Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:18:50 (1293095): wrapper (7.7.26015): starting
04:18:50 (1293095): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 04:18:50] Arguments: --nthreads 12
[2026-01-24 04:18:50] Threads: 12
[2026-01-24 04:18:50] Checking for CVMFS
[2026-01-24 04:18:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 04:18:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 04:18:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 04:18:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 04:18:51] 2.13.3.0 3819 574 59536 155460 2 50 3308513 4096000 17328 130560 0 4222205 99.999 23095 564 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-24 04:18:51] CVMFS is ok
[2026-01-24 04:18:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 04:18:51] Checking for apptainer binary...
[2026-01-24 04:18:51] apptainer is not installed, using version from CVMFS
[2026-01-24 04:18:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 04:18:54] epyc7v12
[2026-01-24 04:18:54] apptainer works
[2026-01-24 04:18:54] Set ATHENA_PROC_NUMBER=12
[2026-01-24 04:18:54] Set ATHENA_CORE_NUMBER=12
[2026-01-24 04:18:54] Starting ATLAS job with PandaID=6969270318
[2026-01-24 04:18:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 05:44:48]  *** The last 200 lines of the pilot log: ***
[2026-01-24 05:44:48] 2026-01-24 05:43:54,565 | INFO     | stage-out finished correctly
[2026-01-24 05:44:48] 2026-01-24 05:43:54,694 | INFO     | time since job start (5064s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:43:55,355 | INFO     | number of running child processes to parent process 1304898: 1
[2026-01-24 05:44:48] 2026-01-24 05:43:55,355 | INFO     | maximum number of monitored processes: 6
[2026-01-24 05:44:48] 2026-01-24 05:43:55,985 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 05:44:48] 2026-01-24 05:43:56,716 | INFO     | time since job start (5066s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:43:57,859 | INFO     | monitor loop #337: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:43:57,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:43:58,093 | INFO     | job 6969270318 has state=finished
[2026-01-24 05:44:48] 2026-01-24 05:43:58,094 | INFO     | preparing for final server update for job 6969270318 in state='finished'
[2026-01-24 05:44:48] 2026-01-24 05:43:58,094 | INFO     | this job has now completed (state=finished)
[2026-01-24 05:44:48] 2026-01-24 05:43:58,094 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 05:44:48] 2026-01-24 05:43:58,094 | INFO     | log transfer has been attempted: DONE
[2026-01-24 05:44:48] 2026-01-24 05:43:58,095 | INFO     | job 6969270318 has finished - writing final server update
[2026-01-24 05:44:48] 2026-01-24 05:43:58,095 | INFO     | total number of processed events: 400 (read)
[2026-01-24 05:44:48] 2026-01-24 05:43:58,095 | INFO     | executing command: lscpu
[2026-01-24 05:44:48] 2026-01-24 05:43:58,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-24 05:44:48] 2026-01-24 05:43:58,724 | INFO     | time since job start (5068s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:00,365 | INFO     | monitor loop #338: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:44:00,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:44:00,734 | INFO     | time since job start (5070s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:02,741 | INFO     | time since job start (5072s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:02,868 | INFO     | monitor loop #339: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:44:02,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:44:04,746 | INFO     | time since job start (5074s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:05,372 | INFO     | monitor loop #340: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:44:05,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:44:06,751 | INFO     | time since job start (5076s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:07,875 | INFO     | monitor loop #341: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:44:07,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:44:08,757 | INFO     | time since job start (5078s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,382 | INFO     | monitor loop #342: job 0:6969270318 is in state 'finished'
[2026-01-24 05:44:48] 2026-01-24 05:44:10,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,762 | INFO     | time since job start (5080s) is within the limit (349056.0s)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,881 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-24 05:44:48] 2026-01-24 05:44:10,922 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2380.978703125
[2026-01-24 05:44:48] 2026-01-24 05:44:10,950 | INFO     | using path: /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6969270318/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,951 | INFO     | extracted standard info from prmon json
[2026-01-24 05:44:48] 2026-01-24 05:44:10,951 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 05:44:48] 2026-01-24 05:44:10,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 05:44:48] 2026-01-24 05:44:10,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 05:44:48] 2026-01-24 05:44:10,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 05:44:48] 2026-01-24 05:44:10,953 | INFO     | fitting pss+swap vs Time
[2026-01-24 05:44:48] 2026-01-24 05:44:10,954 | INFO     | sum of square deviations: 130793150.0
[2026-01-24 05:44:48] 2026-01-24 05:44:10,954 | INFO     | sum of deviations: 1222535526.0
[2026-01-24 05:44:48] 2026-01-24 05:44:10,954 | INFO     | mean x: 1769231001.0
[2026-01-24 05:44:48] 2026-01-24 05:44:10,954 | INFO     | mean y: 2709668.2133333334
[2026-01-24 05:44:48] 2026-01-24 05:44:10,955 | INFO     | intersect: -16534454184.962782
[2026-01-24 05:44:48] 2026-01-24 05:44:10,955 | INFO     | chi2: 0.05551440201620122
[2026-01-24 05:44:48] 2026-01-24 05:44:10,955 | INFO     | current memory leak: 9.35 B/s (using 75 data points, chi2=0.06)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,955 | INFO     | could have reported an average CPU frequency of 2376 MHz (6 samples)
[2026-01-24 05:44:48] 2026-01-24 05:44:10,955 | INFO     | ..............................
