Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:43:31 (1791908): wrapper (7.7.26015): starting
07:43:31 (1791908): wrapper: running run_atlas (--nthreads 12)
[2026-01-24 07:43:31] Arguments: --nthreads 12
[2026-01-24 07:43:31] Threads: 12
[2026-01-24 07:43:31] Checking for CVMFS
[2026-01-24 07:43:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 07:43:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 07:43:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 07:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 07:43:32] 2.13.3.0 3819 779 68268 155465 2 188 3352911 4096000 16477 130560 0 5826294 99.999 30309 631 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-24 07:43:32] CVMFS is ok
[2026-01-24 07:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 07:43:32] Checking for apptainer binary...
[2026-01-24 07:43:32] apptainer is not installed, using version from CVMFS
[2026-01-24 07:43:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 07:43:34] epyc7v12
[2026-01-24 07:43:34] apptainer works
[2026-01-24 07:43:34] Set ATHENA_PROC_NUMBER=12
[2026-01-24 07:43:34] Set ATHENA_CORE_NUMBER=12
[2026-01-24 07:43:34] Starting ATLAS job with PandaID=6977078961
[2026-01-24 07:43:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 09:36:37]  *** The last 200 lines of the pilot log: ***
[2026-01-24 09:36:37] 2026-01-24 09:35:38,628 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,628 | INFO     | log transfer has been attempted: DONE
[2026-01-24 09:36:37] 2026-01-24 09:35:38,628 | INFO     | job 6977078961 has finished - writing final server update
[2026-01-24 09:36:37] 2026-01-24 09:35:38,629 | INFO     | total number of processed events: 400 (read)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,682 | INFO     | using path: /opt/boinc/instance_homes/boinc_31422/slots/0/PanDA_Pilot-6977078961/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,683 | INFO     | extracted standard info from prmon json
[2026-01-24 09:36:37] 2026-01-24 09:35:38,683 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 09:36:37] 2026-01-24 09:35:38,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 09:36:37] 2026-01-24 09:35:38,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 09:36:37] 2026-01-24 09:35:38,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 09:36:37] 2026-01-24 09:35:38,689 | INFO     | fitting pss+swap vs Time
[2026-01-24 09:36:37] 2026-01-24 09:35:38,689 | INFO     | sum of square deviations: 401533110.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,690 | INFO     | sum of deviations: 25912535687.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,693 | INFO     | mean x: 1769243987.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,693 | INFO     | mean y: 2543475.2844036696
[2026-01-24 09:36:37] 2026-01-24 09:35:38,693 | INFO     | intersect: -114173839020.66385
[2026-01-24 09:36:37] 2026-01-24 09:35:38,693 | INFO     | chi2: 3.1528515836499222
[2026-01-24 09:36:37] 2026-01-24 09:35:38,694 | INFO     | sum of square deviations: 348769330.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,694 | INFO     | sum of deviations: 32363468016.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,694 | INFO     | mean x: 1769243834.5
[2026-01-24 09:36:37] 2026-01-24 09:35:38,695 | INFO     | mean y: 2561246.0576923075
[2026-01-24 09:36:37] 2026-01-24 09:35:38,695 | INFO     | intersect: -164171468191.52487
[2026-01-24 09:36:37] 2026-01-24 09:35:38,695 | INFO     | chi2: 2.283326189808028
[2026-01-24 09:36:37] 2026-01-24 09:35:38,701 | INFO     | current chi2=2.283326189808028 (change=27.579014450000894 %)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,701 | INFO     | sum of square deviations: 300842850.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,702 | INFO     | sum of deviations: 30528975671.000008
[2026-01-24 09:36:37] 2026-01-24 09:35:38,702 | INFO     | mean x: 1769243682.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,702 | INFO     | mean y: 2555404.1414141413
[2026-01-24 09:36:37] 2026-01-24 09:35:38,702 | INFO     | intersect: -179537019240.38968
[2026-01-24 09:36:37] 2026-01-24 09:35:38,702 | INFO     | chi2: 2.2804852727955915
[2026-01-24 09:36:37] 2026-01-24 09:35:38,703 | INFO     | current chi2=2.2804852727955915 (change=0.12442011242710167 %)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,703 | INFO     | right removable region: 98
[2026-01-24 09:36:37] 2026-01-24 09:35:38,703 | INFO     | sum of square deviations: 348769330.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,703 | INFO     | sum of deviations: 1298430933.000001
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | mean x: 1769244139.5
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | mean y: 2613842.9423076925
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | intersect: -6584092960.536567
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | chi2: 1.0753159202242917
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | current chi2=1.0753159202242917 (change=65.8938617408865 %)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,704 | INFO     | sum of square deviations: 300842850.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | sum of deviations: -6005146281.000001
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | mean x: 1769244292.0
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | mean y: 2636994.383838384
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | intersect: 35318652582.86892
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | chi2: 0.920962294883785
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | current chi2=0.920962294883785 (change=14.354258356773075 %)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,705 | INFO     | left removable region: 20
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | sum of square deviations: 147126479.5
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | sum of deviations: 226713179.50000006
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | mean x: 1769244261.5
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | mean y: 2664065.653846154
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | intersect: -2723636415.4012623
[2026-01-24 09:36:37] 2026-01-24 09:35:38,706 | INFO     | chi2: 0.0015687064654935213
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | current memory leak: 1.54 B/s (using 78 data points, chi2=0.00)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | ..............................
