Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:54:13 (322190): wrapper (7.7.26015): starting
04:54:13 (322190): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 04:54:13] Arguments: --nthreads 3
[2026-01-22 04:54:13] Threads: 3
[2026-01-22 04:54:13] Checking for CVMFS
[2026-01-22 04:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 04:54:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 04:54:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 04:54:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 04:54:14] 2.9.2.0 10102 2034 65508 155392 0 188 19591079 36864000 0 130560 0 881140 99.985 53245 9287 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 04:54:14] CVMFS is ok
[2026-01-22 04:54:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 04:54:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 04:54:14] Further information can be found at the LHC@home message board.
[2026-01-22 04:54:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 04:54:14] Checking for apptainer binary...
[2026-01-22 04:54:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 04:54:14] Running /usr/bin/apptainer --version
[2026-01-22 04:54:14] apptainer version 1.3.6-6.1
[2026-01-22 04:54:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 04:54:14] atlasA226
[2026-01-22 04:54:14] apptainer works
[2026-01-22 04:54:15] Set ATHENA_PROC_NUMBER=3
[2026-01-22 04:54:15] Set ATHENA_CORE_NUMBER=3
[2026-01-22 04:54:15] Starting ATLAS job with PandaID=6976948445
[2026-01-22 04:54:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 06:50:43]  *** The last 200 lines of the pilot log: ***
[2026-01-22 06:50:43] 2026-01-22 05:49:36,962 | INFO     | sum of deviations: 14448100222.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,962 | INFO     | mean x: 1769057506.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,962 | INFO     | mean y: 2557758.6017699116
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | intersect: -57128590732.728874
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | chi2: 1.5171555927031264
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | sum of square deviations: 390582207.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | sum of deviations: 13616394807.000002
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | mean x: 1769057353.5
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | mean y: 2555524.1481481483
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | intersect: -61669950109.17316
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | chi2: 1.5203752212984039
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | current chi2=1.5203752212984039 (change=-0.212214792652943 %)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | right removable region: 107
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | sum of square deviations: 390582207.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | sum of deviations: -2565129056.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | mean x: 1769057658.5
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | mean y: 2602408.222222222
[2026-01-22 06:50:43] 2026-01-22 05:49:36,963 | INFO     | intersect: 11620799858.670023
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | chi2: 0.023792860192573168
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | current chi2=0.023792860192573168 (change=98.43174554363398 %)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | sum of square deviations: 338804492.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | sum of deviations: -568676648.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | mean x: 1769057811.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | mean y: 2596508.3203883497
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | intersect: 2971925102.929746
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | chi2: 0.014876693744735187
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | current chi2=0.014876693744735187 (change=37.47412616924939 %)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | sum of square deviations: 291817564.5
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | sum of deviations: 1467154523.5
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | mean x: 1769057963.5
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | mean y: 2589930.397959184
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | intersect: -8891601884.031782
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | chi2: 0.0003330334514557328
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | current chi2=0.0003330334514557328 (change=97.76137455559578 %)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,964 | INFO     | sum of square deviations: 249388862.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | sum of deviations: 1318287348.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | mean x: 1769058116.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | mean y: 2590467.1720430106
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | intersect: -9348777166.076616
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | chi2: 0.00031340685401765186
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | current chi2=0.00031340685401765186 (change=5.8932810960251985 %)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | left removable region: 40
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | sum of square deviations: 93240818.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | sum of deviations: 734437438.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | mean x: 1769058543.0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | mean y: 2591181.776119403
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | intersect: -13931894292.095774
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | chi2: 8.456032193087714e-05
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | current memory leak: 7.88 B/s (using 67 data points, chi2=0.00)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | could have reported an average CPU frequency of 4369 MHz (7 samples)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | ..............................
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | . Timing measurements:
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | . get job = 0 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,965 | INFO     | . initial setup = 4 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | . payload setup = 6 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | . stage-in = 0 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | . payload execution = 6882 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | . stage-out = 0 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | . log creation = 0 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,966 | INFO     | ..............................