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . Timing measurements:
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . get job = 0 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . initial setup = 2 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . payload setup = 17 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . stage-in = 0 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . payload execution = 5002 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . stage-out = 1 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | . log creation = 0 s
[2026-01-24 05:44:48] 2026-01-24 05:44:10,956 | INFO     | ..............................
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | 
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | job summary report
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | --------------------------------------------------
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | PanDA job id: 6969270318
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | task id: 48215263
[2026-01-24 05:44:48] 2026-01-24 05:44:11,160 | INFO     | errors: (none)
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | pilot state: finished 
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | transexitcode: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | exeerrorcode: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | exeerrordiag: 
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | exitcode: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | exitmsg: OK
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | cpuconsumptiontime: 29268 s
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | nevents: 400
[2026-01-24 05:44:48] 2026-01-24 05:44:11,161 | INFO     | neventsw: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | pid: 1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | pgrp: 1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | corecount: 12
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | event service: False
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | sizes: {0: 2283796, 1: 2283995, 12: 2283995, 15: 2284285, 23: 2284313, 5023: 2310870, 5024: 2310997, 5027: 2320097, 5028: 2320153, 5043: 2320347}
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | --------------------------------------------------
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | 
[2026-01-24 05:44:48] 2026-01-24 05:44:11,162 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-24 05:44:48] 2026-01-24 05:44:11,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,221 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 05:44:48] 2026-01-24 05:44:11,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,222 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 05:44:48] 2026-01-24 05:44:11,222 | INFO     | job 6969270318 has completed (purged errors)
[2026-01-24 05:44:48] 2026-01-24 05:44:11,222 | INFO     | overall cleanup function is called
[2026-01-24 05:44:48] 2026-01-24 05:44:12,240 | INFO     | --- collectZombieJob: --- 10, [1304898]
[2026-01-24 05:44:48] 2026-01-24 05:44:12,240 | INFO     | zombie collector waiting for pid 1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:12,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 05:44:48] 2026-01-24 05:44:12,240 | INFO     | collected zombie processes
[2026-01-24 05:44:48] 2026-01-24 05:44:12,241 | INFO     | will attempt to kill all subprocesses of pid=1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:13,548 | INFO     | PID=1297613 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-24 05:44:48] 2026-01-24 05:44:13,548 | INFO     | .. there are 20 such processes running
[2026-01-24 05:44:48] 2026-01-24 05:44:13,782 | INFO     | process IDs to be killed: [1304898] (in reverse order)
[2026-01-24 05:44:48] 2026-01-24 05:44:14,221 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 05:44:48] 2026-01-24 05:44:14,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 05:44:48] 2026-01-24 05:44:14,260 | INFO     | did not find any defunct processes belonging to 1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:14,295 | INFO     | did not find any defunct processes belonging to 1304898
[2026-01-24 05:44:48] 2026-01-24 05:44:14,295 | INFO     | ready for new job
[2026-01-24 05:44:48] 2026-01-24 05:44:14,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 05:44:48] 2026-01-24 05:44:14,300 | INFO     | ***************************************
[2026-01-24 05:44:48] 2026-01-24 05:44:14,300 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-24 05:44:48] 2026-01-24 05:44:14,300 | INFO     | ***************************************
[2026-01-24 05:44:48] 2026-01-24 05:44:14,300 | INFO     | 
[2026-01-24 05:44:48] 2026-01-24 05:44:14,321 | INFO     | architecture information:
[2026-01-24 05:44:48] 2026-01-24 05:44:14,324 | INFO     | executing command: cat /etc/os-release
[2026-01-24 05:44:48] 2026-01-24 05:44:14,363 | INFO     | cat /etc/os-release:
