Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:53:08 (2995928): wrapper (7.7.26015): starting
10:53:08 (2995928): wrapper: running run_atlas (--nthreads 6)
[2026-01-22 10:53:08] Arguments: --nthreads 6
[2026-01-22 10:53:08] Threads: 6
[2026-01-22 10:53:08] Checking for CVMFS
[2026-01-22 10:53:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 10:53:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 10:53:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 10:53:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 10:53:14] 2.13.3.0 2587536 1411 60056 155392 0 188 39880408 52428800 922 130560 0 1356301 99.996 31584 78 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-22 10:53:14] CVMFS is ok
[2026-01-22 10:53:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 10:53:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-22 10:53:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-22 10:53:14] Further information can be found at the LHC@home message board.
[2026-01-22 10:53:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 10:53:14] Checking for apptainer binary...
[2026-01-22 10:53:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 10:53:14] Running /usr/bin/apptainer --version
[2026-01-22 10:53:14] apptainer version 1.4.5-2.el9
[2026-01-22 10:53:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 10:53:14] Atto003
[2026-01-22 10:53:14] apptainer works
[2026-01-22 10:53:14] Set ATHENA_PROC_NUMBER=6
[2026-01-22 10:53:14] Set ATHENA_CORE_NUMBER=6
[2026-01-22 10:53:14] Starting ATLAS job with PandaID=6977221029
[2026-01-22 10:53:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 12:29:00]  *** The last 200 lines of the pilot log: ***
[2026-01-22 12:29:00]  filetype=log
[2026-01-22 12:29:00]  guid=1438f947-9692-4486-b91b-2a3ce4733257
[2026-01-22 12:29:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 12:29:00]  is_altstaged=None
[2026-01-22 12:29:00]  is_tar=False
[2026-01-22 12:29:00]  lfn=log.48299573._000085.job.log.tgz.1
[2026-01-22 12:29:00]  mtime=0
[2026-01-22 12:29:00]  protocol_id=None
[2026-01-22 12:29:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 12:29:00]  replicas=None
[2026-01-22 12:29:00]  scope=mc23_13p6TeV
[2026-01-22 12:29:00]  status=None
[2026-01-22 12:29:00]  status_code=0
[2026-01-22 12:29:00]  storage_token=
[2026-01-22 12:29:00]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6977221029/log.48299573._000085.job.log.tgz.1
[2026-01-22 12:29:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/5c/log.48299573._000085.job.log.tgz.1
[2026-01-22 12:29:00]  workdir=None
[2026-01-22 12:29:00] ]
[2026-01-22 12:29:00] 2026-01-22 03:28:25,475 | INFO     | transferring file log.48299573._000085.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6977221029/log.48299573._000085.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-22 12:29:00] 2026-01-22 03:28:25,475 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6977221029/log.48299573._000085.job.log.tgz.1 /var/lib/boinc/slots/3/log.48299573._000085.job
[2026-01-22 12:29:00] 2026-01-22 03:28:25,485 | INFO     | adding to output.list: log.48299573._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/5c/log.48299573._000085.job.log.tg
[2026-01-22 12:29:00] 2026-01-22 03:28:25,485 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 12:29:00] 2026-01-22 03:28:25,485 | INFO     | summary of transferred files:
[2026-01-22 12:29:00] 2026-01-22 03:28:25,485 | INFO     |  -- lfn=log.48299573._000085.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 12:29:00] 2026-01-22 03:28:25,485 | INFO     | stage-out finished correctly
[2026-01-22 12:29:00] 2026-01-22 03:28:26,741 | INFO     | time since job start (5687s) is within the limit (349056.0s)
[2026-01-22 12:29:00] 2026-01-22 03:28:27,121 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 12:29:00] 2026-01-22 03:28:27,611 | INFO     | monitor loop #436: job 0:6977221029 is in state 'finished'
[2026-01-22 12:29:00] 2026-01-22 03:28:27,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,442 | INFO     | job 6977221029 has state=finished
[2026-01-22 12:29:00] 2026-01-22 03:28:28,442 | INFO     | preparing for final server update for job 6977221029 in state='finished'
[2026-01-22 12:29:00] 2026-01-22 03:28:28,442 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-6977221029/jobReport.json
[2026-01-22 12:29:00] 2026-01-22 03:28:28,443 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-01-22 12:29:00] 2026-01-22 03:28:28,444 | INFO     | this job has now completed (state=finished)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,444 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,444 | INFO     | log transfer has been attempted: DONE
[2026-01-22 12:29:00] 2026-01-22 03:28:28,444 | INFO     | job 6977221029 has finished - writing final server update
[2026-01-22 12:29:00] 2026-01-22 03:28:28,444 | INFO     | total number of processed events: 400 (read)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6977221029/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | INFO     | extracted standard info from prmon json
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 12:29:00] 2026-01-22 03:28:28,447 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | fitting pss+swap vs Time
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | sum of square deviations: 197203697.5
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | sum of deviations: 616500769.9999999
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | mean x: 1769049735.5
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | mean y: 2675076.488372093
[2026-01-22 12:29:00] 2026-01-22 03:28:28,449 | INFO     | intersect: -5527751269.113216
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | chi2: 0.004202294101211097
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | current memory leak: 3.13 B/s (using 86 data points, chi2=0.00)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | could have reported an average CPU frequency of 3699 MHz (7 samples)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | ..............................