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | 
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | job summary report
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | --------------------------------------------------
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | PanDA job id: 6976948445
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | task id: 48298445
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | errors: (none)
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | pilot state: finished 
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | transexitcode: 0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | exeerrorcode: 0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | exeerrordiag: 
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | exitcode: 0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | exitmsg: OK
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | cpuconsumptiontime: 19965 s
[2026-01-22 06:50:43] 2026-01-22 05:49:36,993 | INFO     | nevents: 400
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | neventsw: 0
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | pid: 330668
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | pgrp: 330668
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | corecount: 3
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | event service: False
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | sizes: {0: 2284364, 11: 2284364, 6892: 2320681, 6893: 2320681, 6896: 2320875}
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | --------------------------------------------------
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | 
[2026-01-22 06:50:43] 2026-01-22 05:49:36,994 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | job 6976948445 has completed (purged errors)
[2026-01-22 06:50:43] 2026-01-22 05:49:37,009 | INFO     | overall cleanup function is called
[2026-01-22 06:50:43] 2026-01-22 05:49:37,102 | WARNING  | process 330668 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 06:50:43] 2026-01-22 05:49:37,131 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 06:50:43] 2026-01-22 05:49:37,166 | INFO     | number of running child processes to parent process 330668: 1
[2026-01-22 06:50:43] 2026-01-22 05:49:37,166 | INFO     | maximum number of monitored processes: 6
[2026-01-22 06:50:43] 2026-01-22 05:49:37,166 | INFO     | aborting job monitoring since job object (job id=6976948445) has expired
[2026-01-22 06:50:43] 2026-01-22 05:49:38,015 | INFO     | --- collectZombieJob: --- 10, [330668]
[2026-01-22 06:50:43] 2026-01-22 05:49:38,016 | INFO     | zombie collector waiting for pid 330668
[2026-01-22 06:50:43] 2026-01-22 05:49:38,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 06:50:43] 2026-01-22 05:49:38,016 | INFO     | collected zombie processes
[2026-01-22 06:50:43] 2026-01-22 05:49:38,016 | INFO     | will attempt to kill all subprocesses of pid=330668
[2026-01-22 06:50:43] 2026-01-22 05:49:38,092 | INFO     | process IDs to be killed: [330668] (in reverse order)
[2026-01-22 06:50:43] 2026-01-22 05:49:38,118 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 06:50:43] 2026-01-22 05:49:38,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 06:50:43] 2026-01-22 05:49:38,120 | INFO     | did not find any defunct processes belonging to 330668
[2026-01-22 06:50:43] 2026-01-22 05:49:38,120 | INFO     | did not find any defunct processes belonging to 330668
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | ready for new job
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | **************************************
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | **************************************
[2026-01-22 06:50:43] 2026-01-22 05:49:38,121 | INFO     | 
[2026-01-22 06:50:43] 2026-01-22 05:49:38,122 | INFO     | architecture information:
[2026-01-22 06:50:43] 2026-01-22 05:49:38,122 | INFO     | executing command: cat /etc/os-release
[2026-01-22 06:50:43] 2026-01-22 05:49:38,132 | INFO     | cat /etc/os-release:
[2026-01-22 06:50:43] NAME="CentOS Linux"
[2026-01-22 06:50:43] VERSION="7 (Core)"
[2026-01-22 06:50:43] ID="centos"
[2026-01-22 06:50:43] ID_LIKE="rhel fedora"
[2026-01-22 06:50:43] VERSION_ID="7"
[2026-01-22 06:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 06:50:43] ANSI_COLOR="0;31"
[2026-01-22 06:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 06:50:43] HOME_URL="https://www.centos.org/"
[2026-01-22 06:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 06:50:43] 
