Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:02 (547145): wrapper (7.7.26015): starting
12:49:02 (547145): wrapper: running run_atlas (--nthreads 3)
[2026-01-22 12:49:02] Arguments: --nthreads 3
[2026-01-22 12:49:02] Threads: 3
[2026-01-22 12:49:02] Checking for CVMFS
[2026-01-22 12:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 12:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 12:49:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 12:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 12:49:02] 2.9.2.0 531844 232 49528 155392 3 88 17159263 36864000 0 130560 0 62826 100.000 34 127 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-22 12:49:02] CVMFS is ok
[2026-01-22 12:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 12:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 12:49:02] Further information can be found at the LHC@home message board.
[2026-01-22 12:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 12:49:02] Checking for apptainer binary...
[2026-01-22 12:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 12:49:02] Running /usr/bin/apptainer --version
[2026-01-22 12:49:02] apptainer version 1.4.1-1.1
[2026-01-22 12:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 12:49:02] atlasA115
[2026-01-22 12:49:02] apptainer works
[2026-01-22 12:49:02] Set ATHENA_PROC_NUMBER=3
[2026-01-22 12:49:02] Set ATHENA_CORE_NUMBER=3
[2026-01-22 12:49:02] Starting ATLAS job with PandaID=6977055580
[2026-01-22 12:49:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 14:07:29]  *** The last 200 lines of the pilot log: ***
[2026-01-22 14:07:29]  filesize=237094
[2026-01-22 14:07:29]  filetype=log
[2026-01-22 14:07:29]  guid=05632eeb-e2db-4157-a89a-e295087266fb
[2026-01-22 14:07:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 14:07:29]  is_altstaged=None
[2026-01-22 14:07:29]  is_tar=False
[2026-01-22 14:07:29]  lfn=log.48299557._000028.job.log.tgz.1
[2026-01-22 14:07:29]  mtime=0
[2026-01-22 14:07:29]  protocol_id=None
[2026-01-22 14:07:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 14:07:29]  replicas=None
[2026-01-22 14:07:29]  scope=mc23_13p6TeV
[2026-01-22 14:07:29]  status=None
[2026-01-22 14:07:29]  status_code=0
[2026-01-22 14:07:29]  storage_token=
[2026-01-22 14:07:29]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6977055580/log.48299557._000028.job.log.tgz.1
[2026-01-22 14:07:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/35/log.48299557._000028.job.log.tgz.1
[2026-01-22 14:07:29]  workdir=None
[2026-01-22 14:07:29] ]
[2026-01-22 14:07:29] 2026-01-22 13:06:54,870 | INFO     | transferring file log.48299557._000028.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6977055580/log.48299557._000028.job.log.tgz.1 to /local/data/boinc/
[2026-01-22 14:07:29] 2026-01-22 13:06:54,870 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6977055580/log.48299557._000028.job.log.tgz.1 /local/data/boinc/slots/0/log.48299557._0000
[2026-01-22 14:07:29] 2026-01-22 13:06:54,883 | INFO     | adding to output.list: log.48299557._000028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/35/log.48299557._000028.job.log.tg
[2026-01-22 14:07:29] 2026-01-22 13:06:54,883 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 14:07:29] 2026-01-22 13:06:54,883 | INFO     | summary of transferred files:
[2026-01-22 14:07:29] 2026-01-22 13:06:54,883 | INFO     |  -- lfn=log.48299557._000028.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 14:07:29] 2026-01-22 13:06:54,883 | INFO     | stage-out finished correctly
[2026-01-22 14:07:29] 2026-01-22 13:06:55,749 | INFO     | monitor loop #361: job 0:6977055580 is in state 'finished'
[2026-01-22 14:07:29] 2026-01-22 13:06:55,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 14:07:29] 2026-01-22 13:06:56,131 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 14:07:29] 2026-01-22 13:06:56,652 | INFO     | time since job start (4663s) is within the limit (349056.0s)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,709 | INFO     | PID=551026 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-22 14:07:29] 2026-01-22 13:06:57,802 | INFO     | job 6977055580 has state=finished
[2026-01-22 14:07:29] 2026-01-22 13:06:57,802 | INFO     | preparing for final server update for job 6977055580 in state='finished'
[2026-01-22 14:07:29] 2026-01-22 13:06:57,803 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6977055580/jobReport.json
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | this job has now completed (state=finished)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | log transfer has been attempted: DONE
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | job 6977055580 has finished - writing final server update
[2026-01-22 14:07:29] 2026-01-22 13:06:57,804 | INFO     | total number of processed events: 400 (read)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6977055580/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | INFO     | extracted standard info from prmon json
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 14:07:29] 2026-01-22 13:06:57,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | fitting pss+swap vs Time
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | sum of square deviations: 106336877.5
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | sum of deviations: -8597593028.0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | mean x: 1769084979.5
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | mean y: 2566267.5714285714
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | intersect: 143037353852.79767
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | chi2: 0.04854065197109195
[2026-01-22 14:07:29] 2026-01-22 13:06:57,807 | INFO     | current memory leak: -80.85 B/s (using 70 data points, chi2=0.05)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | could have reported an average CPU frequency of 3513 MHz (6 samples)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | ..............................
