Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-22 16:15:49 (33276): vboxwrapper version 26210
2026-01-22 16:15:49 (33276): BOINC client version: 8.2.8
2026-01-22 16:15:49 (33276): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-22 16:15:50 (33276): Successfully copied 'init_data.xml' to the shared directory.
2026-01-22 16:15:50 (33276): Create VM. (boinc_07d3574e5a013229, slot#4)
2026-01-22 16:15:50 (33276): Setting Memory Size for VM. (4800MB)
2026-01-22 16:15:51 (33276): Setting CPU Count for VM. (8)
2026-01-22 16:15:51 (33276): Setting Chipset Options for VM.
2026-01-22 16:15:51 (33276): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-22 16:15:51 (33276): Setting Boot Options for VM.
2026-01-22 16:15:52 (33276): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-22 16:15:52 (33276): Enabling VM Network Access.
2026-01-22 16:15:52 (33276): Disabling USB Support for VM.
2026-01-22 16:15:53 (33276): Disabling COM Port Support for VM.
2026-01-22 16:15:53 (33276): Disabling LPT Port Support for VM.
2026-01-22 16:15:53 (33276): Disabling Audio Support for VM.
2026-01-22 16:15:53 (33276): Disabling Clipboard Support for VM.
2026-01-22 16:15:54 (33276): Disabling Drag and Drop Support for VM.
2026-01-22 16:15:54 (33276): Adding storage controller(s) to VM.
2026-01-22 16:15:54 (33276): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-22 16:15:55 (33276): Adding VirtualBox Guest Additions to VM.
2026-01-22 16:15:55 (33276): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-22 16:15:55 (33276): forwarding host port 51602 to guest port 80
2026-01-22 16:15:55 (33276): Enabling remote desktop for VM.
2026-01-22 16:15:56 (33276): Required extension pack not installed, remote desktop not enabled.
2026-01-22 16:15:56 (33276): Enabling shared directory for VM.
2026-01-22 16:15:56 (33276): Starting VM using VBoxManage interface. (boinc_07d3574e5a013229, slot#4)
2026-01-22 16:16:00 (33276): Successfully started VM. (PID = '37920')
2026-01-22 16:16:00 (33276): Reporting VM Process ID to BOINC.
2026-01-22 16:16:00 (33276): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-22 16:16:00 (33276): Guest Log: CPUID EDX: 0x178bfbff
2026-01-22 16:16:00 (33276): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-22 16:16:00 (33276): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-22 16:16:00 (33276): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-22 16:16:00 (33276): Detected: Web Application Enabled (http://localhost:51602)
2026-01-22 16:16:00 (33276): Preference change detected
2026-01-22 16:16:00 (33276): Setting CPU throttle for VM. (75%)
2026-01-22 16:16:00 (33276): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-22 16:16:02 (33276): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-22 16:16:02 (33276): Guest Log: BIOS: Booting from Hard Disk...
2026-01-22 16:16:05 (33276): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-22 16:16:05 (33276): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-22 16:16:05 (33276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-22 16:16:09 (33276): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-22 16:16:09 (33276): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-22 16:16:13 (33276): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000076 main     Log opened 2026-01-22T16:16:11.808703000Z
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000135 main     OS Product: Linux
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000147 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000156 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000167 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000167 main     Process ID: 1371
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000167 main     Package type: LINUX_64BITS_GENERIC
2026-01-22 16:16:13 (33276): Guest Log: 00:00:00.000526 main     5.2.32 r132073 started. Verbose level = 0
2026-01-22 16:16:13 (33276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-22 16:16:13 (33276): Guest Log: [INFO] Mounting shared directory
2026-01-22 16:16:13 (33276): Guest Log: [INFO] Checking for init_data.xml
2026-01-22 16:16:23 (33276): Guest Log: 00:00:10.034327 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 877 439 000ns (GuestNow=1 769 058 982 932 605 000 ns GuestLast=1 769 098 571 810 044 000 ns fSetTimeLastLoop=true )
2026-01-22 16:16:55 (33276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-22 16:16:55 (33276): Guest Log: [INFO] Detected branch: prod
2026-01-22 16:16:56 (33276): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-22 16:16:56 (33276): Guest Log: Copying input files
2026-01-22 16:16:57 (33276): Guest Log: Copied input files into RunAtlas.
2026-01-22 16:16:57 (33276): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-22 16:16:57 (33276): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-22 16:16:57 (33276): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-22 16:16:57 (33276): Guest Log: Further information can be found at the LHC@home message board.