[2026-01-22 06:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 06:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 06:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 06:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 06:50:43] 
[2026-01-22 06:50:43] 2026-01-22 05:49:38,132 | INFO     | **************************************
[2026-01-22 06:50:43] 2026-01-22 05:49:38,636 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-22 06:50:43] 2026-01-22 05:49:38,648 | INFO     | sufficient remaining disk space (336266788864 B)
[2026-01-22 06:50:43] 2026-01-22 05:49:38,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 06:50:43] 2026-01-22 05:49:38,648 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | INFO     | update_server=False
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 06:50:43] 2026-01-22 05:49:38,649 | INFO     | aborting loop
[2026-01-22 06:50:43] 2026-01-22 05:49:39,037 | INFO     | all data control threads have been joined
[2026-01-22 06:50:43] 2026-01-22 05:49:39,467 | INFO     | all job control threads have been joined
[2026-01-22 06:50:43] 2026-01-22 05:49:39,654 | INFO     | [job] queue monitor thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:39,655 | INFO     | [job] retrieve thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:39,656 | INFO     | [job] job monitor thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:39,732 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:39,996 | INFO     | all payload control threads have been joined
[2026-01-22 06:50:43] 2026-01-22 05:49:40,043 | INFO     | [data] control thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:40,167 | INFO     | [payload] validate_post thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:40,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 06:50:43] 2026-01-22 05:49:40,473 | INFO     | [job] control thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:40,589 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:40,655 | INFO     | [data] copytool_out thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:40,680 | INFO     | [job] validate thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:41,002 | INFO     | [payload] control thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:41,008 | INFO     | [data] copytool_in thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:41,044 | INFO     | [payload] failed_post thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:41,050 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:44,373 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:49:49,274 | INFO     | job.realtimelogging is not enabled
[2026-01-22 06:50:43] 2026-01-22 05:49:50,279 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 06:50:43] 2026-01-22 05:50:08,767 | INFO     | PID=326243 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-22 06:50:43] 2026-01-22 05:50:09,018 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 06:50:43] 2026-01-22 05:50:09,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 06:50:43] 2026-01-22 05:50:09,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 06:50:43] 2026-01-22 05:50:38,459 | INFO     | [monitor] cgroup control has ended
[2026-01-22 06:50:43] 2026-01-22 05:50:38,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234639275840)>', '<ExcThread(monitor, started 140234138302208)>']
[2026-01-22 06:50:43] 2026-01-22 05:50:39,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 06:50:43] 2026-01-22 05:50:39,174 | INFO     | [monitor] control thread has ended
[2026-01-22 06:50:43] 2026-01-22 05:50:43,781 | INFO     | all workflow threads have been joined
[2026-01-22 06:50:43] 2026-01-22 05:50:43,781 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 06:50:43] 2026-01-22 05:50:43,782 | INFO     | traces error code: 0
[2026-01-22 06:50:43] 2026-01-22 05:50:43,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 06:50:43] 2026-01-22 05:50:43,826 [wrapper] ==== pilot stdout END ====
[2026-01-22 06:50:43] 2026-01-22 05:50:43,829 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 06:50:43] 2026-01-22 05:50:43,832 [wrapper] pilotpid: 326243
[2026-01-22 06:50:43] 2026-01-22 05:50:43,835 [wrapper] Pilot exit status: 0
[2026-01-22 06:50:43] 2026-01-22 05:50:43,843 [wrapper] pandaids: 6976948445
[2026-01-22 06:50:43] 2026-01-22 05:50:43,861 [wrapper] cleanup supervisor_pilot  336944 326244
[2026-01-22 06:50:43] 2026-01-22 05:50:43,864 [wrapper] Test setup, not cleaning
[2026-01-22 06:50:43] 2026-01-22 05:50:43,867 [wrapper] apfmon messages muted
