Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:33:55 (10265): wrapper (7.7.26015): starting
18:33:55 (10265): wrapper: running run_atlas (--nthreads 8)
[2026-01-21 18:33:55] Arguments: --nthreads 8
[2026-01-21 18:33:55] Threads: 8
[2026-01-21 18:33:55] Checking for CVMFS
[2026-01-21 18:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 18:33:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 18:33:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 18:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 18:33:55] 2.11.0.0 4525 53091 71360 155392 0 2 2932933 4096001 1 130560 0 2544309 99.229 3561524 595 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-21 18:33:55] CVMFS is ok
[2026-01-21 18:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-21 18:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-21 18:33:55] Further information can be found at the LHC@home message board.
[2026-01-21 18:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 18:33:55] Checking for apptainer binary...
[2026-01-21 18:33:55] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-21 18:33:55] apptainer is not installed, using version from CVMFS
[2026-01-21 18:33:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 18:34:55] WARNING: Environment variable TMPDIR already has value [/tmp/job_11035168/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-01-21 18:34:55] apptainer works
[2026-01-21 18:34:55] Set ATHENA_PROC_NUMBER=8
[2026-01-21 18:34:55] Set ATHENA_CORE_NUMBER=8
[2026-01-21 18:34:55] Starting ATLAS job with PandaID=6976962974
[2026-01-21 18:34:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11035168/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 19:58:32]  *** The last 200 lines of the pilot log: ***
[2026-01-21 19:58:32]  is_altstaged=None
[2026-01-21 19:58:32]  is_tar=False
[2026-01-21 19:58:32]  lfn=log.48298302._000240.job.log.tgz.1
[2026-01-21 19:58:32]  mtime=0
[2026-01-21 19:58:32]  protocol_id=None
[2026-01-21 19:58:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 19:58:32]  replicas=None
[2026-01-21 19:58:32]  scope=mc23_13p6TeV
[2026-01-21 19:58:32]  status=None
[2026-01-21 19:58:32]  status_code=0
[2026-01-21 19:58:32]  storage_token=
[2026-01-21 19:58:32]  surl=/tmp/job_11035168/atlas/pilot/slots/0/PanDA_Pilot-6976962974/log.48298302._000240.job.log.tgz.1
[2026-01-21 19:58:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/42/log.48298302._000240.job.log.tgz.1
[2026-01-21 19:58:32]  workdir=None
[2026-01-21 19:58:32] ]
[2026-01-21 19:58:32] 2026-01-21 18:57:56,354 | INFO     | transferring file log.48298302._000240.job.log.tgz.1 from /tmp/job_11035168/atlas/pilot/slots/0/PanDA_Pilot-6976962974/log.48298302._000240.job.log.tgz.1 to /tmp/j
[2026-01-21 19:58:32] 2026-01-21 18:57:56,354 | INFO     | executing command: /usr/bin/env mv /tmp/job_11035168/atlas/pilot/slots/0/PanDA_Pilot-6976962974/log.48298302._000240.job.log.tgz.1 /tmp/job_11035168/atlas/pilot/sl
[2026-01-21 19:58:32] 2026-01-21 18:57:56,362 | INFO     | adding to output.list: log.48298302._000240.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/42/log.48298302._000240.job.log.tg
[2026-01-21 19:58:32] 2026-01-21 18:57:56,363 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 19:58:32] 2026-01-21 18:57:56,363 | INFO     | summary of transferred files:
[2026-01-21 19:58:32] 2026-01-21 18:57:56,363 | INFO     |  -- lfn=log.48298302._000240.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 19:58:32] 2026-01-21 18:57:56,363 | INFO     | stage-out finished correctly
[2026-01-21 19:58:32] 2026-01-21 18:57:56,655 | INFO     | time since job start (4850s) is within the limit (349056.0s)
[2026-01-21 19:58:32] 2026-01-21 18:57:56,995 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 19:58:32] 2026-01-21 18:57:58,391 | INFO     | monitor loop #423: job 0:6976962974 is in state 'finished'
[2026-01-21 19:58:32] 2026-01-21 18:57:58,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 19:58:32] 2026-01-21 18:57:58,661 | INFO     | time since job start (4852s) is within the limit (349056.0s)
[2026-01-21 19:58:32] 2026-01-21 18:57:58,837 | INFO     | job 6976962974 has state=finished
[2026-01-21 19:58:32] 2026-01-21 18:57:58,837 | INFO     | preparing for final server update for job 6976962974 in state='finished'
[2026-01-21 19:58:32] 2026-01-21 18:57:59,400 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,400 | INFO     | reading metadata from: /tmp/job_11035168/atlas/pilot/slots/0/PanDA_Pilot-6976962974/jobReport.json
[2026-01-21 19:58:32] 2026-01-21 18:57:59,401 | INFO     | added worker_node to metadata from /tmp/job_11035168/atlas/pilot/slots/0/workernode_map.json
[2026-01-21 19:58:32] 2026-01-21 18:57:59,402 | INFO     | this job has now completed (state=finished)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,402 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,402 | INFO     | log transfer has been attempted: DONE
[2026-01-21 19:58:32] 2026-01-21 18:57:59,402 | INFO     | job 6976962974 has finished - writing final server update
