Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:19 (905992): wrapper (7.7.26015): starting
03:00:19 (905992): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 03:00:19] Arguments: --nthreads 3
[2026-01-22 03:00:19] Threads: 3
[2026-01-22 03:00:19] Checking for CVMFS
[2026-01-22 03:00:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 03:00:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 03:00:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 03:00:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 03:00:20] 2.9.2.0 585373 2080 83644 155392 2 188 22335428 36864001 0 130560 0 953938 99.987 55978 13385 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 03:00:20] CVMFS is ok
[2026-01-22 03:00:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 03:00:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 03:00:20] Further information can be found at the LHC@home message board.
[2026-01-22 03:00:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 03:00:20] Checking for apptainer binary...
[2026-01-22 03:00:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 03:00:20] Running /usr/bin/apptainer --version
[2026-01-22 03:00:20] apptainer version 1.4.1-1.1
[2026-01-22 03:00:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 03:00:20] thA337a
[2026-01-22 03:00:20] apptainer works
[2026-01-22 03:00:20] Set ATHENA_PROC_NUMBER=3
[2026-01-22 03:00:20] Set ATHENA_CORE_NUMBER=3
[2026-01-22 03:00:20] Starting ATLAS job with PandaID=6976975711
[2026-01-22 03:00:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 04:13:41]  *** The last 200 lines of the pilot log: ***
[2026-01-22 04:13:41] 2026-01-22 03:12:51,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 04:13:41] 2026-01-22 03:12:51,458 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 04:13:41] 2026-01-22 03:12:51,458 | INFO     | will abort loop
[2026-01-22 04:13:41] 2026-01-22 03:12:51,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 04:13:41] 2026-01-22 03:12:51,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 04:13:41] 2026-01-22 03:12:51,613 | INFO     | all job control threads have been joined
[2026-01-22 04:13:41] 2026-01-22 03:12:51,985 | INFO     | all payload control threads have been joined
[2026-01-22 04:13:41] 2026-01-22 03:12:52,009 | INFO     | all data control threads have been joined
[2026-01-22 04:13:41] 2026-01-22 03:12:52,463 | INFO     | [job] retrieve thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:52,463 | INFO     | [job] queue monitor thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:52,463 | INFO     | [job] job monitor thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:52,570 | INFO     | [payload] validate_post thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:52,618 | INFO     | [job] control thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:52,991 | INFO     | [payload] control thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,015 | INFO     | [data] control thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,307 | INFO     | [payload] failed_post thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,464 | INFO     | [data] copytool_out thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,597 | INFO     | [job] validate thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,645 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,661 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,661 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:53,837 | INFO     | [data] copytool_in thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:12:54,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 04:13:41] 2026-01-22 03:12:58,358 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:13:02,484 | INFO     | job.realtimelogging is not enabled
[2026-01-22 04:13:41] 2026-01-22 03:13:03,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 04:13:41] 2026-01-22 03:13:35,229 | INFO     | [monitor] cgroup control has ended
[2026-01-22 04:13:41] 2026-01-22 03:13:35,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687113099072)>', '<ExcThread(monitor, started 140686830876416)>']
[2026-01-22 04:13:41] 2026-01-22 03:13:36,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 04:13:41] 2026-01-22 03:13:36,693 | INFO     | [monitor] control thread has ended
[2026-01-22 04:13:41] 2026-01-22 03:13:40,917 | INFO     | all workflow threads have been joined
[2026-01-22 04:13:41] 2026-01-22 03:13:40,917 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 04:13:41] 2026-01-22 03:13:40,917 | INFO     | traces error code: 0
[2026-01-22 04:13:41] 2026-01-22 03:13:40,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 04:13:41] 2026-01-22 03:13:40,966 [wrapper] ==== pilot stdout END ====
[2026-01-22 04:13:41] 2026-01-22 03:13:40,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 04:13:41] 2026-01-22 03:13:40,970 [wrapper] pilotpid: 910030
[2026-01-22 04:13:41] 2026-01-22 03:13:40,972 [wrapper] Pilot exit status: 0
