=
[2026-01-22 11:49:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6977411872/log.48299645._000163.job.log.tgz.1
[2026-01-22 11:49:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/1e/log.48299645._000163.job.log.tgz.1
[2026-01-22 11:49:12]  workdir=None
[2026-01-22 11:49:12] ]
[2026-01-22 11:49:12] 2026-01-22 10:48:35,863 | INFO     | transferring file log.48299645._000163.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6977411872/log.48299645._000163.job.log.tgz.1 to /local/data/boinc/
[2026-01-22 11:49:12] 2026-01-22 10:48:35,863 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6977411872/log.48299645._000163.job.log.tgz.1 /local/data/boinc/slots/0/log.48299645._0001
[2026-01-22 11:49:12] 2026-01-22 10:48:35,876 | INFO     | adding to output.list: log.48299645._000163.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/1e/log.48299645._000163.job.log.tg
[2026-01-22 11:49:12] 2026-01-22 10:48:35,876 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 11:49:12] 2026-01-22 10:48:35,876 | INFO     | summary of transferred files:
[2026-01-22 11:49:12] 2026-01-22 10:48:35,876 | INFO     |  -- lfn=log.48299645._000163.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 11:49:12] 2026-01-22 10:48:35,876 | INFO     | stage-out finished correctly
[2026-01-22 11:49:12] 2026-01-22 10:48:36,959 | INFO     | time since job start (5998s) is within the limit (349056.0s)
[2026-01-22 11:49:12] 2026-01-22 10:48:37,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 11:49:12] 2026-01-22 10:48:38,966 | INFO     | time since job start (6000s) is within the limit (349056.0s)
[2026-01-22 11:49:12] 2026-01-22 10:48:39,095 | WARNING  | process 374062 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 11:49:12] 2026-01-22 10:48:39,095 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6977411872/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 11:49:12] 2026-01-22 10:48:39,129 | INFO     | number of running child processes to parent process 374062: 1
[2026-01-22 11:49:12] 2026-01-22 10:48:39,130 | INFO     | maximum number of monitored processes: 6
[2026-01-22 11:49:12] 2026-01-22 10:48:40,389 | INFO     | job 6977411872 has state=finished
[2026-01-22 11:49:12] 2026-01-22 10:48:40,389 | INFO     | preparing for final server update for job 6977411872 in state='finished'
[2026-01-22 11:49:12] 2026-01-22 10:48:40,389 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6977411872/jobReport.json
[2026-01-22 11:49:12] 2026-01-22 10:48:40,393 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-22 11:49:12] 2026-01-22 10:48:40,394 | INFO     | this job has now completed (state=finished)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,394 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,394 | INFO     | log transfer has been attempted: DONE
[2026-01-22 11:49:12] 2026-01-22 10:48:40,394 | INFO     | job 6977411872 has finished - writing final server update
[2026-01-22 11:49:12] 2026-01-22 10:48:40,394 | INFO     | total number of processed events: 400 (read)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6977411872/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | INFO     | extracted standard info from prmon json
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 11:49:12] 2026-01-22 10:48:40,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | fitting pss+swap vs Time
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | sum of square deviations: 233641590.0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | sum of deviations: -587242486.0000002
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | mean x: 1769075987.0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | mean y: 2589188.1428571427
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | intersect: 4449043180.04038
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | chi2: 0.012156474522026473
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | current memory leak: -2.51 B/s (using 91 data points, chi2=0.01)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | could have reported an average CPU frequency of 4300 MHz (7 samples)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | ..............................
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | . Timing measurements:
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | . get job = 0 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,396 | INFO     | . initial setup = 5 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | . payload setup = 5 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | . stage-in = 0 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | . payload execution = 5976 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | . stage-out = 0 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | . log creation = 0 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,397 | INFO     | ..............................