[2026-01-21 19:58:32] 2026-01-21 18:57:59,402 | INFO     | total number of processed events: 400 (read)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | INFO     | using path: /tmp/job_11035168/atlas/pilot/slots/0/PanDA_Pilot-6976962974/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | INFO     | extracted standard info from prmon json
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 19:58:32] 2026-01-21 18:57:59,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | fitting pss+swap vs Time
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | sum of square deviations: 106336877.5
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | sum of deviations: 70027075514.5
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | mean x: 1769019630.5
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | mean y: 1908925.9
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | intersect: -1164968082332.8372
[2026-01-21 19:58:32] 2026-01-21 18:57:59,421 | INFO     | chi2: 9.910701045795467
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | current memory leak: 658.54 B/s (using 70 data points, chi2=9.91)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | could have reported an average CPU frequency of 2395 MHz (6 samples)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | ..............................
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . Timing measurements:
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . get job = 0 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . initial setup = 13 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . payload setup = 176 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . stage-in = 0 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . payload execution = 4656 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . stage-out = 0 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | . log creation = 0 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,422 | INFO     | ..............................
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | 
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | job summary report
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | --------------------------------------------------
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | PanDA job id: 6976962974
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | task id: 48298302
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | errors: (none)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | pilot state: finished 
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | transexitcode: 0
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | exeerrorcode: 0
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | exeerrordiag: 
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | exitcode: 0
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | exitmsg: OK
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | cpuconsumptiontime: 20905 s
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | nevents: 400
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | neventsw: 0
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | pid: 6884
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | pgrp: 6884
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | corecount: 8
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | event service: False
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | sizes: {0: 2283312, 1: 2284294, 2: 2284556, 12: 2284584, 4837: 2310833, 4838: 2319861, 4839: 2320045, 4841: 2320239}
[2026-01-21 19:58:32] 2026-01-21 18:57:59,469 | INFO     | --------------------------------------------------
[2026-01-21 19:58:32] 2026-01-21 18:57:59,470 | INFO     | 
[2026-01-21 19:58:32] 2026-01-21 18:57:59,470 | INFO     | executing command: ls -lF /tmp/job_11035168/atlas/pilot/slots/0
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | job 6976962974 has completed (purged errors)
[2026-01-21 19:58:32] 2026-01-21 18:57:59,481 | INFO     | overall cleanup function is called
[2026-01-21 19:58:32] 2026-01-21 18:57:59,793 | INFO     | PID=1415 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-21 19:58:32] 2026-01-21 18:57:59,793 | INFO     | .. there are 3 such processes running
[2026-01-21 19:58:32] 2026-01-21 18:58:00,487 | INFO     | --- collectZombieJob: --- 10, [6884]
[2026-01-21 19:58:32] 2026-01-21 18:58:00,487 | INFO     | zombie collector waiting for pid 6884
[2026-01-21 19:58:32] 2026-01-21 18:58:00,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 19:58:32] 2026-01-21 18:58:00,487 | INFO     | collected zombie processes
[2026-01-21 19:58:32] 2026-01-21 18:58:00,487 | INFO     | will attempt to kill all subprocesses of pid=6884
[2026-01-21 19:58:32] 2026-01-21 18:58:00,587 | INFO     | process IDs to be killed: [6884] (in reverse order)
[2026-01-21 19:58:32] 2026-01-21 18:58:00,624 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 19:58:32] 2026-01-21 18:58:00,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 19:58:32] 2026-01-21 18:58:00,629 | INFO     | did not find any defunct processes belonging to 6884