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | . Timing measurements:
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | . get job = 0 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | . initial setup = 19 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,707 | INFO     | . payload setup = 17 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,708 | INFO     | . stage-in = 0 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,708 | INFO     | . payload execution = 6650 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,708 | INFO     | . stage-out = 1 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,708 | INFO     | . log creation = 0 s
[2026-01-24 09:36:37] 2026-01-24 09:35:38,708 | INFO     | ..............................
[2026-01-24 09:36:37] 2026-01-24 09:35:39,070 | INFO     | 
[2026-01-24 09:36:37] 2026-01-24 09:35:39,070 | INFO     | job summary report
[2026-01-24 09:36:37] 2026-01-24 09:35:39,070 | INFO     | --------------------------------------------------
[2026-01-24 09:36:37] 2026-01-24 09:35:39,070 | INFO     | PanDA job id: 6977078961
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | task id: 48301086
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | errors: (none)
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | pilot state: finished 
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | transexitcode: 0
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | exeerrorcode: 0
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | exeerrordiag: 
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | exitcode: 0
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | exitmsg: OK
[2026-01-24 09:36:37] 2026-01-24 09:35:39,071 | INFO     | cpuconsumptiontime: 42063 s
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | nevents: 400
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | neventsw: 0
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | pid: 1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | pgrp: 1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | corecount: 12
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | event service: False
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | sizes: {0: 2283826, 1: 2284287, 2: 2284315, 6671: 2311648, 6673: 2320692, 6676: 2321070}
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | --------------------------------------------------
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | 
[2026-01-24 09:36:37] 2026-01-24 09:35:39,072 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-24 09:36:37] 2026-01-24 09:35:39,129 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,129 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,129 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,129 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,131 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 09:36:37] 2026-01-24 09:35:39,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,136 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 09:36:37] 2026-01-24 09:35:39,136 | INFO     | job 6977078961 has completed (purged errors)
[2026-01-24 09:36:37] 2026-01-24 09:35:39,136 | INFO     | overall cleanup function is called
[2026-01-24 09:36:37] 2026-01-24 09:35:40,150 | INFO     | --- collectZombieJob: --- 10, [1801308]
[2026-01-24 09:36:37] 2026-01-24 09:35:40,150 | INFO     | zombie collector waiting for pid 1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:40,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 09:36:37] 2026-01-24 09:35:40,150 | INFO     | collected zombie processes
[2026-01-24 09:36:37] 2026-01-24 09:35:40,151 | INFO     | will attempt to kill all subprocesses of pid=1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:41,494 | INFO     | process IDs to be killed: [1801308] (in reverse order)
[2026-01-24 09:36:37] 2026-01-24 09:35:41,899 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 09:36:37] 2026-01-24 09:35:41,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 09:36:37] 2026-01-24 09:35:41,935 | INFO     | did not find any defunct processes belonging to 1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:41,970 | INFO     | did not find any defunct processes belonging to 1801308
[2026-01-24 09:36:37] 2026-01-24 09:35:41,972 | INFO     | ready for new job
[2026-01-24 09:36:37] 2026-01-24 09:35:41,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 09:36:37] 2026-01-24 09:35:41,978 | INFO     | **************************************
[2026-01-24 09:36:37] 2026-01-24 09:35:41,978 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 09:36:37] 2026-01-24 09:35:41,978 | INFO     | **************************************
[2026-01-24 09:36:37] 2026-01-24 09:35:41,978 | INFO     | 
[2026-01-24 09:36:37] 2026-01-24 09:35:41,999 | INFO     | architecture information:
[2026-01-24 09:36:37] 2026-01-24 09:35:42,000 | INFO     | executing command: cat /etc/os-release