[2026-01-24 05:44:48] NAME="CentOS Linux"
[2026-01-24 05:44:48] VERSION="7 (Core)"
[2026-01-24 05:44:48] ID="centos"
[2026-01-24 05:44:48] ID_LIKE="rhel fedora"
[2026-01-24 05:44:48] VERSION_ID="7"
[2026-01-24 05:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 05:44:48] ANSI_COLOR="0;31"
[2026-01-24 05:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 05:44:48] HOME_URL="https://www.centos.org/"
[2026-01-24 05:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 05:44:48] 
[2026-01-24 05:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 05:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 05:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 05:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 05:44:48] 
[2026-01-24 05:44:48] 2026-01-24 05:44:14,363 | INFO     | ***************************************
[2026-01-24 05:44:48] 2026-01-24 05:44:14,867 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-24 05:44:48] 2026-01-24 05:44:14,908 | INFO     | sufficient remaining disk space (249226592256 B)
[2026-01-24 05:44:48] 2026-01-24 05:44:14,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 05:44:48] 2026-01-24 05:44:14,908 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 05:44:48] 2026-01-24 05:44:14,908 | INFO     | update_server=False
[2026-01-24 05:44:48] 2026-01-24 05:44:14,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 05:44:48] 2026-01-24 05:44:15,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 05:44:48] 2026-01-24 05:44:15,329 | INFO     | all job control threads have been joined
[2026-01-24 05:44:48] 2026-01-24 05:44:15,394 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 05:44:48] 2026-01-24 05:44:15,394 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 05:44:48] 2026-01-24 05:44:15,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:44:48] 2026-01-24 05:44:15,395 | INFO     | will abort loop
[2026-01-24 05:44:48] 2026-01-24 05:44:15,614 | INFO     | all data control threads have been joined
[2026-01-24 05:44:48] 2026-01-24 05:44:15,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 05:44:48] 2026-01-24 05:44:15,915 | INFO     | [job] retrieve thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,009 | INFO     | [job] validate thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,110 | INFO     | all payload control threads have been joined
[2026-01-24 05:44:48] 2026-01-24 05:44:16,161 | INFO     | [data] copytool_in thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:44:48] 2026-01-24 05:44:16,334 | INFO     | [job] control thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,402 | INFO     | [job] job monitor thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,454 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,555 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,619 | INFO     | [data] control thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,662 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,794 | INFO     | [payload] validate_post thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:16,948 | INFO     | [payload] failed_post thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:17,031 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:17,117 | INFO     | [payload] control thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:17,182 | INFO     | [job] queue monitor thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:17,309 | INFO     | [data] copytool_out thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:19,659 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 05:44:48] 2026-01-24 05:44:38,591 | INFO     | [monitor] cgroup control has ended
[2026-01-24 05:44:48] 2026-01-24 05:44:39,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123827645691712)>', '<ExcThread(monitor, started 123827103188736)>']
[2026-01-24 05:44:48] 2026-01-24 05:44:44,657 | INFO     | all workflow threads have been joined
[2026-01-24 05:44:48] 2026-01-24 05:44:44,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 05:44:48] 2026-01-24 05:44:44,658 | INFO     | traces error code: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:44,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 05:44:48] 2026-01-24 05:44:47,117 | INFO     | PID=1297613 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 05:44:48] 2026-01-24 05:44:47,117 | INFO     | .. there are 20 such processes running
[2026-01-24 05:44:48] 2026-01-24 05:44:47,118 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 05:44:48] 2026-01-24 05:44:47,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 05:44:48] 2026-01-24 05:44:47,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 05:44:48] 2026-01-24 05:44:47,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 05:44:48] 2026-01-24 05:44:47,118 | INFO     | [monitor] control thread has ended
[2026-01-24 05:44:48] 2026-01-24 05:44:47,567 [wrapper] ==== pilot stdout END ====
[2026-01-24 05:44:48] 2026-01-24 05:44:47,572 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 05:44:48] 2026-01-24 05:44:47,579 [wrapper] pilotpid: 1297613