[2026-01-22 11:49:12] 2026-01-22 10:48:40,423 | INFO     | 
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | job summary report
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | --------------------------------------------------
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | PanDA job id: 6977411872
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | task id: 48299645
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | errors: (none)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | pilot state: finished 
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | transexitcode: 0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | exeerrorcode: 0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | exeerrordiag: 
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | exitcode: 0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | exitmsg: OK
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | cpuconsumptiontime: 17237 s
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | nevents: 400
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | neventsw: 0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | pid: 374062
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | pgrp: 374062
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | corecount: 3
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | event service: False
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | sizes: {0: 2283961, 1: 2284422, 11: 2284422, 5985: 2311302, 5987: 2320306, 5989: 2320362, 5991: 2320684}
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | --------------------------------------------------
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | 
[2026-01-22 11:49:12] 2026-01-22 10:48:40,424 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 11:49:12] 2026-01-22 10:48:40,439 | INFO     | job 6977411872 has completed (purged errors)
[2026-01-22 11:49:12] 2026-01-22 10:48:40,439 | INFO     | overall cleanup function is called
[2026-01-22 11:49:12] 2026-01-22 10:48:41,445 | INFO     | --- collectZombieJob: --- 10, [374062]
[2026-01-22 11:49:12] 2026-01-22 10:48:41,445 | INFO     | zombie collector waiting for pid 374062
[2026-01-22 11:49:12] 2026-01-22 10:48:41,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 11:49:12] 2026-01-22 10:48:41,446 | INFO     | collected zombie processes
[2026-01-22 11:49:12] 2026-01-22 10:48:41,446 | INFO     | will attempt to kill all subprocesses of pid=374062
[2026-01-22 11:49:12] 2026-01-22 10:48:41,484 | INFO     | process IDs to be killed: [374062] (in reverse order)
[2026-01-22 11:49:12] 2026-01-22 10:48:41,510 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 11:49:12] 2026-01-22 10:48:41,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 11:49:12] 2026-01-22 10:48:41,512 | INFO     | did not find any defunct processes belonging to 374062
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | did not find any defunct processes belonging to 374062
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | ready for new job
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | **************************************
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | **************************************
[2026-01-22 11:49:12] 2026-01-22 10:48:41,513 | INFO     | 
[2026-01-22 11:49:12] 2026-01-22 10:48:41,514 | INFO     | architecture information:
[2026-01-22 11:49:12] 2026-01-22 10:48:41,514 | INFO     | executing command: cat /etc/os-release
[2026-01-22 11:49:12] 2026-01-22 10:48:41,524 | INFO     | cat /etc/os-release:
[2026-01-22 11:49:12] NAME="CentOS Linux"
[2026-01-22 11:49:12] VERSION="7 (Core)"
[2026-01-22 11:49:12] ID="centos"
[2026-01-22 11:49:12] ID_LIKE="rhel fedora"
[2026-01-22 11:49:12] VERSION_ID="7"
[2026-01-22 11:49:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 11:49:12] ANSI_COLOR="0;31"
[2026-01-22 11:49:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 11:49:12] HOME_URL="https://www.centos.org/"
[2026-01-22 11:49:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 11:49:12] 
[2026-01-22 11:49:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 11:49:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 11:49:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 11:49:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 11:49:12] 
[2026-01-22 11:49:12] 2026-01-22 10:48:41,524 | INFO     | **************************************
[2026-01-22 11:49:12] 2026-01-22 10:48:42,027 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | INFO     | sufficient remaining disk space (335832678400 B)
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | INFO     | update_server=False
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 11:49:12] 2026-01-22 10:48:42,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 11:49:12] 2026-01-22 10:48:42,079 | INFO     | all payload control threads have been joined
[2026-01-22 11:49:12] 2026-01-22 10:48:42,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 11:49:12] 2026-01-22 10:48:42,639 | INFO     | aborting loop
[2026-01-22 11:49:12] 2026-01-22 10:48:43,045 | INFO     | [job] retrieve thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,046 | INFO     | [job] queue monitor thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,085 | INFO     | [payload] control thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,139 | INFO     | [payload] validate_post thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,141 | INFO     | all data control threads have been joined
[2026-01-22 11:49:12] 2026-01-22 10:48:43,386 | INFO     | [data] copytool_in thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,543 | INFO     | [job] validate thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,568 | INFO     | all job control threads have been joined
[2026-01-22 11:49:12] 2026-01-22 10:48:43,645 | INFO     | [job] job monitor thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,648 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,680 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:43,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 11:49:12] 2026-01-22 10:48:43,996 | INFO     | [payload] failed_post thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:44,046 | INFO     | [data] copytool_out thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:44,091 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:44,147 | INFO     | [data] control thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:44,574 | INFO     | [job] control thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:45,726 | INFO     | [monitor] cgroup control has ended
