Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-21 10:09:29 (11272): vboxwrapper version 26210
2026-01-21 10:09:29 (11272): BOINC client version: 8.2.8
2026-01-21 10:09:51 (11272): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-01-21 10:10:11 (11272): Successfully copied 'init_data.xml' to the shared directory.
2026-01-21 10:10:18 (11272): Create VM. (boinc_c6acb24ad0d51f66, slot#12)
2026-01-21 10:10:50 (11272): Setting Memory Size for VM. (4300MB)
2026-01-21 10:11:10 (11272): Setting CPU Count for VM. (3)
2026-01-21 10:11:27 (11272): Setting Chipset Options for VM.
2026-01-21 10:11:49 (11272): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-21 10:12:01 (11272): Setting Boot Options for VM.
2026-01-21 10:12:28 (11272): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-21 10:12:28 (11272): Enabling VM Network Access.
2026-01-21 10:12:29 (11272): Disabling USB Support for VM.
2026-01-21 10:12:29 (11272): Disabling COM Port Support for VM.
2026-01-21 10:12:29 (11272): Disabling LPT Port Support for VM.
2026-01-21 10:12:29 (11272): Disabling Audio Support for VM.
2026-01-21 10:12:30 (11272): Disabling Clipboard Support for VM.
2026-01-21 10:12:30 (11272): Disabling Drag and Drop Support for VM.
2026-01-21 10:12:30 (11272): Adding storage controller(s) to VM.
2026-01-21 10:12:31 (11272): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-21 10:12:33 (11272): Adding VirtualBox Guest Additions to VM.
2026-01-21 10:12:33 (11272): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-21 10:12:33 (11272): forwarding host port 61177 to guest port 80
2026-01-21 10:12:33 (11272): Enabling remote desktop for VM.
2026-01-21 10:12:34 (11272): Enabling shared directory for VM.
2026-01-21 10:12:35 (11272): Starting VM using VBoxManage interface. (boinc_c6acb24ad0d51f66, slot#12)
2026-01-21 10:12:45 (11272): Successfully started VM. (PID = '12404')
2026-01-21 10:12:45 (11272): Reporting VM Process ID to BOINC.
2026-01-21 10:12:45 (11272): Guest Log: BIOS: VirtualBox 7.1.10
2026-01-21 10:12:45 (11272): Guest Log: CPUID EDX: 0x178bfbff
2026-01-21 10:12:45 (11272): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-21 10:12:45 (11272): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-21 10:12:45 (11272): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-21 10:12:45 (11272): Detected: Web Application Enabled (http://localhost:61177)
2026-01-21 10:12:45 (11272): Detected: Remote Desktop Enabled (localhost:61178)
2026-01-21 10:12:45 (11272): Preference change detected
2026-01-21 10:12:46 (11272): Setting CPU throttle for VM. (100%)
2026-01-21 10:13:01 (11272): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-21 10:13:01 (11272): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-21 10:13:01 (11272): Guest Log: BIOS: Booting from Hard Disk...
2026-01-21 10:13:01 (11272): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-21 10:13:01 (11272): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-21 10:13:01 (11272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-21 10:13:01 (11272): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-21 10:13:01 (11272): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-21 10:13:08 (11272): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000217 main     Log opened 2026-01-21T10:13:05.884044000Z
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000433 main     OS Product: Linux
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000499 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000554 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000610 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000611 main     Process ID: 1310
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.000613 main     Package type: LINUX_64BITS_GENERIC
2026-01-21 10:13:08 (11272): Guest Log: 00:00:00.002419 main     5.2.32 r132073 started. Verbose level = 0
2026-01-21 10:13:08 (11272): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-21 10:13:08 (11272): Guest Log: [INFO] Mounting shared directory
2026-01-21 10:13:08 (11272): Guest Log: [INFO] Checking for init_data.xml
2026-01-21 10:13:19 (11272): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-21 10:13:19 (11272): Guest Log: [INFO] Detected branch: prod
2026-01-21 10:13:19 (11272): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-21 10:13:19 (11272): Guest Log: Copying input files
2026-01-21 10:13:19 (11272): Guest Log: 00:00:10.005434 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 709 389 000ns (GuestNow=1 769 019 197 598 301 000 ns GuestLast=1 768 990 385 888 912 000 ns fSetTimeLastLoop=true )
2026-01-21 10:13:19 (11272): Guest Log: Copied input files into RunAtlas.
2026-01-21 10:13:19 (11272): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-21 10:13:19 (11272): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-21 10:13:19 (11272): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-21 10:13:19 (11272): Guest Log: Further information can be found at the LHC@home message board.