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . Timing measurements:
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . get job = 0 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . initial setup = 9 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . payload setup = 4 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . stage-in = 0 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . payload execution = 5666 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . stage-out = 0 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,450 | INFO     | . log creation = 0 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,451 | INFO     | ..............................
[2026-01-22 12:29:00] 2026-01-22 03:28:28,514 | INFO     | 
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | job summary report
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | --------------------------------------------------
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | PanDA job id: 6977221029
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | task id: 48299573
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | errors: (none)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | pilot state: finished 
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | transexitcode: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | exeerrorcode: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | exeerrordiag: 
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | exitcode: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | exitmsg: OK
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | cpuconsumptiontime: 32013 s
[2026-01-22 12:29:00] 2026-01-22 03:28:28,515 | INFO     | nevents: 400
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | neventsw: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | pid: 3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | pgrp: 3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | corecount: 6
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | event service: False
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | sizes: {0: 2284112, 1: 2284374, 11: 2284402, 5674: 2311147, 5675: 2320145, 5676: 2320201, 5678: 2320523}
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | --------------------------------------------------
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | 
[2026-01-22 12:29:00] 2026-01-22 03:28:28,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-22 12:29:00] 2026-01-22 03:28:28,528 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,528 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | job 6977221029 has completed (purged errors)
[2026-01-22 12:29:00] 2026-01-22 03:28:28,530 | INFO     | overall cleanup function is called
[2026-01-22 12:29:00] 2026-01-22 03:28:29,536 | INFO     | --- collectZombieJob: --- 10, [3004677]
[2026-01-22 12:29:00] 2026-01-22 03:28:29,537 | INFO     | zombie collector waiting for pid 3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:29,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 12:29:00] 2026-01-22 03:28:29,537 | INFO     | collected zombie processes
[2026-01-22 12:29:00] 2026-01-22 03:28:29,537 | INFO     | will attempt to kill all subprocesses of pid=3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:29,606 | INFO     | process IDs to be killed: [3004677] (in reverse order)
[2026-01-22 12:29:00] 2026-01-22 03:28:29,631 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 12:29:00] 2026-01-22 03:28:29,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 12:29:00] 2026-01-22 03:28:29,633 | INFO     | did not find any defunct processes belonging to 3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:29,634 | INFO     | did not find any defunct processes belonging to 3004677
[2026-01-22 12:29:00] 2026-01-22 03:28:29,634 | INFO     | ready for new job
[2026-01-22 12:29:00] 2026-01-22 03:28:29,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 12:29:00] 2026-01-22 03:28:29,634 | INFO     | **************************************
[2026-01-22 12:29:00] 2026-01-22 03:28:29,635 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 12:29:00] 2026-01-22 03:28:29,635 | INFO     | **************************************
[2026-01-22 12:29:00] 2026-01-22 03:28:29,635 | INFO     | 
[2026-01-22 12:29:00] 2026-01-22 03:28:29,635 | INFO     | architecture information:
[2026-01-22 12:29:00] 2026-01-22 03:28:29,635 | INFO     | executing command: cat /etc/os-release
[2026-01-22 12:29:00] 2026-01-22 03:28:29,643 | INFO     | cat /etc/os-release:
[2026-01-22 12:29:00] NAME="CentOS Linux"
[2026-01-22 12:29:00] VERSION="7 (Core)"
[2026-01-22 12:29:00] ID="centos"
[2026-01-22 12:29:00] ID_LIKE="rhel fedora"
[2026-01-22 12:29:00] VERSION_ID="7"