[2026-01-22 11:49:12] 2026-01-22 10:48:47,969 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:52,295 | INFO     | job.realtimelogging is not enabled
[2026-01-22 11:49:12] 2026-01-22 10:48:53,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 11:49:12] 2026-01-22 10:48:54,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674293495616)>', '<ExcThread(monitor, started 140673667823360)>']
[2026-01-22 11:49:12] 2026-01-22 10:48:59,614 | INFO     | all workflow threads have been joined
[2026-01-22 11:49:12] 2026-01-22 10:48:59,614 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 11:49:12] 2026-01-22 10:48:59,615 | INFO     | traces error code: 0
[2026-01-22 11:49:12] 2026-01-22 10:48:59,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | INFO     | PID=369630 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 11:49:12] 2026-01-22 10:49:12,083 | INFO     | [monitor] control thread has ended
[2026-01-22 11:49:12] 2026-01-22 10:49:12,125 [wrapper] ==== pilot stdout END ====
[2026-01-22 11:49:12] 2026-01-22 10:49:12,128 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 11:49:12] 2026-01-22 10:49:12,131 [wrapper] pilotpid: 369630
[2026-01-22 11:49:12] 2026-01-22 10:49:12,134 [wrapper] Pilot exit status: 0
[2026-01-22 11:49:12] 2026-01-22 10:49:12,142 [wrapper] pandaids: 6977411872
[2026-01-22 11:49:12] 2026-01-22 10:49:12,159 [wrapper] cleanup supervisor_pilot  379508 369631
[2026-01-22 11:49:12] 2026-01-22 10:49:12,162 [wrapper] Test setup, not cleaning
[2026-01-22 11:49:12] 2026-01-22 10:49:12,165 [wrapper] apfmon messages muted
[2026-01-22 11:49:12] 2026-01-22 10:49:12,168 [wrapper] ==== wrapper stdout END ====
[2026-01-22 11:49:12] 2026-01-22 10:49:12,171 [wrapper] ==== wrapper stderr END ====
[2026-01-22 11:49:12]  *** Error codes and diagnostics ***
[2026-01-22 11:49:12]     "exeErrorCode": 0,
[2026-01-22 11:49:12]     "exeErrorDiag": "",
[2026-01-22 11:49:12]     "pilotErrorCode": 0,
[2026-01-22 11:49:12]     "pilotErrorDiag": "",
[2026-01-22 11:49:12]  *** Listing of results directory ***
[2026-01-22 11:49:12] total 422176
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc    584422 Jan 21 14:43 pilot3.tar.gz
[2026-01-22 11:49:12] -rwx------ 1 boinc boinc     36322 Jan 21 14:44 runpilot2-wrapper.sh
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc      5111 Jan 21 14:47 queuedata.json
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc       100 Jan 22 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 11:49:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 10:08 run_atlas
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc       105 Jan 22 10:08 job.xml
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc 256986358 Jan 22 10:08 EVNT.48299643._000007.pool.root.1
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc      6680 Jan 22 10:08 init_data.xml
[2026-01-22 11:49:12] drwxrwx--x 2 boinc boinc      4096 Jan 22 10:08 shared
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc    597782 Jan 22 10:08 input.tar.gz
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc     15845 Jan 22 10:08 start_atlas.sh
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc         0 Jan 22 10:08 boinc_lockfile
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc      2637 Jan 22 10:08 pandaJob.out
[2026-01-22 11:49:12] -rw------- 1 boinc boinc   1002771 Jan 22 10:08 agis_schedconf.cvmfs.json
[2026-01-22 11:49:12] -rw------- 1 boinc boinc   1516246 Jan 22 10:08 agis_ddmendpoints.agis.ALL.json
[2026-01-22 11:49:12] -rw------- 1 boinc boinc       421 Jan 22 10:08 workernode_map.json
[2026-01-22 11:49:12] drwx------ 5 boinc boinc      4096 Jan 22 10:08 pilot3
[2026-01-22 11:49:12] -rw------- 1 boinc boinc 169108081 Jan 22 11:48 HITS.48299645._000163.pool.root.1
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc       529 Jan 22 11:48 boinc_task_state.xml
[2026-01-22 11:49:12] -rw------- 1 boinc boinc      1016 Jan 22 11:48 memory_monitor_summary.json
[2026-01-22 11:49:12] -rw------- 1 boinc boinc    268203 Jan 22 11:48 log.48299645._000163.job.log.tgz.1
[2026-01-22 11:49:12] -rw------- 1 boinc boinc      6289 Jan 22 11:48 heartbeat.json
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc        27 Jan 22 11:48 wrapper_checkpoint.txt
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc      8192 Jan 22 11:48 boinc_mmap_file
[2026-01-22 11:49:12] -rw------- 1 boinc boinc       746 Jan 22 11:49 pilotlog.txt
[2026-01-22 11:49:12] -rw------- 1 boinc boinc        95 Jan 22 11:49 pilot_heartbeat.json
[2026-01-22 11:49:12] -rw------- 1 boinc boinc    868571 Jan 22 11:49 log.48299645._000163.job.log.1
[2026-01-22 11:49:12] -rw------- 1 boinc boinc       357 Jan 22 11:49 output.list
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc       620 Jan 22 11:49 runtime_log
[2026-01-22 11:49:12] -rw------- 1 boinc boinc   1157120 Jan 22 11:49 result.tar.gz
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc      8911 Jan 22 11:49 runtime_log.err
[2026-01-22 11:49:12] -rw------- 1 boinc boinc       660 Jan 22 11:49 MQ4KDmBhn28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWfyKDma1bhcm.diag
[2026-01-22 11:49:12] -rw-r--r-- 1 boinc boinc     21391 Jan 22 11:49 stderr.txt
[2026-01-22 11:49:12] HITS file was successfully produced:
[2026-01-22 11:49:12] -rw------- 1 boinc boinc 169108081 Jan 22 11:48 shared/HITS.pool.root.1
[2026-01-22 11:49:12]  *** Contents of shared directory: ***
[2026-01-22 11:49:12] total 417852
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc 256986358 Jan 22 10:08 ATLAS.root_0
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc    597782 Jan 22 10:08 input.tar.gz
[2026-01-22 11:49:12] -rw-r--r-- 2 boinc boinc     15845 Jan 22 10:08 start_atlas.sh
[2026-01-22 11:49:12] -rw------- 1 boinc boinc 169108081 Jan 22 11:48 HITS.pool.root.1
[2026-01-22 11:49:12] -rw------- 1 boinc boinc   1157120 Jan 22 11:49 result.tar.gz
11:49:34 (365577): run_atlas exited; CPU time 17271.549676
11:49:34 (365577): called boinc_finish(0)

</stderr_txt>
]]>

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