Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:42:12 (3251672): wrapper (7.7.26015): starting
00:42:12 (3251672): wrapper: running run_atlas (--nthreads 12)
[2026-01-22 00:42:12] Arguments: --nthreads 12
[2026-01-22 00:42:12] Threads: 12
[2026-01-22 00:42:12] Checking for CVMFS
[2026-01-22 00:42:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 00:42:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 01:04:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 01:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 01:04:55] 2.13.3.0 9099 17804 260428 155392 3 989 30064388 46080001 17750 130560 0 80655039 99.807 48208861 28143 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-22 01:04:55] CVMFS is ok
[2026-01-22 01:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 01:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 01:04:55] Further information can be found at the LHC@home message board.
[2026-01-22 01:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 01:04:55] Checking for apptainer binary...
[2026-01-22 01:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 01:04:55] Running /usr/bin/apptainer --version
[2026-01-22 01:04:55] apptainer version 1.4.5-2.el9
[2026-01-22 01:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 01:04:56] mff2104.farm.particle.cz
[2026-01-22 01:04:56] apptainer works
[2026-01-22 01:04:56] Set ATHENA_PROC_NUMBER=12
[2026-01-22 01:04:56] Set ATHENA_CORE_NUMBER=12
[2026-01-22 01:04:56] Starting ATLAS job with PandaID=6969274744
[2026-01-22 01:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 02:14:45]  *** The last 200 lines of the pilot log: ***
[2026-01-22 02:14:45] 2026-01-22 01:00:43,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:44,340 | INFO     | PID=3299157 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 02:14:45] 2026-01-22 01:00:44,340 | INFO     | .. there are 22 such processes running
[2026-01-22 02:14:45] 2026-01-22 01:00:45,341 | INFO     | time since job start (3250s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:45,829 | INFO     | monitor loop #264: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:45,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:47,348 | INFO     | time since job start (3252s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:48,334 | INFO     | monitor loop #265: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:48,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:49,355 | INFO     | time since job start (3254s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:50,841 | INFO     | monitor loop #266: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:50,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:51,363 | INFO     | time since job start (3256s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:53,349 | INFO     | monitor loop #267: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:53,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:53,371 | INFO     | time since job start (3258s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:55,384 | INFO     | time since job start (3260s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:55,856 | INFO     | monitor loop #268: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:55,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:57,391 | INFO     | time since job start (3262s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:00:58,366 | INFO     | monitor loop #269: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:00:58,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:00:59,398 | INFO     | time since job start (3264s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:01:00,876 | INFO     | monitor loop #270: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:01:00,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:01:01,404 | INFO     | time since job start (3266s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:01:03,390 | INFO     | monitor loop #271: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:01:03,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:01:03,411 | INFO     | time since job start (3268s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:01:03,411 | INFO     | 3272s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-22 02:14:45] 2026-01-22 01:01:05,420 | INFO     | time since job start (3270s) is within the limit (349056.0s)
[2026-01-22 02:14:45] 2026-01-22 01:01:05,894 | INFO     | monitor loop #272: job 0:6969274744 is in state 'finished'
[2026-01-22 02:14:45] 2026-01-22 01:01:05,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 02:14:45] 2026-01-22 01:01:06,834 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-22 02:14:45] 2026-01-22 01:01:06,880 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2729.404895833333
[2026-01-22 02:14:45] 2026-01-22 01:01:06,910 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6969274744/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 02:14:45] 2026-01-22 01:01:06,910 | INFO     | extracted standard info from prmon json
[2026-01-22 02:14:45] 2026-01-22 01:01:06,910 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 02:14:45] 2026-01-22 01:01:06,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 02:14:45] 2026-01-22 01:01:06,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 02:14:45] 2026-01-22 01:01:06,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 02:14:45] 2026-01-22 01:01:06,916 | INFO     | fitting pss+swap vs Time
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | sum of square deviations: 24640462.0
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | sum of deviations: 2422045016.0
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | mean x: 1769042193.0
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | mean y: 2778318.488372093
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | intersect: -173885999686.13507
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | chi2: 0.08397394297306075
[2026-01-22 02:14:45] 2026-01-22 01:01:06,917 | INFO     | current memory leak: 98.30 B/s (using 43 data points, chi2=0.08)
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | could have reported an average CPU frequency of 2722 MHz (5 samples)
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | ..............................