[2026-01-22 12:29:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 12:29:00] ANSI_COLOR="0;31"
[2026-01-22 12:29:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 12:29:00] HOME_URL="https://www.centos.org/"
[2026-01-22 12:29:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 12:29:00] 
[2026-01-22 12:29:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 12:29:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 12:29:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 12:29:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 12:29:00] 
[2026-01-22 12:29:00] 2026-01-22 03:28:29,643 | INFO     | **************************************
[2026-01-22 12:29:00] 2026-01-22 03:28:30,145 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-22 12:29:00] 2026-01-22 03:28:30,152 | INFO     | sufficient remaining disk space (104284028928 B)
[2026-01-22 12:29:00] 2026-01-22 03:28:30,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 12:29:00] 2026-01-22 03:28:30,153 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 12:29:00] 2026-01-22 03:28:30,153 | INFO     | update_server=False
[2026-01-22 12:29:00] 2026-01-22 03:28:30,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 12:29:00] 2026-01-22 03:28:30,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 12:29:00] 2026-01-22 03:28:30,466 | INFO     | all payload control threads have been joined
[2026-01-22 12:29:00] 2026-01-22 03:28:30,559 | INFO     | all job control threads have been joined
[2026-01-22 12:29:00] 2026-01-22 03:28:30,689 | INFO     | all data control threads have been joined
[2026-01-22 12:29:00] 2026-01-22 03:28:31,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 12:29:00] 2026-01-22 03:28:31,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 12:29:00] 2026-01-22 03:28:31,119 | INFO     | aborting loop
[2026-01-22 12:29:00] 2026-01-22 03:28:31,158 | INFO     | [job] retrieve thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,158 | INFO     | [job] queue monitor thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,438 | INFO     | [payload] failed_post thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,471 | INFO     | [payload] control thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,523 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,565 | INFO     | [job] control thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,694 | INFO     | [data] control thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,848 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,878 | INFO     | [data] copytool_in thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:31,982 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:32,117 | INFO     | [job] validate thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:32,124 | INFO     | [job] job monitor thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:32,444 | INFO     | [payload] validate_post thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:33,049 | INFO     | [data] copytool_out thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:33,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 12:29:00] 2026-01-22 03:28:37,192 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:40,722 | INFO     | job.realtimelogging is not enabled
[2026-01-22 12:29:00] 2026-01-22 03:28:41,727 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 12:29:00] 2026-01-22 03:28:48,536 | INFO     | [monitor] cgroup control has ended
[2026-01-22 12:29:00] 2026-01-22 03:28:50,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491907487552)>', '<ExcThread(monitor, started 140491458864896)>']
[2026-01-22 12:29:00] 2026-01-22 03:28:55,381 | INFO     | all workflow threads have been joined
[2026-01-22 12:29:00] 2026-01-22 03:28:55,381 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 12:29:00] 2026-01-22 03:28:55,381 | INFO     | traces error code: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:55,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | INFO     | PID=3000052 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | INFO     | .. there are 2 such processes running
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | CRITICAL | thread 'MainThread' is not alive
[2026-01-22 12:29:00] 2026-01-22 03:28:59,875 | INFO     | [monitor] control thread has ended
[2026-01-22 12:29:00] 2026-01-22 03:28:59,939 [wrapper] ==== pilot stdout END ====
[2026-01-22 12:29:00] 2026-01-22 03:28:59,940 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 12:29:00] 2026-01-22 03:28:59,941 [wrapper] pilotpid: 3000052
[2026-01-22 12:29:00] 2026-01-22 03:28:59,942 [wrapper] Pilot exit status: 0
[2026-01-22 12:29:00] 2026-01-22 03:28:59,947 [wrapper] pandaids: 6977221029
[2026-01-22 12:29:00] 2026-01-22 03:28:59,964 [wrapper] cleanup supervisor_pilot 3022823 3000053