[2026-01-24 09:36:37] 2026-01-24 09:35:42,041 | INFO     | cat /etc/os-release:
[2026-01-24 09:36:37] NAME="CentOS Linux"
[2026-01-24 09:36:37] VERSION="7 (Core)"
[2026-01-24 09:36:37] ID="centos"
[2026-01-24 09:36:37] ID_LIKE="rhel fedora"
[2026-01-24 09:36:37] VERSION_ID="7"
[2026-01-24 09:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 09:36:37] ANSI_COLOR="0;31"
[2026-01-24 09:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 09:36:37] HOME_URL="https://www.centos.org/"
[2026-01-24 09:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 09:36:37] 
[2026-01-24 09:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 09:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 09:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 09:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 09:36:37] 
[2026-01-24 09:36:37] 2026-01-24 09:35:42,042 | INFO     | **************************************
[2026-01-24 09:36:37] 2026-01-24 09:35:42,547 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/0
[2026-01-24 09:36:37] 2026-01-24 09:35:42,588 | INFO     | sufficient remaining disk space (251392950272 B)
[2026-01-24 09:36:37] 2026-01-24 09:35:42,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 09:36:37] 2026-01-24 09:35:42,590 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 09:36:37] 2026-01-24 09:35:42,590 | INFO     | update_server=False
[2026-01-24 09:36:37] 2026-01-24 09:35:42,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 09:36:37] 2026-01-24 09:35:42,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 09:36:37] 2026-01-24 09:35:43,392 | INFO     | all job control threads have been joined
[2026-01-24 09:36:37] 2026-01-24 09:35:43,393 | INFO     | all data control threads have been joined
[2026-01-24 09:36:37] 2026-01-24 09:35:43,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 09:36:37] 2026-01-24 09:35:43,440 | INFO     | aborting loop
[2026-01-24 09:36:37] 2026-01-24 09:35:43,596 | INFO     | [job] retrieve thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:43,743 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:43,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 09:36:37] 2026-01-24 09:35:43,994 | INFO     | all payload control threads have been joined
[2026-01-24 09:36:37] 2026-01-24 09:35:44,248 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,266 | INFO     | [data] copytool_in thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,318 | INFO     | [payload] failed_post thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,397 | INFO     | [job] control thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,398 | INFO     | [data] control thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,445 | INFO     | [job] job monitor thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,523 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,596 | INFO     | [data] copytool_out thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 09:36:37] 2026-01-24 09:35:44,728 | INFO     | [job] validate thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,855 | INFO     | [job] queue monitor thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,949 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:44,999 | INFO     | [payload] control thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:45,167 | INFO     | [payload] validate_post thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:35:48,641 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 09:36:37] 2026-01-24 09:36:12,619 | INFO     | PID=1796298 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-24 09:36:37] 2026-01-24 09:36:12,619 | INFO     | .. there are 20 such processes running
[2026-01-24 09:36:37] 2026-01-24 09:36:12,621 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 09:36:37] 2026-01-24 09:36:12,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 09:36:37] 2026-01-24 09:36:12,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 09:36:37] 2026-01-24 09:36:31,415 | INFO     | [monitor] cgroup control has ended
[2026-01-24 09:36:37] 2026-01-24 09:36:32,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658021226304)>', '<ExcThread(monitor, started 140657351976704)>']
[2026-01-24 09:36:37] 2026-01-24 09:36:32,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 09:36:37] 2026-01-24 09:36:32,726 | INFO     | [monitor] control thread has ended
[2026-01-24 09:36:37] 2026-01-24 09:36:37,122 | INFO     | all workflow threads have been joined
[2026-01-24 09:36:37] 2026-01-24 09:36:37,122 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 09:36:37] 2026-01-24 09:36:37,122 | INFO     | traces error code: 0
[2026-01-24 09:36:37] 2026-01-24 09:36:37,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 09:36:37] 2026-01-24 09:36:37,323 [wrapper] ==== pilot stdout END ====
[2026-01-24 09:36:37] 2026-01-24 09:36:37,330 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 09:36:37] 2026-01-24 09:36:37,335 [wrapper] pilotpid: 1796298