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . Timing measurements:
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . get job = 0 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . initial setup = 3 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . payload setup = 2 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . stage-in = 0 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . payload execution = 4644 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . stage-out = 0 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | . log creation = 0 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,808 | INFO     | ..............................
[2026-01-22 14:07:29] 2026-01-22 13:06:57,837 | INFO     | 
[2026-01-22 14:07:29] 2026-01-22 13:06:57,837 | INFO     | job summary report
[2026-01-22 14:07:29] 2026-01-22 13:06:57,837 | INFO     | --------------------------------------------------
[2026-01-22 14:07:29] 2026-01-22 13:06:57,837 | INFO     | PanDA job id: 6977055580
[2026-01-22 14:07:29] 2026-01-22 13:06:57,837 | INFO     | task id: 48299557
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | errors: (none)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | pilot state: finished 
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | transexitcode: 0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | exeerrorcode: 0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | exeerrordiag: 
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | exitcode: 0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | exitmsg: OK
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | cpuconsumptiontime: 13349 s
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | nevents: 400
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | neventsw: 0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | pid: 555451
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | pgrp: 555451
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | corecount: 3
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | event service: False
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | sizes: {0: 2284378, 11: 2284378, 4650: 2319718, 4651: 2319718, 4653: 2319912}
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | --------------------------------------------------
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | 
[2026-01-22 14:07:29] 2026-01-22 13:06:57,838 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | job 6977055580 has completed (purged errors)
[2026-01-22 14:07:29] 2026-01-22 13:06:57,850 | INFO     | overall cleanup function is called
[2026-01-22 14:07:29] 2026-01-22 13:06:58,857 | INFO     | --- collectZombieJob: --- 10, [555451]
[2026-01-22 14:07:29] 2026-01-22 13:06:58,857 | INFO     | zombie collector waiting for pid 555451
[2026-01-22 14:07:29] 2026-01-22 13:06:58,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 14:07:29] 2026-01-22 13:06:58,857 | INFO     | collected zombie processes
[2026-01-22 14:07:29] 2026-01-22 13:06:58,857 | INFO     | will attempt to kill all subprocesses of pid=555451
[2026-01-22 14:07:29] 2026-01-22 13:06:58,898 | INFO     | process IDs to be killed: [555451] (in reverse order)
[2026-01-22 14:07:29] 2026-01-22 13:06:58,922 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 14:07:29] 2026-01-22 13:06:58,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 14:07:29] 2026-01-22 13:06:58,924 | INFO     | did not find any defunct processes belonging to 555451
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | did not find any defunct processes belonging to 555451
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | ready for new job
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | **************************************
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | **************************************
[2026-01-22 14:07:29] 2026-01-22 13:06:58,925 | INFO     | 
[2026-01-22 14:07:29] 2026-01-22 13:06:58,926 | INFO     | architecture information:
[2026-01-22 14:07:29] 2026-01-22 13:06:58,926 | INFO     | executing command: cat /etc/os-release
[2026-01-22 14:07:29] 2026-01-22 13:06:58,935 | INFO     | cat /etc/os-release:
[2026-01-22 14:07:29] NAME="CentOS Linux"
[2026-01-22 14:07:29] VERSION="7 (Core)"
[2026-01-22 14:07:29] ID="centos"
[2026-01-22 14:07:29] ID_LIKE="rhel fedora"
[2026-01-22 14:07:29] VERSION_ID="7"
[2026-01-22 14:07:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 14:07:29] ANSI_COLOR="0;31"