[2026-01-24 05:44:48] 2026-01-24 05:44:47,584 [wrapper] Pilot exit status: 0
[2026-01-24 05:44:48] 2026-01-24 05:44:47,614 [wrapper] pandaids: 6969270318
[2026-01-24 05:44:48] 2026-01-24 05:44:47,897 [wrapper] cleanup supervisor_pilot 1462564 1297614
[2026-01-24 05:44:48] 2026-01-24 05:44:47,906 [wrapper] Test setup, not cleaning
[2026-01-24 05:44:48] 2026-01-24 05:44:47,915 [wrapper] apfmon messages muted
[2026-01-24 05:44:48] 2026-01-24 05:44:47,924 [wrapper] ==== wrapper stdout END ====
[2026-01-24 05:44:48] 2026-01-24 05:44:47,932 [wrapper] ==== wrapper stderr END ====
[2026-01-24 05:44:48]  *** Error codes and diagnostics ***
[2026-01-24 05:44:48]     "exeErrorCode": 0,
[2026-01-24 05:44:48]     "exeErrorDiag": "",
[2026-01-24 05:44:48]     "pilotErrorCode": 0,
[2026-01-24 05:44:48]     "pilotErrorDiag": "",
[2026-01-24 05:44:48]  *** Listing of results directory ***
[2026-01-24 05:44:48] total 723488
[2026-01-24 05:44:48] -rwx------ 1 boinc boinc     36322 Jan 13 21:59 runpilot2-wrapper.sh
[2026-01-24 05:44:48] -rw-r--r-- 1 boinc boinc    579449 Jan 13 22:12 pilot3.tar.gz
[2026-01-24 05:44:48] -rw-r--r-- 1 boinc boinc      5112 Jan 13 22:20 queuedata.json
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc       100 Jan 24 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 05:44:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 24 04:18 run_atlas
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc       105 Jan 24 04:18 job.xml
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc 586323168 Jan 24 04:18 EVNT.32794306._000250.pool.root.1
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc     15847 Jan 24 04:18 start_atlas.sh
[2026-01-24 05:44:48] drwxrwx--x 2 boinc boinc      4096 Jan 24 04:18 shared
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc    592386 Jan 24 04:18 input.tar.gz
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc      6556 Jan 24 04:18 init_data.xml
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc         0 Jan 24 04:18 boinc_setup_complete
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc         0 Jan 24 04:18 boinc_lockfile
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc      2504 Jan 24 04:18 pandaJob.out
[2026-01-24 05:44:48] -rw------- 1 boinc boinc   1004238 Jan 24 04:19 agis_schedconf.cvmfs.json
[2026-01-24 05:44:48] -rw------- 1 boinc boinc   1516246 Jan 24 04:19 agis_ddmendpoints.agis.ALL.json
[2026-01-24 05:44:48] drwx------ 5 boinc boinc      4096 Jan 24 04:19 pilot3
[2026-01-24 05:44:48] -rw------- 1 boinc boinc 148382048 Jan 24 05:43 HITS.48215263._006238.pool.root.1
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc       531 Jan 24 05:43 boinc_task_state.xml
[2026-01-24 05:44:48] -rw------- 1 boinc boinc      1024 Jan 24 05:43 memory_monitor_summary.json
[2026-01-24 05:44:48] -rw------- 1 boinc boinc    389936 Jan 24 05:43 log.48215263._006238.job.log.tgz.1
[2026-01-24 05:44:48] -rw------- 1 boinc boinc        95 Jan 24 05:44 pilot_heartbeat.json
[2026-01-24 05:44:48] -rw------- 1 boinc boinc      7729 Jan 24 05:44 heartbeat.json
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc      8192 Jan 24 05:44 boinc_mmap_file
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc        27 Jan 24 05:44 wrapper_checkpoint.txt
[2026-01-24 05:44:48] -rw------- 1 boinc boinc       823 Jan 24 05:44 pilotlog.txt
[2026-01-24 05:44:48] -rw------- 1 boinc boinc    717984 Jan 24 05:44 log.48215263._006238.job.log.1
[2026-01-24 05:44:48] -rw------- 1 boinc boinc       357 Jan 24 05:44 output.list
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc       620 Jan 24 05:44 runtime_log
[2026-01-24 05:44:48] -rw------- 1 boinc boinc   1126400 Jan 24 05:44 result.tar.gz
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc      9167 Jan 24 05:44 runtime_log.err
[2026-01-24 05:44:48] -rw------- 1 boinc boinc       652 Jan 24 05:44 rGLMDmWb1z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm51oKDmEsD5on.diag
[2026-01-24 05:44:48] -rw-rw-r-- 1 boinc boinc     22065 Jan 24 05:44 stderr.txt
[2026-01-24 05:44:48] HITS file was successfully produced:
[2026-01-24 05:44:48] -rw------- 1 boinc boinc 148382048 Jan 24 05:43 shared/HITS.pool.root.1
[2026-01-24 05:44:48]  *** Contents of shared directory: ***
[2026-01-24 05:44:48] total 719196
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc 586323168 Jan 24 04:18 ATLAS.root_0
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc     15847 Jan 24 04:18 start_atlas.sh
[2026-01-24 05:44:48] -rw-r--r-- 2 boinc boinc    592386 Jan 24 04:18 input.tar.gz
[2026-01-24 05:44:48] -rw------- 1 boinc boinc 148382048 Jan 24 05:43 HITS.pool.root.1
[2026-01-24 05:44:48] -rw------- 1 boinc boinc   1126400 Jan 24 05:44 result.tar.gz
05:44:49 (1293095): run_atlas exited; CPU time 29557.588296
05:44:49 (1293095): called boinc_finish(0)

</stderr_txt>
]]>

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