Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-27 05:52:45 (3924037): vboxwrapper version 26210
2026-01-27 05:52:45 (3924037): BOINC client version: 7.24.1
2026-01-27 05:52:46 (3924037): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-01-27 05:52:46 (3924037): Successfully copied 'init_data.xml' to the shared directory.
2026-01-27 05:52:46 (3924037): Create VM. (boinc_cdb077376ec4f721, slot#0)
2026-01-27 05:52:46 (3924037): Setting Memory Size for VM. (4100MB)
2026-01-27 05:52:46 (3924037): Setting CPU Count for VM. (1)
2026-01-27 05:52:46 (3924037): Setting Chipset Options for VM.
2026-01-27 05:52:46 (3924037): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-27 05:52:46 (3924037): Setting Boot Options for VM.
2026-01-27 05:52:46 (3924037): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-27 05:52:46 (3924037): Enabling VM Network Access.
2026-01-27 05:52:46 (3924037): Disabling USB Support for VM.
2026-01-27 05:52:47 (3924037): Disabling COM Port Support for VM.
2026-01-27 05:52:47 (3924037): Disabling LPT Port Support for VM.
2026-01-27 05:52:47 (3924037): Disabling Audio Support for VM.
2026-01-27 05:52:47 (3924037): Disabling Clipboard Support for VM.
2026-01-27 05:52:47 (3924037): Disabling Drag and Drop Support for VM.
2026-01-27 05:52:47 (3924037): Adding storage controller(s) to VM.
2026-01-27 05:52:47 (3924037): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-27 05:52:48 (3924037): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-27 05:52:48 (3924037): forwarding host port 51301 to guest port 80
2026-01-27 05:52:48 (3924037): Enabling remote desktop for VM.
2026-01-27 05:52:48 (3924037): Required extension pack not installed, remote desktop not enabled.
2026-01-27 05:52:48 (3924037): Enabling shared directory for VM.
2026-01-27 05:52:48 (3924037): Starting VM using VBoxManage interface. (boinc_cdb077376ec4f721, slot#0)
2026-01-27 05:52:49 (3924037): Successfully started VM. (PID = '3924517')
2026-01-27 05:52:49 (3924037): Reporting VM Process ID to BOINC.
2026-01-27 05:52:49 (3924037): Guest Log: BIOS: VirtualBox 7.0.16
2026-01-27 05:52:49 (3924037): Guest Log: CPUID EDX: 0x178bfbff
2026-01-27 05:52:49 (3924037): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-27 05:52:49 (3924037): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-27 05:52:49 (3924037): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-27 05:52:49 (3924037): Detected: Web Application Enabled (http://localhost:51301)
2026-01-27 05:52:49 (3924037): Preference change detected
2026-01-27 05:52:49 (3924037): Setting CPU throttle for VM. (100%)
2026-01-27 05:52:49 (3924037): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 05:52:51 (3924037): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-27 05:52:51 (3924037): Guest Log: BIOS: Booting from Hard Disk...
2026-01-27 05:52:54 (3924037): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-27 05:52:54 (3924037): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-27 05:52:54 (3924037): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-27 05:52:58 (3924037): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-27 05:52:58 (3924037): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-27 05:53:08 (3924037): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000163 main     Log opened 2026-01-27T04:53:06.227006000Z
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000328 main     OS Product: Linux
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000358 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000379 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000400 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000400 main     Process ID: 1257
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.000401 main     Package type: LINUX_64BITS_GENERIC
2026-01-27 05:53:08 (3924037): Guest Log: 00:00:00.001908 main     5.2.32 r132073 started. Verbose level = 0
2026-01-27 05:53:08 (3924037): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-27 05:53:08 (3924037): Guest Log: [INFO] Mounting shared directory
2026-01-27 05:53:08 (3924037): Guest Log: [INFO] Checking for init_data.xml
2026-01-27 05:53:11 (3924037): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-27 05:53:11 (3924037): Guest Log: [INFO] Detected branch: prod
2026-01-27 05:53:12 (3924037): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-27 05:53:12 (3924037): Guest Log: Copying input files
2026-01-27 05:53:13 (3924037): Guest Log: Copied input files into RunAtlas.
2026-01-27 05:53:13 (3924037): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-27 05:53:13 (3924037): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-27 05:53:13 (3924037): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-27 05:53:13 (3924037): Guest Log: Further information can be found at the LHC@home message board.
2026-01-27 05:53:22 (3924037): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-27 05:53:22 (3924037): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-27 05:53:22 (3924037): Guest Log: 2.6.3.0 1526 0 30060 155573 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-27 05:53:23 (3924037): Guest Log: copied the webapp to /var/www
2026-01-27 05:53:23 (3924037): Guest Log: core_number=1
2026-01-27 05:53:23 (3924037): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-27 05:53:23 (3924037): Guest Log:  *** Starting ATLAS job. (PandaID=6977224065 taskID=48299653) ***
2026-01-27 07:31:50 (3924037): Status Report: Elapsed Time: '6000.000000'
2026-01-27 07:31:50 (3924037): Status Report: CPU Time: '5730.950000'
2026-01-27 09:10:50 (3924037): Status Report: Elapsed Time: '12000.000000'
2026-01-27 09:10:50 (3924037): Status Report: CPU Time: '11663.290000'
2026-01-27 10:49:51 (3924037): Status Report: Elapsed Time: '18000.000000'
2026-01-27 10:49:51 (3924037): Status Report: CPU Time: '17603.040000'
2026-01-27 12:28:51 (3924037): Status Report: Elapsed Time: '24000.000000'
2026-01-27 12:28:51 (3924037): Status Report: CPU Time: '23543.180000'
2026-01-27 14:07:52 (3924037): Status Report: Elapsed Time: '30000.000000'
2026-01-27 14:07:52 (3924037): Status Report: CPU Time: '29483.620000'
2026-01-27 15:46:52 (3924037): Status Report: Elapsed Time: '36000.000000'
2026-01-27 15:46:52 (3924037): Status Report: CPU Time: '35423.190000'
2026-01-27 17:25:53 (3924037): Status Report: Elapsed Time: '42000.000000'
2026-01-27 17:25:53 (3924037): Status Report: CPU Time: '41363.290000'
2026-01-27 19:04:53 (3924037): Status Report: Elapsed Time: '48000.000000'
2026-01-27 19:04:53 (3924037): Status Report: CPU Time: '47303.450000'
2026-01-27 20:43:54 (3924037): Status Report: Elapsed Time: '54000.000000'
2026-01-27 20:43:54 (3924037): Status Report: CPU Time: '53242.360000'
2026-01-27 20:47:59 (3924037): Guest Log:  *** Job finished ***
2026-01-27 20:47:59 (3924037): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:27,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:27,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:52,222 | INFO     | [monitor] cgroup control has ended
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:52,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933597591360)>', '<ExcThread(monitor, started 139933146654464)>']
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:53,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:53,431 | INFO     | [monitor] control thread has ended
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,440 | INFO     | all workflow threads have been joined
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,440 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,440 | INFO     | traces error code: 0
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,531 [wrapper] ==== pilot stdout END ====
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,534 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,538 [wrapper] pilotpid: 5872
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:57,542 [wrapper] Pilot exit status: 0
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,733 [wrapper] pandaids: 6977224065
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,753 [wrapper] cleanup supervisor_pilot  6992 5873
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,758 [wrapper] Test setup, not cleaning
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,761 [wrapper] apfmon messages muted
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,765 [wrapper] ==== wrapper stdout END ====
2026-01-27 20:47:59 (3924037): Guest Log: 2026-01-27 19:47:58,769 [wrapper] ==== wrapper stderr END ====
2026-01-27 20:47:59 (3924037): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 20:47:59 (3924037): Guest Log:     "exeErrorCode": 0,
2026-01-27 20:47:59 (3924037): Guest Log:     "exeErrorDiag": "",
2026-01-27 20:47:59 (3924037): Guest Log:     "pilotErrorCode": 0,
2026-01-27 20:47:59 (3924037): Guest Log:     "pilotErrorDiag": "",
2026-01-27 20:47:59 (3924037): Guest Log:  *** Listing of results directory ***
2026-01-27 20:47:59 (3924037): Guest Log: total 186000
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 21 06:41 pilot3.tar.gz
2026-01-27 20:47:59 (3924037): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 21 06:45 runpilot2-wrapper.sh
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 21 06:47 queuedata.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas    597777 Jan 27 04:53 input.tar.gz
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Jan 27 04:53 start_atlas.sh
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas      6532 Jan 27 04:53 init_data.xml
2026-01-27 20:47:59 (3924037): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 27 04:53 EVNT.48299651._000014.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas      2628 Jan 27 04:53 pandaJob.out
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas   1006441 Jan 27 04:54 agis_schedconf.cvmfs.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas       427 Jan 27 04:54 workernode_map.json
2026-01-27 20:47:59 (3924037): Guest Log: drwx------. 5 atlas atlas      4096 Jan 27 04:54 pilot3
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas 170166230 Jan 27 19:45 HITS.48299653._000334.pool.root.1
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas      1024 Jan 27 19:46 memory_monitor_summary.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 19:46 agis_ddmendpoints.agis.ALL.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas    876205 Jan 27 19:46 log.48299653._000334.job.log.tgz.1
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas      6364 Jan 27 19:46 heartbeat.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 19:47 pilot_heartbeat.json
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 27 19:47 pilotlog.txt
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas   7342488 Jan 27 19:47 log.48299653._000334.job.log.1
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 19:47 output.list
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 19:47 runtime_log
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas   8232960 Jan 27 19:47 result.tar.gz
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 atlas atlas      8634 Jan 27 19:47 runtime_log.err
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas       658 Jan 27 19:47 4ajNDm18g28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnEyKDmwEw2fm.diag
2026-01-27 20:47:59 (3924037): Guest Log: Looking for outputfile HITS.48299653._000334.pool.root.1
2026-01-27 20:47:59 (3924037): Guest Log: HITS file was successfully produced
2026-01-27 20:47:59 (3924037): Guest Log: -rw-------. 1 atlas atlas 170166230 Jan 27 19:45 /home/atlas/RunAtlas/HITS.48299653._000334.pool.root.1
2026-01-27 20:47:59 (3924037): Guest Log: Successfully finished the ATLAS job!
2026-01-27 20:47:59 (3924037): Guest Log: Copying the results back to the shared directory!
2026-01-27 20:47:59 (3924037): Guest Log:  *** Contents of shared directory: ***
2026-01-27 20:47:59 (3924037): Guest Log: total 255428
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 root root 252696090 Jan 27 04:52 ATLAS.root_0
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 root root      6532 Jan 27 04:52 init_data.xml
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 root root    597777 Jan 27 04:52 input.tar.gz
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 root root   8232960 Jan 27 19:47 result.tar.gz
2026-01-27 20:47:59 (3924037): Guest Log: -rw-r--r--. 1 root root     15845 Jan 27 04:52 start_atlas.sh
2026-01-27 20:47:59 (3924037): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 20:47:59 (3924037): VM Completion File Detected.
2026-01-27 20:47:59 (3924037): Powering off VM.
2026-01-27 20:48:00 (3924037): Successfully stopped VM.
2026-01-27 20:48:00 (3924037): Deregistering VM. (boinc_cdb077376ec4f721, slot#0)
2026-01-27 20:48:00 (3924037): Removing network bandwidth throttle group from VM.
2026-01-27 20:48:00 (3924037): Removing VM from VirtualBox.
2026-01-27 20:48:05 (3924037): called boinc_finish(0)

</stderr_txt>
]]>

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