[2026-01-22 14:07:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 14:07:29] HOME_URL="https://www.centos.org/"
[2026-01-22 14:07:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 14:07:29] 
[2026-01-22 14:07:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 14:07:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 14:07:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 14:07:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 14:07:29] 
[2026-01-22 14:07:29] 2026-01-22 13:06:58,935 | INFO     | **************************************
[2026-01-22 14:07:29] 2026-01-22 13:06:59,438 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-22 14:07:29] 2026-01-22 13:06:59,451 | INFO     | sufficient remaining disk space (340218871808 B)
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | INFO     | update_server=False
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 14:07:29] 2026-01-22 13:06:59,452 | INFO     | aborting loop
[2026-01-22 14:07:29] 2026-01-22 13:06:59,536 | INFO     | all job control threads have been joined
[2026-01-22 14:07:29] 2026-01-22 13:07:00,285 | INFO     | all data control threads have been joined
[2026-01-22 14:07:29] 2026-01-22 13:07:00,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 14:07:29] 2026-01-22 13:07:00,458 | INFO     | [job] job monitor thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:00,458 | INFO     | [job] queue monitor thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:00,458 | INFO     | [job] retrieve thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:00,507 | INFO     | [data] copytool_in thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:00,542 | INFO     | [job] control thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:00,722 | INFO     | all payload control threads have been joined
[2026-01-22 14:07:29] 2026-01-22 13:07:00,770 | INFO     | [payload] failed_post thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,291 | INFO     | [data] control thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,564 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,728 | INFO     | [payload] control thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,782 | INFO     | [job] validate thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,793 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,804 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:01,993 | INFO     | [payload] validate_post thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:02,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 14:07:29] 2026-01-22 13:07:02,428 | INFO     | [data] copytool_out thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:06,175 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:10,032 | INFO     | job.realtimelogging is not enabled
[2026-01-22 14:07:29] 2026-01-22 13:07:11,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 14:07:29] 2026-01-22 13:07:19,163 | INFO     | [monitor] cgroup control has ended
[2026-01-22 14:07:29] 2026-01-22 13:07:20,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597979105088)>', '<ExcThread(monitor, started 140597348259584)>']
[2026-01-22 14:07:29] 2026-01-22 13:07:25,871 | INFO     | all workflow threads have been joined
[2026-01-22 14:07:29] 2026-01-22 13:07:25,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 14:07:29] 2026-01-22 13:07:25,871 | INFO     | traces error code: 0
[2026-01-22 14:07:29] 2026-01-22 13:07:25,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | INFO     | PID=551026 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 14:07:29] 2026-01-22 13:07:29,814 | INFO     | [monitor] control thread has ended
[2026-01-22 14:07:29] 2026-01-22 13:07:29,862 [wrapper] ==== pilot stdout END ====
[2026-01-22 14:07:29] 2026-01-22 13:07:29,864 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 14:07:29] 2026-01-22 13:07:29,867 [wrapper] pilotpid: 551026
[2026-01-22 14:07:29] 2026-01-22 13:07:29,869 [wrapper] Pilot exit status: 0
[2026-01-22 14:07:29] 2026-01-22 13:07:29,876 [wrapper] pandaids: 6977055580
[2026-01-22 14:07:29] 2026-01-22 13:07:29,891 [wrapper] cleanup supervisor_pilot  560502 551027
[2026-01-22 14:07:29] 2026-01-22 13:07:29,894 [wrapper] Test setup, not cleaning
[2026-01-22 14:07:29] 2026-01-22 13:07:29,896 [wrapper] apfmon messages muted
[2026-01-22 14:07:29] 2026-01-22 13:07:29,898 [wrapper] ==== wrapper stdout END ====
[2026-01-22 14:07:29] 2026-01-22 13:07:29,901 [wrapper] ==== wrapper stderr END ====