[2026-01-22 12:29:00] 2026-01-22 03:28:59,968 [wrapper] Test setup, not cleaning
[2026-01-22 12:29:00] 2026-01-22 03:28:59,970 [wrapper] apfmon messages muted
[2026-01-22 12:29:00] 2026-01-22 03:28:59,972 [wrapper] ==== wrapper stdout END ====
[2026-01-22 12:29:00] 2026-01-22 03:28:59,974 [wrapper] ==== wrapper stderr END ====
[2026-01-22 12:29:00]  *** Error codes and diagnostics ***
[2026-01-22 12:29:00]     "exeErrorCode": 0,
[2026-01-22 12:29:00]     "exeErrorDiag": "",
[2026-01-22 12:29:00]     "pilotErrorCode": 0,
[2026-01-22 12:29:00]     "pilotErrorDiag": "",
[2026-01-22 12:29:00]  *** Listing of results directory ***
[2026-01-22 12:29:00] total 419264
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc    584422 Jan 21 12:29 pilot3.tar.gz
[2026-01-22 12:29:00] -rwx------. 1 boinc boinc     36322 Jan 21 12:31 runpilot2-wrapper.sh
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc      5111 Jan 21 12:34 queuedata.json
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc       100 Jan 22 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 12:29:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan 22 10:53 run_atlas
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc       105 Jan 22 10:53 job.xml
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc 255709443 Jan 22 10:53 EVNT.48299571._000004.pool.root.1
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc     15845 Jan 22 10:53 start_atlas.sh
[2026-01-22 12:29:00] drwxrwx--x. 2 boinc boinc        68 Jan 22 10:53 shared
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc    597771 Jan 22 10:53 input.tar.gz
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc         0 Jan 22 10:53 boinc_lockfile
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc      2620 Jan 22 10:53 pandaJob.out
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc   1002771 Jan 22 10:53 agis_schedconf.cvmfs.json
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc   1516246 Jan 22 10:53 agis_ddmendpoints.agis.ALL.json
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc       419 Jan 22 10:53 workernode_map.json
[2026-01-22 12:29:00] drwx------. 5 boinc boinc      4096 Jan 22 10:53 pilot3
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc      9352 Jan 22 12:17 init_data.xml
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc 167391897 Jan 22 12:27 HITS.48299573._000085.pool.root.1
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc       529 Jan 22 12:27 boinc_task_state.xml
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc        95 Jan 22 12:28 pilot_heartbeat.json
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc      1017 Jan 22 12:28 memory_monitor_summary.json
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc    307509 Jan 22 12:28 log.48299573._000085.job.log.tgz.1
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc      6294 Jan 22 12:28 heartbeat.json
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc      8192 Jan 22 12:28 boinc_mmap_file
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc        27 Jan 22 12:28 wrapper_checkpoint.txt
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc       892 Jan 22 12:28 pilotlog.txt
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc    843084 Jan 22 12:28 log.48299573._000085.job.log.1
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc       357 Jan 22 12:28 output.list
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc       620 Jan 22 12:29 runtime_log
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc   1167360 Jan 22 12:29 result.tar.gz
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc      8764 Jan 22 12:29 runtime_log.err
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc       637 Jan 22 12:29 1K8MDmG7d28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmNrKDmlyJznm.diag
[2026-01-22 12:29:00] -rw-r--r--. 1 boinc boinc     21307 Jan 22 12:29 stderr.txt
[2026-01-22 12:29:00] HITS file was successfully produced:
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc 167391897 Jan 22 12:27 shared/HITS.pool.root.1
[2026-01-22 12:29:00]  *** Contents of shared directory: ***
[2026-01-22 12:29:00] total 414932
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc 255709443 Jan 22 10:53 ATLAS.root_0
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc     15845 Jan 22 10:53 start_atlas.sh
[2026-01-22 12:29:00] -rw-r--r--. 2 boinc boinc    597771 Jan 22 10:53 input.tar.gz
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc 167391897 Jan 22 12:27 HITS.pool.root.1
[2026-01-22 12:29:00] -rw-------. 1 boinc boinc   1167360 Jan 22 12:29 result.tar.gz
12:29:01 (2995928): run_atlas exited; CPU time 32071.118802
12:29:01 (2995928): called boinc_finish(0)

</stderr_txt>
]]>

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