Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-21 16:11:55 (17312): vboxwrapper version 26210
2026-01-21 16:11:55 (17312): BOINC client version: 8.2.8
2026-01-21 16:11:55 (17312): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-21 16:11:55 (17312): Successfully copied 'init_data.xml' to the shared directory.
2026-01-21 16:11:56 (17312): Create VM. (boinc_7823f05a2b6088e7, slot#4)
2026-01-21 16:11:56 (17312): Setting Memory Size for VM. (4400MB)
2026-01-21 16:11:56 (17312): Setting CPU Count for VM. (4)
2026-01-21 16:11:57 (17312): Setting Chipset Options for VM.
2026-01-21 16:11:57 (17312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-21 16:11:57 (17312): Setting Boot Options for VM.
2026-01-21 16:11:58 (17312): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-21 16:11:58 (17312): Enabling VM Network Access.
2026-01-21 16:11:58 (17312): Disabling USB Support for VM.
2026-01-21 16:11:59 (17312): Disabling COM Port Support for VM.
2026-01-21 16:11:59 (17312): Disabling LPT Port Support for VM.
2026-01-21 16:11:59 (17312): Disabling Audio Support for VM.
2026-01-21 16:11:59 (17312): Disabling Clipboard Support for VM.
2026-01-21 16:12:00 (17312): Disabling Drag and Drop Support for VM.
2026-01-21 16:12:00 (17312): Adding storage controller(s) to VM.
2026-01-21 16:12:00 (17312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-21 16:12:01 (17312): Adding VirtualBox Guest Additions to VM.
2026-01-21 16:12:01 (17312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-21 16:12:01 (17312): forwarding host port 64511 to guest port 80
2026-01-21 16:12:01 (17312): Enabling remote desktop for VM.
2026-01-21 16:12:02 (17312): Required extension pack not installed, remote desktop not enabled.
2026-01-21 16:12:02 (17312): Enabling shared directory for VM.
2026-01-21 16:12:02 (17312): Starting VM using VBoxManage interface. (boinc_7823f05a2b6088e7, slot#4)
2026-01-21 16:12:07 (17312): Successfully started VM. (PID = '9180')
2026-01-21 16:12:07 (17312): Reporting VM Process ID to BOINC.
2026-01-21 16:12:07 (17312): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-21 16:12:07 (17312): Guest Log: CPUID EDX: 0x178bfbff
2026-01-21 16:12:07 (17312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-21 16:12:07 (17312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-21 16:12:07 (17312): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-21 16:12:07 (17312): Detected: Web Application Enabled (http://localhost:64511)
2026-01-21 16:12:07 (17312): Preference change detected
2026-01-21 16:12:07 (17312): Setting CPU throttle for VM. (90%)
2026-01-21 16:12:07 (17312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-21 16:12:09 (17312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-21 16:12:09 (17312): Guest Log: BIOS: Booting from Hard Disk...
2026-01-21 16:12:12 (17312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-21 16:12:12 (17312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-21 16:12:12 (17312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-21 16:12:17 (17312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-21 16:12:17 (17312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-21 16:12:23 (17312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000091 main     Log opened 2026-01-21T16:12:21.826953000Z
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000173 main     OS Product: Linux
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000219 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000240 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000241 main     Process ID: 1306
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.000241 main     Package type: LINUX_64BITS_GENERIC
2026-01-21 16:12:23 (17312): Guest Log: 00:00:00.008505 main     5.2.32 r132073 started. Verbose level = 0
2026-01-21 16:12:23 (17312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-21 16:12:23 (17312): Guest Log: [INFO] Mounting shared directory
2026-01-21 16:12:23 (17312): Guest Log: [INFO] Checking for init_data.xml
2026-01-21 16:12:26 (17312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-21 16:12:26 (17312): Guest Log: [INFO] Detected branch: prod
2026-01-21 16:12:26 (17312): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-21 16:12:26 (17312): Guest Log: Copying input files
2026-01-21 16:12:28 (17312): Guest Log: Copied input files into RunAtlas.
2026-01-21 16:12:28 (17312): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-21 16:12:28 (17312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-21 16:12:28 (17312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-21 16:12:28 (17312): Guest Log: Further information can be found at the LHC@home message board.