[2026-01-22 14:07:29]  *** Error codes and diagnostics ***
[2026-01-22 14:07:29]     "exeErrorCode": 0,
[2026-01-22 14:07:29]     "exeErrorDiag": "",
[2026-01-22 14:07:29]     "pilotErrorCode": 0,
[2026-01-22 14:07:29]     "pilotErrorDiag": "",
[2026-01-22 14:07:29]  *** Listing of results directory ***
[2026-01-22 14:07:29] total 421212
[2026-01-22 14:07:29] -rwx------ 1 boinc boinc     36322 Jan 21 02:23 runpilot2-wrapper.sh
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc    584422 Jan 21 02:23 pilot3.tar.gz
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc      5111 Jan 21 02:23 queuedata.json
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc       100 Jan 22 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 14:07:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 12:49 run_atlas
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc       105 Jan 22 12:49 job.xml
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc 260147717 Jan 22 12:49 EVNT.48299555._000002.pool.root.1
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc    597767 Jan 22 12:49 input.tar.gz
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc     15845 Jan 22 12:49 start_atlas.sh
[2026-01-22 14:07:29] drwxrwx--x 2 boinc boinc      4096 Jan 22 12:49 shared
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc         0 Jan 22 12:49 boinc_setup_complete
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc      6442 Jan 22 12:49 init_data.xml
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc         0 Jan 22 12:49 boinc_lockfile
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc      2622 Jan 22 12:49 pandaJob.out
[2026-01-22 14:07:29] -rw------- 1 boinc boinc   1002771 Jan 22 12:49 agis_schedconf.cvmfs.json
[2026-01-22 14:07:29] -rw------- 1 boinc boinc   1516246 Jan 22 12:49 agis_ddmendpoints.agis.ALL.json
[2026-01-22 14:07:29] -rw------- 1 boinc boinc       430 Jan 22 12:49 workernode_map.json
[2026-01-22 14:07:29] drwx------ 5 boinc boinc      4096 Jan 22 12:49 pilot3
[2026-01-22 14:07:29] -rw------- 1 boinc boinc        95 Jan 22 14:06 pilot_heartbeat.json
[2026-01-22 14:07:29] -rw------- 1 boinc boinc 165393519 Jan 22 14:06 HITS.48299557._000028.pool.root.1
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc       529 Jan 22 14:06 boinc_task_state.xml
[2026-01-22 14:07:29] -rw------- 1 boinc boinc      1020 Jan 22 14:06 memory_monitor_summary.json
[2026-01-22 14:07:29] -rw------- 1 boinc boinc    237094 Jan 22 14:06 log.48299557._000028.job.log.tgz.1
[2026-01-22 14:07:29] -rw------- 1 boinc boinc      6310 Jan 22 14:06 heartbeat.json
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc        27 Jan 22 14:07 wrapper_checkpoint.txt
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc      8192 Jan 22 14:07 boinc_mmap_file
[2026-01-22 14:07:29] -rw------- 1 boinc boinc       746 Jan 22 14:07 pilotlog.txt
[2026-01-22 14:07:29] -rw------- 1 boinc boinc    687104 Jan 22 14:07 log.48299557._000028.job.log.1
[2026-01-22 14:07:29] -rw------- 1 boinc boinc       357 Jan 22 14:07 output.list
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc       620 Jan 22 14:07 runtime_log
[2026-01-22 14:07:29] -rw------- 1 boinc boinc    942080 Jan 22 14:07 result.tar.gz
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc      8911 Jan 22 14:07 runtime_log.err
[2026-01-22 14:07:29] -rw------- 1 boinc boinc       660 Jan 22 14:07 QwhNDm47b28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4IxKDm0rIUon.diag
[2026-01-22 14:07:29] -rw-r--r-- 1 boinc boinc     21269 Jan 22 14:07 stderr.txt
[2026-01-22 14:07:29] HITS file was successfully produced:
[2026-01-22 14:07:29] -rw------- 1 boinc boinc 165393519 Jan 22 14:06 shared/HITS.pool.root.1
[2026-01-22 14:07:29]  *** Contents of shared directory: ***
[2026-01-22 14:07:29] total 417100
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc 260147717 Jan 22 12:49 ATLAS.root_0
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc    597767 Jan 22 12:49 input.tar.gz
[2026-01-22 14:07:29] -rw-r--r-- 2 boinc boinc     15845 Jan 22 12:49 start_atlas.sh
[2026-01-22 14:07:29] -rw------- 1 boinc boinc 165393519 Jan 22 14:06 HITS.pool.root.1
[2026-01-22 14:07:29] -rw------- 1 boinc boinc    942080 Jan 22 14:07 result.tar.gz
14:07:31 (547145): run_atlas exited; CPU time 13366.886140
14:07:31 (547145): called boinc_finish(0)

</stderr_txt>
]]>

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