2026-01-21 10:13:34 (11272): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-21 10:13:34 (11272): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-21 10:13:34 (11272): Guest Log: 2.6.3.0 1593 0 30172 155392 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-21 10:13:34 (11272): Guest Log: copied the webapp to /var/www
2026-01-21 10:13:34 (11272): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-21 10:13:34 (11272): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-21 10:13:34 (11272): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-21 10:13:34 (11272): Guest Log:  *** Starting ATLAS job. (PandaID=6977206725 taskID=48298187) ***
2026-01-21 12:03:39 (11272): Status Report: Elapsed Time: '6000.107687'
2026-01-21 12:03:40 (11272): Status Report: CPU Time: '17201.531250'
2026-01-21 13:56:57 (11272): Status Report: Elapsed Time: '12000.766829'
2026-01-21 13:56:57 (11272): Status Report: CPU Time: '37425.125000'
2026-01-21 15:51:32 (11272): Status Report: Elapsed Time: '18000.944355'
2026-01-21 15:51:33 (11272): Status Report: CPU Time: '57873.156250'
2026-01-21 17:45:16 (11272): Status Report: Elapsed Time: '24001.153227'
2026-01-21 17:45:16 (11272): Status Report: CPU Time: '78155.109375'
2026-01-21 19:00:33 (11272): Guest Log:  *** Job finished ***
2026-01-21 19:00:33 (11272): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:15,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:15,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:24,704 | INFO     | [monitor] cgroup control has ended
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:26,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959100499776)>', '<ExcThread(monitor, started 139958119544576)>']
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:27,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:27,699 | INFO     | [monitor] control thread has ended
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,801 | INFO     | all workflow threads have been joined
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,801 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,801 | INFO     | traces error code: 0
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,940 [wrapper] ==== pilot stdout END ====
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,949 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,957 [wrapper] pilotpid: 5999
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:31,965 [wrapper] Pilot exit status: 0
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,068 [wrapper] pandaids: 6977206725
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,112 [wrapper] cleanup supervisor_pilot  1048 6000
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,118 [wrapper] Test setup, not cleaning
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,124 [wrapper] apfmon messages muted
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,130 [wrapper] ==== wrapper stdout END ====
2026-01-21 19:00:33 (11272): Guest Log: 2026-01-22 03:00:32,136 [wrapper] ==== wrapper stderr END ====
2026-01-21 19:00:33 (11272): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 19:00:33 (11272): Guest Log:     "exeErrorCode": 0,
2026-01-21 19:00:33 (11272): Guest Log:     "exeErrorDiag": "",
2026-01-21 19:00:33 (11272): Guest Log:     "pilotErrorCode": 0,
2026-01-21 19:00:33 (11272): Guest Log:     "pilotErrorDiag": "",
2026-01-21 19:00:33 (11272): Guest Log:  *** Listing of results directory ***
2026-01-21 19:00:33 (11272): Guest Log: total 181112
2026-01-21 19:00:33 (11272): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 21 03:29 pilot3.tar.gz
2026-01-21 19:00:33 (11272): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 21 03:31 runpilot2-wrapper.sh
2026-01-21 19:00:33 (11272): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 21 03:34 queuedata.json
2026-01-21 19:00:33 (11272): Guest Log: -rwxr-xr-x. 1 atlas atlas      8644 Jan 21 18:13 init_data.xml
2026-01-21 19:00:33 (11272): Guest Log: -rwxr-xr-x. 1 atlas atlas    597769 Jan 21 18:13 input.tar.gz
2026-01-21 19:00:33 (11272): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 21 18:13 start_atlas.sh
2026-01-21 19:00:33 (11272): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 21 18:13 EVNT.48298184._000006.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 19:00:33 (11272): Guest Log: -rw-r--r--. 1 atlas atlas      2613 Jan 21 18:13 pandaJob.out
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas   1002771 Jan 21 18:15 agis_schedconf.cvmfs.json
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas       410 Jan 21 18:15 workernode_map.json
2026-01-21 19:00:33 (11272): Guest Log: drwx------. 5 atlas atlas      4096 Jan 21 18:15 pilot3
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas 171693850 Jan 22 02:58 HITS.48298187._000134.pool.root.1
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas      1029 Jan 22 02:59 memory_monitor_summary.json
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 22 02:59 agis_ddmendpoints.agis.ALL.json
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas    619250 Jan 22 02:59 log.48298187._000134.job.log.tgz.1
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas      6312 Jan 22 02:59 heartbeat.json
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas        95 Jan 22 03:00 pilot_heartbeat.json
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 22 03:00 pilotlog.txt
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas   4328600 Jan 22 03:00 log.48298187._000134.job.log.1
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas       357 Jan 22 03:00 output.list
2026-01-21 19:00:33 (11272): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 22 03:00 runtime_log
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas   4966400 Jan 22 03:00 result.tar.gz
2026-01-21 19:00:33 (11272): Guest Log: -rw-r--r--. 1 atlas atlas      8730 Jan 22 03:00 runtime_log.err
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas       655 Jan 22 03:00 GppNDm56d28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9vxKDmPnHs4n.diag
2026-01-21 19:00:33 (11272): Guest Log: Looking for outputfile HITS.48298187._000134.pool.root.1
2026-01-21 19:00:33 (11272): Guest Log: HITS file was successfully produced
2026-01-21 19:00:33 (11272): Guest Log: -rw-------. 1 atlas atlas 171693850 Jan 22 02:58 /home/atlas/RunAtlas/HITS.48298187._000134.pool.root.1
2026-01-21 19:00:35 (11272): Guest Log: Successfully finished the ATLAS job!
2026-01-21 19:00:35 (11272): Guest Log: Copying the results back to the shared directory!
2026-01-21 19:00:35 (11272): Guest Log:  *** Contents of shared directory: ***
2026-01-21 19:00:35 (11272): Guest Log: total 430108
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root 263135294 Jan 21 18:09 ATLAS.root_0
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root 171693850 Jan 22 03:00 HITS.pool.root.1
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root      8644 Jan 21 18:09 init_data.xml
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root    597769 Jan 21 17:42 input.tar.gz
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root   4966400 Jan 22 03:00 result.tar.gz
2026-01-21 19:00:35 (11272): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 17:42 start_atlas.sh
2026-01-21 19:00:35 (11272): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 19:00:35 (11272): VM Completion File Detected.
2026-01-21 19:00:35 (11272): Powering off VM.
2026-01-21 19:00:36 (11272): Successfully stopped VM.
2026-01-21 19:00:36 (11272): Deregistering VM. (boinc_c6acb24ad0d51f66, slot#12)
2026-01-21 19:00:36 (11272): Removing network bandwidth throttle group from VM.
2026-01-21 19:00:36 (11272): Removing VM from VirtualBox.
2026-01-21 19:00:41 (11272): called boinc_finish(0)

</stderr_txt>
]]>

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