2026-01-21 16:12:33 (17312): Guest Log: 00:00:10.034252 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 946 300 000ns (GuestNow=1 769 029 952 798 191 000 ns GuestLast=1 769 011 941 851 891 000 ns fSetTimeLastLoop=true )
2026-01-21 16:12:38 (17312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-21 16:12:38 (17312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-21 16:12:38 (17312): Guest Log: 2.6.3.0 1580 0 30160 155392 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-21 16:12:39 (17312): Guest Log: copied the webapp to /var/www
2026-01-21 16:12:39 (17312): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-21 16:12:39 (17312): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-21 16:12:39 (17312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-21 16:12:39 (17312): Guest Log:  *** Starting ATLAS job. (PandaID=6977301105 taskID=48301086) ***
2026-01-21 17:52:11 (17312): Status Report: Elapsed Time: '6000.000000'
2026-01-21 17:52:11 (17312): Status Report: CPU Time: '16381.640625'
2026-01-21 19:32:15 (17312): Status Report: Elapsed Time: '12000.000000'
2026-01-21 19:32:15 (17312): Status Report: CPU Time: '33442.828125'
2026-01-21 19:41:20 (17312): Guest Log:  *** Job finished ***
2026-01-21 19:41:20 (17312): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:00,293 | INFO     | all workflow threads have been joined
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:00,293 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:00,294 | INFO     | traces error code: 0
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:00,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | INFO     | PID=5985 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | INFO     | found 0 job(s) in 20 queues
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,301 | INFO     | [monitor] control thread has ended
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,425 [wrapper] ==== pilot stdout END ====
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,448 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,466 [wrapper] pilotpid: 5985
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,476 [wrapper] Pilot exit status: 0
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,578 [wrapper] pandaids: 6977301105
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,664 [wrapper] cleanup supervisor_pilot 27577 5986
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,692 [wrapper] Test setup, not cleaning
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,703 [wrapper] apfmon messages muted
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,728 [wrapper] ==== wrapper stdout END ====
2026-01-21 19:41:20 (17312): Guest Log: 2026-01-22 00:41:18,742 [wrapper] ==== wrapper stderr END ====
2026-01-21 19:41:20 (17312): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 19:41:20 (17312): Guest Log:     "exeErrorCode": 0,
2026-01-21 19:41:20 (17312): Guest Log:     "exeErrorDiag": "",
2026-01-21 19:41:20 (17312): Guest Log:     "pilotErrorCode": 0,
2026-01-21 19:41:20 (17312): Guest Log:     "pilotErrorDiag": "",
2026-01-21 19:41:20 (17312): Guest Log:  *** Listing of results directory ***
2026-01-21 19:41:20 (17312): Guest Log: total 185048
2026-01-21 19:41:20 (17312): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 21 06:41 pilot3.tar.gz
2026-01-21 19:41:20 (17312): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 21 06:45 runpilot2-wrapper.sh
2026-01-21 19:41:20 (17312): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 21 06:49 queuedata.json
2026-01-21 19:41:20 (17312): Guest Log: -rwxr-xr-x. 1 atlas atlas     15024 Jan 21 21:12 init_data.xml
2026-01-21 19:41:20 (17312): Guest Log: -rwxr-xr-x. 1 atlas atlas    597744 Jan 21 21:12 input.tar.gz
2026-01-21 19:41:20 (17312): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 21 21:12 start_atlas.sh
2026-01-21 19:41:20 (17312): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 21 21:12 EVNT.48301084._000054.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 19:41:20 (17312): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 21 21:12 pandaJob.out
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas   1002771 Jan 21 21:13 agis_schedconf.cvmfs.json
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas       423 Jan 21 21:13 workernode_map.json
2026-01-21 19:41:20 (17312): Guest Log: drwx------. 5 atlas atlas      4096 Jan 21 21:13 pilot3
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas 181360927 Jan 22 00:39 HITS.48301086._002681.pool.root.1
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 22 00:40 memory_monitor_summary.json
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas        95 Jan 22 00:40 pilot_heartbeat.json
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 22 00:40 agis_ddmendpoints.agis.ALL.json
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas    397149 Jan 22 00:40 log.48301086._002681.job.log.tgz.1
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas      6361 Jan 22 00:40 heartbeat.json
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas       744 Jan 22 00:41 pilotlog.txt
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas   1733790 Jan 22 00:41 log.48301086._002681.job.log.1
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas       357 Jan 22 00:41 output.list
2026-01-21 19:41:20 (17312): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 22 00:41 runtime_log
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas   2150400 Jan 22 00:41 result.tar.gz
2026-01-21 19:41:20 (17312): Guest Log: -rw-r--r--. 1 atlas atlas      8719 Jan 22 00:41 runtime_log.err
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas       648 Jan 22 00:41 bVmLDmE9g28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdGyKDmrkoCmn.diag
2026-01-21 19:41:20 (17312): Guest Log: Looking for outputfile HITS.48301086._002681.pool.root.1
2026-01-21 19:41:20 (17312): Guest Log: HITS file was successfully produced
2026-01-21 19:41:20 (17312): Guest Log: -rw-------. 1 atlas atlas 181360927 Jan 22 00:39 /home/atlas/RunAtlas/HITS.48301086._002681.pool.root.1
2026-01-21 19:41:21 (17312): Guest Log: Successfully finished the ATLAS job!
2026-01-21 19:41:21 (17312): Guest Log: Copying the results back to the shared directory!
2026-01-21 19:41:21 (17312): Guest Log:  *** Contents of shared directory: ***
2026-01-21 19:41:21 (17312): Guest Log: total 661804
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root 493542257 Jan 21 21:11 ATLAS.root_0
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root 181360927 Jan 22 00:41 HITS.pool.root.1
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root     15024 Jan 21 21:11 init_data.xml
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root    597744 Jan 21 21:11 input.tar.gz
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root   2150400 Jan 22 00:41 result.tar.gz
2026-01-21 19:41:21 (17312): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 21:11 start_atlas.sh
2026-01-21 19:41:21 (17312): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 19:41:21 (17312): VM Completion File Detected.
2026-01-21 19:41:21 (17312): Powering off VM.
2026-01-21 19:41:22 (17312): Successfully stopped VM.
2026-01-21 19:41:22 (17312): Deregistering VM. (boinc_7823f05a2b6088e7, slot#4)
2026-01-21 19:41:22 (17312): Removing network bandwidth throttle group from VM.
2026-01-21 19:41:22 (17312): Removing VM from VirtualBox.
2026-01-21 19:41:28 (17312): called boinc_finish(0)

</stderr_txt>
]]>

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