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | did not find any defunct processes belonging to 6884
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | ready for new job
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | **************************************
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 19:58:32] 2026-01-21 18:58:00,632 | INFO     | **************************************
[2026-01-21 19:58:32] 2026-01-21 18:58:00,633 | INFO     | 
[2026-01-21 19:58:32] 2026-01-21 18:58:00,647 | INFO     | architecture information:
[2026-01-21 19:58:32] 2026-01-21 18:58:00,647 | INFO     | executing command: cat /etc/os-release
[2026-01-21 19:58:32] 2026-01-21 18:58:00,653 | INFO     | cat /etc/os-release:
[2026-01-21 19:58:32] NAME="CentOS Linux"
[2026-01-21 19:58:32] VERSION="7 (Core)"
[2026-01-21 19:58:32] ID="centos"
[2026-01-21 19:58:32] ID_LIKE="rhel fedora"
[2026-01-21 19:58:32] VERSION_ID="7"
[2026-01-21 19:58:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 19:58:32] ANSI_COLOR="0;31"
[2026-01-21 19:58:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 19:58:32] HOME_URL="https://www.centos.org/"
[2026-01-21 19:58:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 19:58:32] 
[2026-01-21 19:58:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 19:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 19:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 19:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 19:58:32] 
[2026-01-21 19:58:32] 2026-01-21 18:58:00,653 | INFO     | **************************************
[2026-01-21 19:58:32] 2026-01-21 18:58:01,156 | INFO     | executing command: df -mP /tmp/job_11035168/atlas/pilot/slots/0
[2026-01-21 19:58:32] 2026-01-21 18:58:01,162 | INFO     | sufficient remaining disk space (226277457920 B)
[2026-01-21 19:58:32] 2026-01-21 18:58:01,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 19:58:32] 2026-01-21 18:58:01,163 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 19:58:32] 2026-01-21 18:58:01,163 | INFO     | update_server=False
[2026-01-21 19:58:32] 2026-01-21 18:58:01,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 19:58:32] 2026-01-21 18:58:01,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 19:58:32] 2026-01-21 18:58:01,564 | INFO     | all payload control threads have been joined
[2026-01-21 19:58:32] 2026-01-21 18:58:01,629 | INFO     | all data control threads have been joined
[2026-01-21 19:58:32] 2026-01-21 18:58:01,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 19:58:32] 2026-01-21 18:58:01,899 | INFO     | aborting loop
[2026-01-21 19:58:32] 2026-01-21 18:58:01,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 19:58:32] 2026-01-21 18:58:02,168 | INFO     | [job] retrieve thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,168 | INFO     | [job] queue monitor thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,479 | INFO     | [data] copytool_in thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,482 | INFO     | [payload] failed_post thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,569 | INFO     | [payload] control thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,634 | INFO     | [data] control thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,808 | INFO     | all job control threads have been joined
[2026-01-21 19:58:32] 2026-01-21 18:58:02,904 | INFO     | [job] job monitor thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:02,974 | INFO     | [payload] validate_post thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 19:58:32] 2026-01-21 18:58:03,559 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,569 | INFO     | [job] validate thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,580 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,607 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,813 | INFO     | [job] control thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:03,927 | INFO     | [data] copytool_out thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:07,050 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:11,416 | INFO     | job.realtimelogging is not enabled
[2026-01-21 19:58:32] 2026-01-21 18:58:12,421 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 19:58:32] 2026-01-21 18:58:12,790 | INFO     | [monitor] cgroup control has ended
[2026-01-21 19:58:32] 2026-01-21 18:58:14,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063182592)>']
[2026-01-21 19:58:32] 2026-01-21 18:58:19,505 | INFO     | all workflow threads have been joined
[2026-01-21 19:58:32] 2026-01-21 18:58:19,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 19:58:32] 2026-01-21 18:58:19,506 | INFO     | traces error code: 0
[2026-01-21 19:58:32] 2026-01-21 18:58:19,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | INFO     | PID=1415 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | INFO     | .. there are 3 such processes running
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 19:58:32] 2026-01-21 18:58:31,977 | INFO     | [monitor] control thread has ended
[2026-01-21 19:58:32] 2026-01-21 18:58:32,030 [wrapper] ==== pilot stdout END ====