[2026-01-24 09:36:37] 2026-01-24 09:36:37,344 [wrapper] Pilot exit status: 0
[2026-01-24 09:36:37] 2026-01-24 09:36:37,374 [wrapper] pandaids: 6977078961
[2026-01-24 09:36:37] 2026-01-24 09:36:37,549 [wrapper] cleanup supervisor_pilot 2054358 1796299
[2026-01-24 09:36:37] 2026-01-24 09:36:37,556 [wrapper] Test setup, not cleaning
[2026-01-24 09:36:37] 2026-01-24 09:36:37,564 [wrapper] apfmon messages muted
[2026-01-24 09:36:37] 2026-01-24 09:36:37,575 [wrapper] ==== wrapper stdout END ====
[2026-01-24 09:36:37] 2026-01-24 09:36:37,582 [wrapper] ==== wrapper stderr END ====
[2026-01-24 09:36:37]  *** Error codes and diagnostics ***
[2026-01-24 09:36:37]     "exeErrorCode": 0,
[2026-01-24 09:36:37]     "exeErrorDiag": "",
[2026-01-24 09:36:37]     "pilotErrorCode": 0,
[2026-01-24 09:36:37]     "pilotErrorDiag": "",
[2026-01-24 09:36:37]  *** Listing of results directory ***
[2026-01-24 09:36:37] total 666344
[2026-01-24 09:36:37] -rw-r--r-- 1 boinc boinc    584422 Jan 21 01:23 pilot3.tar.gz
[2026-01-24 09:36:37] -rwx------ 1 boinc boinc     36322 Jan 21 01:25 runpilot2-wrapper.sh
[2026-01-24 09:36:37] -rw-r--r-- 1 boinc boinc      5111 Jan 21 01:26 queuedata.json
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc       100 Jan 24 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 09:36:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 24 07:43 run_atlas
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc       105 Jan 24 07:43 job.xml
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc 499254977 Jan 24 07:43 EVNT.48301084._000027.pool.root.1
[2026-01-24 09:36:37] drwxrwx--x 2 boinc boinc      4096 Jan 24 07:43 shared
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc    597749 Jan 24 07:43 input.tar.gz
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc     15845 Jan 24 07:43 start_atlas.sh
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc      6556 Jan 24 07:43 init_data.xml
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc         0 Jan 24 07:43 boinc_setup_complete
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc         0 Jan 24 07:43 boinc_lockfile
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc      2519 Jan 24 07:43 pandaJob.out
[2026-01-24 09:36:37] -rw------- 1 boinc boinc   1004238 Jan 24 07:44 agis_schedconf.cvmfs.json
[2026-01-24 09:36:37] -rw------- 1 boinc boinc   1516246 Jan 24 07:44 agis_ddmendpoints.agis.ALL.json
[2026-01-24 09:36:37] -rw------- 1 boinc boinc       419 Jan 24 07:44 workernode_map.json
[2026-01-24 09:36:37] drwx------ 5 boinc boinc      4096 Jan 24 07:44 pilot3
[2026-01-24 09:36:37] -rw------- 1 boinc boinc 176449850 Jan 24 09:34 HITS.48301086._001312.pool.root.1
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc       530 Jan 24 09:34 boinc_task_state.xml
[2026-01-24 09:36:37] -rw------- 1 boinc boinc      1023 Jan 24 09:35 memory_monitor_summary.json
[2026-01-24 09:36:37] -rw------- 1 boinc boinc    412297 Jan 24 09:35 log.48301086._001312.job.log.tgz.1
[2026-01-24 09:36:37] -rw------- 1 boinc boinc      6271 Jan 24 09:35 heartbeat.json
[2026-01-24 09:36:37] -rw------- 1 boinc boinc        95 Jan 24 09:36 pilot_heartbeat.json
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc        27 Jan 24 09:36 wrapper_checkpoint.txt
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc      8192 Jan 24 09:36 boinc_mmap_file
[2026-01-24 09:36:37] -rw------- 1 boinc boinc      4845 Jan 24 09:36 pilotlog.txt
[2026-01-24 09:36:37] -rw------- 1 boinc boinc    931453 Jan 24 09:36 log.48301086._001312.job.log.1
[2026-01-24 09:36:37] -rw------- 1 boinc boinc       357 Jan 24 09:36 output.list
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc       620 Jan 24 09:36 runtime_log
[2026-01-24 09:36:37] -rw------- 1 boinc boinc   1361920 Jan 24 09:36 result.tar.gz
[2026-01-24 09:36:37] -rw------- 1 boinc boinc       651 Jan 24 09:36 zHRODmT9b28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmrqKDmT0ZIdm.diag
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc      9166 Jan 24 09:36 runtime_log.err
[2026-01-24 09:36:37] -rw-rw-r-- 1 boinc boinc     20837 Jan 24 09:36 stderr.txt
[2026-01-24 09:36:37] HITS file was successfully produced:
[2026-01-24 09:36:37] -rw------- 1 boinc boinc 176449850 Jan 24 09:34 shared/HITS.pool.root.1
[2026-01-24 09:36:37]  *** Contents of shared directory: ***
[2026-01-24 09:36:37] total 661812
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc 499254977 Jan 24 07:43 ATLAS.root_0
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc    597749 Jan 24 07:43 input.tar.gz
[2026-01-24 09:36:37] -rw-r--r-- 2 boinc boinc     15845 Jan 24 07:43 start_atlas.sh
[2026-01-24 09:36:37] -rw------- 1 boinc boinc 176449850 Jan 24 09:34 HITS.pool.root.1
[2026-01-24 09:36:37] -rw------- 1 boinc boinc   1361920 Jan 24 09:36 result.tar.gz
09:36:39 (1791908): run_atlas exited; CPU time 42458.518684
09:36:39 (1791908): called boinc_finish(0)

</stderr_txt>
]]>

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