[2026-01-22 06:50:43] 2026-01-22 05:50:43,869 [wrapper] ==== wrapper stdout END ====
[2026-01-22 06:50:43] 2026-01-22 05:50:43,872 [wrapper] ==== wrapper stderr END ====
[2026-01-22 06:50:43]  *** Error codes and diagnostics ***
[2026-01-22 06:50:43]     "exeErrorCode": 0,
[2026-01-22 06:50:43]     "exeErrorDiag": "",
[2026-01-22 06:50:43]     "pilotErrorCode": 0,
[2026-01-22 06:50:43]     "pilotErrorDiag": "",
[2026-01-22 06:50:43]  *** Listing of results directory ***
[2026-01-22 06:50:43] total 417196
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc    584422 Jan 20 22:34 pilot3.tar.gz
[2026-01-22 06:50:43] -rwx------ 1 boinc boinc     36322 Jan 20 22:37 runpilot2-wrapper.sh
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc      5111 Jan 20 22:39 queuedata.json
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc       100 Jan 22 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 06:50:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 04:54 run_atlas
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc       105 Jan 22 04:54 job.xml
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc 248485567 Jan 22 04:54 EVNT.48298442._000003.pool.root.1
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc      6679 Jan 22 04:54 init_data.xml
[2026-01-22 06:50:43] drwxrwx--x 2 boinc boinc      4096 Jan 22 04:54 shared
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc    597775 Jan 22 04:54 input.tar.gz
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc     15845 Jan 22 04:54 start_atlas.sh
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc         0 Jan 22 04:54 boinc_lockfile
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc      2611 Jan 22 04:54 pandaJob.out
[2026-01-22 06:50:43] -rw------- 1 boinc boinc   1002771 Jan 22 04:54 agis_schedconf.cvmfs.json
[2026-01-22 06:50:43] -rw------- 1 boinc boinc   1516246 Jan 22 04:54 agis_ddmendpoints.agis.ALL.json
[2026-01-22 06:50:43] -rw------- 1 boinc boinc       422 Jan 22 04:54 workernode_map.json
[2026-01-22 06:50:43] drwx------ 5 boinc boinc      4096 Jan 22 04:54 pilot3
[2026-01-22 06:50:43] -rw------- 1 boinc boinc 172217757 Jan 22 06:49 HITS.48298445._000069.pool.root.1
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc       529 Jan 22 06:49 boinc_task_state.xml
[2026-01-22 06:50:43] -rw------- 1 boinc boinc      1018 Jan 22 06:49 memory_monitor_summary.json
[2026-01-22 06:50:43] -rw------- 1 boinc boinc    287102 Jan 22 06:49 log.48298445._000069.job.log.tgz.1
[2026-01-22 06:50:43] -rw------- 1 boinc boinc      6291 Jan 22 06:49 heartbeat.json
[2026-01-22 06:50:43] -rw------- 1 boinc boinc        95 Jan 22 06:50 pilot_heartbeat.json
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc        27 Jan 22 06:50 wrapper_checkpoint.txt
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc      8192 Jan 22 06:50 boinc_mmap_file
[2026-01-22 06:50:43] -rw------- 1 boinc boinc      4819 Jan 22 06:50 pilotlog.txt
[2026-01-22 06:50:43] -rw------- 1 boinc boinc    993469 Jan 22 06:50 log.48298445._000069.job.log.1
[2026-01-22 06:50:43] -rw------- 1 boinc boinc       357 Jan 22 06:50 output.list
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc       620 Jan 22 06:50 runtime_log
[2026-01-22 06:50:43] -rw------- 1 boinc boinc   1300480 Jan 22 06:50 result.tar.gz
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc      8911 Jan 22 06:50 runtime_log.err
[2026-01-22 06:50:43] -rw------- 1 boinc boinc       660 Jan 22 06:50 FyiMDm3aY28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgSqKDmKmu5hm.diag
[2026-01-22 06:50:43] -rw-r--r-- 1 boinc boinc     20970 Jan 22 06:50 stderr.txt
[2026-01-22 06:50:43] HITS file was successfully produced:
[2026-01-22 06:50:43] -rw------- 1 boinc boinc 172217757 Jan 22 06:49 shared/HITS.pool.root.1
[2026-01-22 06:50:43]  *** Contents of shared directory: ***
[2026-01-22 06:50:43] total 412728
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc 248485567 Jan 22 04:54 ATLAS.root_0
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc    597775 Jan 22 04:54 input.tar.gz
[2026-01-22 06:50:43] -rw-r--r-- 2 boinc boinc     15845 Jan 22 04:54 start_atlas.sh
[2026-01-22 06:50:43] -rw------- 1 boinc boinc 172217757 Jan 22 06:49 HITS.pool.root.1
[2026-01-22 06:50:43] -rw------- 1 boinc boinc   1300480 Jan 22 06:50 result.tar.gz
06:50:45 (322190): run_atlas exited; CPU time 20004.194782
06:50:45 (322190): called boinc_finish(0)

</stderr_txt>
]]>

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