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . Timing measurements:
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . get job = 0 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . initial setup = 4 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . payload setup = 62 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . stage-in = 0 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . payload execution = 3048 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,918 | INFO     | . stage-out = 2 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,919 | INFO     | . log creation = 0 s
[2026-01-22 02:14:45] 2026-01-22 01:01:06,919 | INFO     | ..............................
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | 
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | job summary report
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | --------------------------------------------------
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | PanDA job id: 6969274744
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | task id: 48215263
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | errors: (none)
[2026-01-22 02:14:45] 2026-01-22 01:01:07,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 02:14:45] 2026-01-22 01:01:07,651 | INFO     | pilot state: finished 
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | transexitcode: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | exeerrorcode: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | exeerrordiag: 
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | exitcode: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | exitmsg: OK
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | cpuconsumptiontime: 25311 s
[2026-01-22 02:14:45] 2026-01-22 01:01:07,666 | INFO     | nevents: 400
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | neventsw: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | pid: 3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | pgrp: 3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | corecount: 12
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | event service: False
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | sizes: {0: 2283719, 1: 2283974, 2: 2284002, 12: 2284002, 23: 2284030, 34: 2284058, 45: 2284504, 56: 2284504, 3114: 2310038, 3116: 2319038, 3119: 2319094, 3167: 231
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | --------------------------------------------------
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | 
[2026-01-22 02:14:45] 2026-01-22 01:01:07,667 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2026-01-22 02:14:45] 2026-01-22 01:01:07,738 | INFO     | PID=3299157 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 02:14:45] 2026-01-22 01:01:07,738 | INFO     | .. there are 22 such processes running
[2026-01-22 02:14:45] 2026-01-22 01:01:07,816 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,816 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,816 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,816 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | job 6969274744 has completed (purged errors)
[2026-01-22 02:14:45] 2026-01-22 01:01:07,818 | INFO     | overall cleanup function is called
[2026-01-22 02:14:45] 2026-01-22 01:01:08,833 | INFO     | --- collectZombieJob: --- 10, [3332823]
[2026-01-22 02:14:45] 2026-01-22 01:01:08,833 | INFO     | zombie collector waiting for pid 3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:08,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 02:14:45] 2026-01-22 01:01:08,833 | INFO     | collected zombie processes
[2026-01-22 02:14:45] 2026-01-22 01:01:08,833 | INFO     | will attempt to kill all subprocesses of pid=3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:09,668 | INFO     | process IDs to be killed: [3332823] (in reverse order)
[2026-01-22 02:14:45] 2026-01-22 01:01:09,971 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 02:14:45] 2026-01-22 01:01:09,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 02:14:45] 2026-01-22 01:01:10,007 | INFO     | did not find any defunct processes belonging to 3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:10,024 | INFO     | did not find any defunct processes belonging to 3332823
[2026-01-22 02:14:45] 2026-01-22 01:01:10,024 | INFO     | ready for new job
[2026-01-22 02:14:45] 2026-01-22 01:01:10,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 02:14:45] 2026-01-22 01:01:10,026 | INFO     | ***************************************
[2026-01-22 02:14:45] 2026-01-22 01:01:10,026 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-22 02:14:45] 2026-01-22 01:01:10,026 | INFO     | ***************************************
[2026-01-22 02:14:45] 2026-01-22 01:01:10,027 | INFO     | 
[2026-01-22 02:14:45] 2026-01-22 01:01:10,033 | INFO     | architecture information:
[2026-01-22 02:14:45] 2026-01-22 01:01:10,033 | INFO     | executing command: cat /etc/os-release
[2026-01-22 02:14:45] 2026-01-22 01:01:10,118 | INFO     | cat /etc/os-release:
[2026-01-22 02:14:45] NAME="CentOS Linux"
[2026-01-22 02:14:45] VERSION="7 (Core)"
[2026-01-22 02:14:45] ID="centos"
[2026-01-22 02:14:45] ID_LIKE="rhel fedora"
[2026-01-22 02:14:45] VERSION_ID="7"
[2026-01-22 02:14:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 02:14:45] ANSI_COLOR="0;31"
[2026-01-22 02:14:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 02:14:45] HOME_URL="https://www.centos.org/"
[2026-01-22 02:14:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 02:14:45] 
[2026-01-22 02:14:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 02:14:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 02:14:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 02:14:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 02:14:45] 
[2026-01-22 02:14:45] 2026-01-22 01:01:10,118 | INFO     | ***************************************
[2026-01-22 02:14:45] 2026-01-22 01:01:10,622 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-01-22 02:14:45] 2026-01-22 01:01:10,714 | INFO     | sufficient remaining disk space (1633217937408 B)
[2026-01-22 02:14:45] 2026-01-22 01:01:10,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 02:14:45] 2026-01-22 01:01:10,715 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 02:14:45] 2026-01-22 01:01:10,715 | INFO     | update_server=False
[2026-01-22 02:14:45] 2026-01-22 01:01:10,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 02:14:45] 2026-01-22 01:01:10,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 02:14:45] 2026-01-22 01:01:10,900 | INFO     | all job control threads have been joined
[2026-01-22 02:14:45] 2026-01-22 01:01:10,925 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-22 02:14:45] 2026-01-22 01:01:10,925 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-22 02:14:45] 2026-01-22 01:01:10,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 02:14:45] 2026-01-22 01:01:10,925 | INFO     | will abort loop
[2026-01-22 02:14:45] 2026-01-22 01:01:11,052 | INFO     | all data control threads have been joined
[2026-01-22 02:14:45] 2026-01-22 01:01:11,721 | INFO     | [job] retrieve thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:11,897 | INFO     | [payload] failed_post thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:11,906 | INFO     | [job] control thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:11,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 02:14:45] 2026-01-22 01:01:11,938 | INFO     | [job] job monitor thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:12,048 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:12,059 | INFO     | [data] control thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:12,164 | INFO     | all payload control threads have been joined
[2026-01-22 02:14:45] 2026-01-22 01:01:12,167 | INFO     | [job] validate thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:12,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 02:14:45] 2026-01-22 01:01:12,539 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:12,887 | INFO     | [payload] validate_post thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:13,077 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:13,097 | INFO     | [data] copytool_in thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:13,170 | INFO     | [payload] control thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:13,205 | INFO     | [job] queue monitor thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:13,933 | INFO     | [data] copytool_out thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:14,725 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:21,536 | INFO     | job.realtimelogging is not enabled
[2026-01-22 02:14:45] 2026-01-22 01:01:22,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 02:14:45] 2026-01-22 01:01:40,669 | INFO     | [monitor] cgroup control has ended
[2026-01-22 02:14:45] 2026-01-22 01:01:40,849 | INFO     | PID=3299157 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 02:14:45] 2026-01-22 01:01:40,849 | INFO     | .. there are 22 such processes running
[2026-01-22 02:14:45] 2026-01-22 01:01:40,850 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 02:14:45] 2026-01-22 01:01:40,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 02:14:45] 2026-01-22 01:01:40,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 02:14:45] 2026-01-22 01:01:41,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262258116416)>', '<ExcThread(monitor, started 140261904586496)>']
[2026-01-22 02:14:45] 2026-01-22 01:01:42,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 02:14:45] 2026-01-22 01:01:42,862 | INFO     | [monitor] control thread has ended
[2026-01-22 02:14:45] 2026-01-22 01:01:47,016 | INFO     | all workflow threads have been joined
[2026-01-22 02:14:45] 2026-01-22 01:01:47,016 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 02:14:45] 2026-01-22 01:01:47,016 | INFO     | traces error code: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:47,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 02:14:45] 2026-01-22 01:01:47,368 [wrapper] ==== pilot stdout END ====