2026-01-22 16:17:59 (33276): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-22 16:18:00 (33276): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-22 16:18:00 (33276): Guest Log: 2.6.3.0 1657 1 32192 155392 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-22 16:18:00 (33276): Guest Log: copied the webapp to /var/www
2026-01-22 16:18:00 (33276): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-22 16:18:00 (33276): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-22 16:18:02 (33276): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-22 16:18:02 (33276): Guest Log:  *** Starting ATLAS job. (PandaID=6976469350 taskID=47961985) ***
2026-01-22 17:56:00 (33276): Status Report: Elapsed Time: '6000.000000'
2026-01-22 17:56:00 (33276): Status Report: CPU Time: '21899.500000'
2026-01-22 19:35:59 (33276): Status Report: Elapsed Time: '12000.000000'
2026-01-22 19:35:59 (33276): Status Report: CPU Time: '57840.546875'
2026-01-22 21:02:04 (33276): Guest Log:  *** Job finished ***
2026-01-22 21:02:04 (33276): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:50,971 | INFO     | all workflow threads have been joined
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:50,971 | INFO     | end of generic workflow (traces error code: 0)
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:50,971 | INFO     | traces error code: 0
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:50,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | INFO     | PID=6133 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | INFO     | found 0 job(s) in 20 queues
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:58,966 | INFO     | [monitor] control thread has ended
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,064 [wrapper] ==== pilot stdout END ====
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,067 [wrapper] ==== wrapper stdout RESUME ====
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,069 [wrapper] pilotpid: 6133
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,071 [wrapper] Pilot exit status: 0
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,078 [wrapper] pandaids: 6976469350
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,092 [wrapper] cleanup supervisor_pilot 30054 6134
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,095 [wrapper] Test setup, not cleaning
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,097 [wrapper] apfmon messages muted
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,100 [wrapper] ==== wrapper stdout END ====
2026-01-22 21:02:04 (33276): Guest Log: 2026-01-22 10:14:59,102 [wrapper] ==== wrapper stderr END ====
2026-01-22 21:02:04 (33276): Guest Log:  *** Error codes and diagnostics ***
2026-01-22 21:02:04 (33276): Guest Log:     "exeErrorCode": 0,
2026-01-22 21:02:04 (33276): Guest Log:     "exeErrorDiag": "",
2026-01-22 21:02:04 (33276): Guest Log:     "pilotErrorCode": 0,
2026-01-22 21:02:04 (33276): Guest Log:     "pilotErrorDiag": "",
2026-01-22 21:02:04 (33276): Guest Log:  *** Listing of results directory ***
2026-01-22 21:02:04 (33276): Guest Log: total 343456
2026-01-22 21:02:04 (33276): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 20 14:43 pilot3.tar.gz
2026-01-22 21:02:04 (33276): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 20 14:55 runpilot2-wrapper.sh
2026-01-22 21:02:04 (33276): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 20 14:57 queuedata.json
2026-01-22 21:02:04 (33276): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 22 05:16 start_atlas.sh
2026-01-22 21:02:04 (33276): Guest Log: -rwxr-xr-x. 1 atlas atlas    597963 Jan 22 05:16 input.tar.gz
2026-01-22 21:02:04 (33276): Guest Log: -rwxr-xr-x. 1 atlas atlas      8815 Jan 22 05:16 init_data.xml
2026-01-22 21:02:04 (33276): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 22 05:16 EVNT.47961981._000043.pool.root.1 -> /data/./ATLAS.root_0
2026-01-22 21:02:04 (33276): Guest Log: -rw-r--r--. 1 atlas atlas      2875 Jan 22 05:18 pandaJob.out
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas   1002771 Jan 22 05:21 agis_schedconf.cvmfs.json
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas       422 Jan 22 05:21 workernode_map.json
2026-01-22 21:02:04 (33276): Guest Log: drwx------. 5 atlas atlas      4096 Jan 22 05:22 pilot3
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas 340071288 Jan 22 10:13 HITS.47961985._001315.pool.root.1
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas        95 Jan 22 10:14 pilot_heartbeat.json
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas      1045 Jan 22 10:14 memory_monitor_summary.json
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 22 10:14 agis_ddmendpoints.agis.ALL.json
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas   1448991 Jan 22 10:14 log.47961985._001315.job.log.tgz.1
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas      6954 Jan 22 10:14 heartbeat.json
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas       744 Jan 22 10:14 pilotlog.txt
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas   2431185 Jan 22 10:14 log.47961985._001315.job.log.1
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas       353 Jan 22 10:14 output.list
2026-01-22 21:02:04 (33276): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 22 10:14 runtime_log
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas   3901440 Jan 22 10:14 result.tar.gz
2026-01-22 21:02:04 (33276): Guest Log: -rw-r--r--. 1 atlas atlas      8755 Jan 22 10:14 runtime_log.err
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas       663 Jan 22 10:14 1PRKDmGKS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiWvKDmq0w5Qn.diag
2026-01-22 21:02:04 (33276): Guest Log: Looking for outputfile HITS.47961985._001315.pool.root.1
2026-01-22 21:02:04 (33276): Guest Log: HITS file was successfully produced
2026-01-22 21:02:04 (33276): Guest Log: -rw-------. 1 atlas atlas 340071288 Jan 22 10:13 /home/atlas/RunAtlas/HITS.47961985._001315.pool.root.1
2026-01-22 21:02:05 (33276): Guest Log: Successfully finished the ATLAS job!
2026-01-22 21:02:05 (33276): Guest Log: Copying the results back to the shared directory!
2026-01-22 21:02:05 (33276): Guest Log:  *** Contents of shared directory: ***
2026-01-22 21:02:05 (33276): Guest Log: total 739712
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root 412858683 Jan 22 05:15 ATLAS.root_0
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root 340071288 Jan 22 10:02 HITS.pool.root.1
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root      8815 Jan 22 05:15 init_data.xml
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root    597963 Jan 21 23:38 input.tar.gz
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root   3901440 Jan 22 10:02 result.tar.gz
2026-01-22 21:02:05 (33276): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 23:38 start_atlas.sh
2026-01-22 21:02:05 (33276): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-22 21:02:05 (33276): VM Completion File Detected.
2026-01-22 21:02:05 (33276): Powering off VM.
2026-01-22 21:02:05 (33276): Successfully stopped VM.
2026-01-22 21:02:05 (33276): Deregistering VM. (boinc_07d3574e5a013229, slot#4)
2026-01-22 21:02:05 (33276): Removing network bandwidth throttle group from VM.
2026-01-22 21:02:06 (33276): Removing VM from VirtualBox.
2026-01-22 21:02:11 (33276): called boinc_finish(0)

</stderr_txt>
]]>

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