[2026-01-22 04:13:41] 2026-01-22 03:13:40,980 [wrapper] pandaids: 6976975711
[2026-01-22 04:13:41] 2026-01-22 03:13:40,996 [wrapper] cleanup supervisor_pilot  919357 910031
[2026-01-22 04:13:41] 2026-01-22 03:13:40,998 [wrapper] Test setup, not cleaning
[2026-01-22 04:13:41] 2026-01-22 03:13:41,001 [wrapper] apfmon messages muted
[2026-01-22 04:13:41] 2026-01-22 03:13:41,003 [wrapper] ==== wrapper stdout END ====
[2026-01-22 04:13:41] 2026-01-22 03:13:41,005 [wrapper] ==== wrapper stderr END ====
[2026-01-22 04:13:41]  *** Error codes and diagnostics ***
[2026-01-22 04:13:41]     "exeErrorCode": 0,
[2026-01-22 04:13:41]     "exeErrorDiag": "",
[2026-01-22 04:13:41]     "pilotErrorCode": 0,
[2026-01-22 04:13:41]     "pilotErrorDiag": "",
[2026-01-22 04:13:41]  *** Listing of results directory ***
[2026-01-22 04:13:41] total 420528
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc    584422 Jan 20 23:53 pilot3.tar.gz
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      5111 Jan 20 23:57 queuedata.json
[2026-01-22 04:13:41] -rwx------ 1 boinc boinc     36322 Jan 20 23:57 runpilot2-wrapper.sh
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc       100 Jan 22 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 04:13:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 03:00 run_atlas
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc       105 Jan 22 03:00 job.xml
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc 259942980 Jan 22 03:00 EVNT.48298318._000007.pool.root.1
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc    597788 Jan 22 03:00 input.tar.gz
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc     15845 Jan 22 03:00 start_atlas.sh
[2026-01-22 04:13:41] drwxrwx--x 2 boinc boinc      4096 Jan 22 03:00 shared
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc         0 Jan 22 03:00 boinc_setup_complete
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      6446 Jan 22 03:00 init_data.xml
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc         0 Jan 22 03:00 boinc_lockfile
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      2640 Jan 22 03:00 pandaJob.out
[2026-01-22 04:13:41] -rw------- 1 boinc boinc   1002771 Jan 22 03:00 agis_schedconf.cvmfs.json
[2026-01-22 04:13:41] -rw------- 1 boinc boinc   1516246 Jan 22 03:00 agis_ddmendpoints.agis.ALL.json
[2026-01-22 04:13:41] -rw------- 1 boinc boinc       424 Jan 22 03:00 workernode_map.json
[2026-01-22 04:13:41] drwx------ 5 boinc boinc      4096 Jan 22 03:00 pilot3
[2026-01-22 04:13:41] -rw------- 1 boinc boinc 165007986 Jan 22 04:12 HITS.48298321._000405.pool.root.1
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc       529 Jan 22 04:12 boinc_task_state.xml
[2026-01-22 04:13:41] -rw------- 1 boinc boinc      1011 Jan 22 04:12 memory_monitor_summary.json
[2026-01-22 04:13:41] -rw------- 1 boinc boinc    232605 Jan 22 04:12 log.48298321._000405.job.log.tgz.1
[2026-01-22 04:13:41] -rw------- 1 boinc boinc        95 Jan 22 04:12 pilot_heartbeat.json
[2026-01-22 04:13:41] -rw------- 1 boinc boinc      6281 Jan 22 04:12 heartbeat.json
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      8192 Jan 22 04:13 boinc_mmap_file
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc        27 Jan 22 04:13 wrapper_checkpoint.txt
[2026-01-22 04:13:41] -rw------- 1 boinc boinc      5146 Jan 22 04:13 pilotlog.txt
[2026-01-22 04:13:41] -rw------- 1 boinc boinc    642400 Jan 22 04:13 log.48298321._000405.job.log.1
[2026-01-22 04:13:41] -rw------- 1 boinc boinc       357 Jan 22 04:13 output.list
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc       620 Jan 22 04:13 runtime_log
[2026-01-22 04:13:41] -rw------- 1 boinc boinc    890880 Jan 22 04:13 result.tar.gz
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      8901 Jan 22 04:13 runtime_log.err
[2026-01-22 04:13:41] -rw------- 1 boinc boinc       658 Jan 22 04:13 EmINDmCqZ28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQAxKDmJfjNan.diag
[2026-01-22 04:13:41] -rw-r--r-- 1 boinc boinc      6808 Jan 22 04:13 stderr.txt
[2026-01-22 04:13:41] HITS file was successfully produced:
[2026-01-22 04:13:41] -rw------- 1 boinc boinc 165007986 Jan 22 04:12 shared/HITS.pool.root.1
[2026-01-22 04:13:41]  *** Contents of shared directory: ***
[2026-01-22 04:13:41] total 416476
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc 259942980 Jan 22 03:00 ATLAS.root_0
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc    597788 Jan 22 03:00 input.tar.gz
[2026-01-22 04:13:41] -rw-r--r-- 2 boinc boinc     15845 Jan 22 03:00 start_atlas.sh
[2026-01-22 04:13:41] -rw------- 1 boinc boinc 165007986 Jan 22 04:12 HITS.pool.root.1
[2026-01-22 04:13:41] -rw------- 1 boinc boinc    890880 Jan 22 04:13 result.tar.gz
04:13:42 (905992): run_atlas exited; CPU time 12383.290780
04:13:42 (905992): called boinc_finish(0)

</stderr_txt>
]]>

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