[2026-01-21 19:58:32] 2026-01-21 18:58:32,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 19:58:32] 2026-01-21 18:58:32,033 [wrapper] pilotpid: 1415
[2026-01-21 19:58:32] 2026-01-21 18:58:32,034 [wrapper] Pilot exit status: 0
[2026-01-21 19:58:32] 2026-01-21 18:58:32,038 [wrapper] pandaids: 6976962974
[2026-01-21 19:58:32] 2026-01-21 18:58:32,061 [wrapper] cleanup supervisor_pilot 23543 1416
[2026-01-21 19:58:32] 2026-01-21 18:58:32,063 [wrapper] Test setup, not cleaning
[2026-01-21 19:58:32] 2026-01-21 18:58:32,064 [wrapper] apfmon messages muted
[2026-01-21 19:58:32] 2026-01-21 18:58:32,065 [wrapper] ==== wrapper stdout END ====
[2026-01-21 19:58:32] 2026-01-21 18:58:32,066 [wrapper] ==== wrapper stderr END ====
[2026-01-21 19:58:32]  *** Error codes and diagnostics ***
[2026-01-21 19:58:32]     "exeErrorCode": 0,
[2026-01-21 19:58:32]     "exeErrorDiag": "",
[2026-01-21 19:58:32]     "pilotErrorCode": 0,
[2026-01-21 19:58:32]     "pilotErrorDiag": "",
[2026-01-21 19:58:32]  *** Listing of results directory ***
[2026-01-21 19:58:32] total 426612
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user    584422 Jan 20 23:53 pilot3.tar.gz
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      5111 Jan 20 23:57 queuedata.json
[2026-01-21 19:58:32] -rwx------ 1 mf493845 unix-user     36322 Jan 20 23:57 runpilot2-wrapper.sh
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       100 Jan 21 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 19:58:32] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 21 17:29 run_atlas
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       105 Jan 21 17:29 job.xml
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 21 18:33 start_atlas.sh
[2026-01-21 19:58:32] drwxrwx--x 2 mf493845 unix-user       100 Jan 21 18:33 shared
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user    597780 Jan 21 18:33 input.tar.gz
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      6390 Jan 21 18:33 init_data.xml
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user 254486487 Jan 21 18:33 EVNT.48298299._000012.pool.root.1
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user         0 Jan 21 18:33 boinc_setup_complete
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      8192 Jan 21 18:33 boinc_mmap_file
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user         0 Jan 21 18:33 boinc_lockfile
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      2646 Jan 21 18:34 pandaJob.out
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user   1002771 Jan 21 18:36 agis_schedconf.cvmfs.json
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user   1516246 Jan 21 18:36 agis_ddmendpoints.agis.ALL.json
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       420 Jan 21 18:37 workernode_map.json
[2026-01-21 19:58:32] drwx------ 5 mf493845 unix-user       440 Jan 21 18:37 pilot3
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user 176341725 Jan 21 19:57 HITS.48298302._000240.pool.root.1
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user        95 Jan 21 19:57 pilot_heartbeat.json
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      1020 Jan 21 19:57 memory_monitor_summary.json
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user    326477 Jan 21 19:57 log.48298302._000240.job.log.tgz.1
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      6321 Jan 21 19:57 heartbeat.json
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       819 Jan 21 19:58 pilotlog.txt
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user    732583 Jan 21 19:58 log.48298302._000240.job.log.1
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       357 Jan 21 19:58 output.list
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       620 Jan 21 19:58 runtime_log
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user   1075200 Jan 21 19:58 result.tar.gz
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user      9219 Jan 21 19:58 runtime_log.err
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user       643 Jan 21 19:58 FpELDmBqZ28n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2bqKDmrzZIpn.diag
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user     22037 Jan 21 19:58 stderr.txt
[2026-01-21 19:58:32] HITS file was successfully produced:
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user 176341725 Jan 21 19:57 shared/HITS.pool.root.1
[2026-01-21 19:58:32]  *** Contents of shared directory: ***
[2026-01-21 19:58:32] total 422388
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 21 18:33 start_atlas.sh
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user    597780 Jan 21 18:33 input.tar.gz
[2026-01-21 19:58:32] -rw-r--r-- 2 mf493845 unix-user 254486487 Jan 21 18:33 ATLAS.root_0
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user 176341725 Jan 21 19:57 HITS.pool.root.1
[2026-01-21 19:58:32] -rw------- 1 mf493845 unix-user   1075200 Jan 21 19:58 result.tar.gz
19:58:33 (10265): run_atlas exited; CPU time 20971.785021
19:58:33 (10265): called boinc_finish(0)

</stderr_txt>
]]>

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