[2026-01-22 02:14:45] 2026-01-22 01:01:47,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 02:14:45] 2026-01-22 01:01:47,444 [wrapper] pilotpid: 3299157
[2026-01-22 02:14:45] 2026-01-22 01:01:47,483 [wrapper] Pilot exit status: 0
[2026-01-22 02:14:45] 2026-01-22 01:01:47,575 [wrapper] pandaids: 6969274744
[2026-01-22 02:14:45] 2026-01-22 01:01:47,945 [wrapper] cleanup supervisor_pilot 3408227 3299158
[2026-01-22 02:14:45] 2026-01-22 01:01:47,981 [wrapper] Test setup, not cleaning
[2026-01-22 02:14:45] 2026-01-22 01:01:48,024 [wrapper] apfmon messages muted
[2026-01-22 02:14:45] 2026-01-22 01:01:48,063 [wrapper] ==== wrapper stdout END ====
[2026-01-22 02:14:45] 2026-01-22 01:01:48,100 [wrapper] ==== wrapper stderr END ====
[2026-01-22 02:14:45]  *** Error codes and diagnostics ***
[2026-01-22 02:14:45]     "exeErrorCode": 0,
[2026-01-22 02:14:45]     "exeErrorDiag": "",
[2026-01-22 02:14:45]     "pilotErrorCode": 0,
[2026-01-22 02:14:45]     "pilotErrorDiag": "",
[2026-01-22 02:14:45]  *** Listing of results directory ***
[2026-01-22 02:14:45] total 732492
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc    579449 Jan 14 00:46 pilot3.tar.gz
[2026-01-22 02:14:45] -rwx------ 1 boinc boinc     36322 Jan 14 00:50 runpilot2-wrapper.sh
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc      5112 Jan 14 00:57 queuedata.json
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc       100 Jan 22 00:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 02:14:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 22 00:42 run_atlas
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc       105 Jan 22 00:42 job.xml
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc 594784788 Jan 22 00:42 EVNT.32794306._000348.pool.root.1
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc      6676 Jan 22 00:42 init_data.xml
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc     15847 Jan 22 00:42 start_atlas.sh
[2026-01-22 02:14:45] drwxrwx--x 2 boinc boinc      4096 Jan 22 00:42 shared
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc    592396 Jan 22 00:42 input.tar.gz
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc         0 Jan 22 00:42 boinc_lockfile
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc      2505 Jan 22 01:04 pandaJob.out
[2026-01-22 02:14:45] -rw------- 1 boinc boinc   1002771 Jan 22 01:06 agis_schedconf.cvmfs.json
[2026-01-22 02:14:45] -rw------- 1 boinc boinc   1516246 Jan 22 01:06 agis_ddmendpoints.agis.ALL.json
[2026-01-22 02:14:45] drwx------ 5 boinc boinc      4096 Jan 22 01:06 pilot3
[2026-01-22 02:14:45] -rw------- 1 boinc boinc 149653325 Jan 22 01:59 HITS.48215263._008690.pool.root.1
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc       528 Jan 22 01:59 boinc_task_state.xml
[2026-01-22 02:14:45] -rw------- 1 boinc boinc      1020 Jan 22 02:00 memory_monitor_summary.json
[2026-01-22 02:14:45] -rw------- 1 boinc boinc    365400 Jan 22 02:00 log.48215263._008690.job.log.tgz.1
[2026-01-22 02:14:45] -rw------- 1 boinc boinc      7770 Jan 22 02:01 heartbeat.json
[2026-01-22 02:14:45] -rw------- 1 boinc boinc        95 Jan 22 02:01 pilot_heartbeat.json
[2026-01-22 02:14:45] -rw------- 1 boinc boinc      5085 Jan 22 02:01 pilotlog.txt
[2026-01-22 02:14:45] -rw------- 1 boinc boinc    484002 Jan 22 02:01 log.48215263._008690.job.log.1
[2026-01-22 02:14:45] -rw------- 1 boinc boinc       357 Jan 22 02:01 output.list
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc       620 Jan 22 02:01 runtime_log
[2026-01-22 02:14:45] -rw------- 1 boinc boinc    870400 Jan 22 02:01 result.tar.gz
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc      8880 Jan 22 02:01 runtime_log.err
[2026-01-22 02:14:45] -rw------- 1 boinc boinc       661 Jan 22 02:01 eC7MDm4K3z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlWpKDmuYgWgm.diag
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc        25 Jan 22 02:14 wrapper_checkpoint.txt
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc      8192 Jan 22 02:14 boinc_mmap_file
[2026-01-22 02:14:45] -rw-r--r-- 1 boinc boinc     22487 Jan 22 02:14 stderr.txt
[2026-01-22 02:14:45] HITS file was successfully produced:
[2026-01-22 02:14:45] -rw------- 1 boinc boinc 149653325 Jan 22 01:59 shared/HITS.pool.root.1
[2026-01-22 02:14:45]  *** Contents of shared directory: ***
[2026-01-22 02:14:45] total 728452
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc 594784788 Jan 22 00:42 ATLAS.root_0
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc     15847 Jan 22 00:42 start_atlas.sh
[2026-01-22 02:14:45] -rw-r--r-- 2 boinc boinc    592396 Jan 22 00:42 input.tar.gz
[2026-01-22 02:14:45] -rw------- 1 boinc boinc 149653325 Jan 22 01:59 HITS.pool.root.1
[2026-01-22 02:14:45] -rw------- 1 boinc boinc    870400 Jan 22 02:01 result.tar.gz
02:14:47 (3251672): run_atlas exited; CPU time 25410.146696
02:14:47 (3251672): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN