Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
08:20:46 (287259): wrapper (7.7.26015): starting
08:20:46 (287259): wrapper: running run_atlas (--nthreads 12)
[2026-01-21 08:20:46] Arguments: --nthreads 12
[2026-01-21 08:20:46] Threads: 12
[2026-01-21 08:20:46] Checking for CVMFS
[2026-01-21 08:20:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 08:20:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 08:20:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 08:20:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 08:20:48] 2.12.7.0 196394 94 50596 155387 2 188 2651349 4194304 1407 130560 13 195340 99.094 141287 251 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-21 08:20:48] CVMFS is ok
[2026-01-21 08:20:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 08:20:48] Checking for apptainer binary...
[2026-01-21 08:20:48] apptainer is not installed, using version from CVMFS
[2026-01-21 08:20:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 08:20:48] Trebeth
[2026-01-21 08:20:48] apptainer works
[2026-01-21 08:20:48] Set ATHENA_PROC_NUMBER=12
[2026-01-21 08:20:48] Set ATHENA_CORE_NUMBER=12
[2026-01-21 08:20:48] Starting ATLAS job with PandaID=6977055598
[2026-01-21 08:20:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 09:22:15]  *** The last 200 lines of the pilot log: ***
[2026-01-21 09:22:15]  guid=4310057e-ebcc-481b-8018-99a051b6ce83
[2026-01-21 09:22:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-21 09:22:15]  is_altstaged=None
[2026-01-21 09:22:15]  is_tar=False
[2026-01-21 09:22:15]  lfn=log.48299557._000046.job.log.tgz.1
[2026-01-21 09:22:15]  mtime=0
[2026-01-21 09:22:15]  protocol_id=None
[2026-01-21 09:22:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 09:22:15]  replicas=None
[2026-01-21 09:22:15]  scope=mc23_13p6TeV
[2026-01-21 09:22:15]  status=None
[2026-01-21 09:22:15]  status_code=0
[2026-01-21 09:22:15]  storage_token=
[2026-01-21 09:22:15]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6977055598/log.48299557._000046.job.log.tgz.1
[2026-01-21 09:22:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/68/log.48299557._000046.job.log.tgz.1
[2026-01-21 09:22:15]  workdir=None
[2026-01-21 09:22:15] ]
[2026-01-21 09:22:15] 2026-01-21 14:21:28,256 | INFO     | transferring file log.48299557._000046.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6977055598/log.48299557._000046.job.log.tgz.1 to /var/lib/boinc
[2026-01-21 09:22:15] 2026-01-21 14:21:28,256 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6977055598/log.48299557._000046.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.482995
[2026-01-21 09:22:15] 2026-01-21 14:21:28,268 | INFO     | adding to output.list: log.48299557._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/68/log.48299557._000046.job.log.tg
[2026-01-21 09:22:15] 2026-01-21 14:21:28,269 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 09:22:15] 2026-01-21 14:21:28,269 | INFO     | summary of transferred files:
[2026-01-21 09:22:15] 2026-01-21 14:21:28,269 | INFO     |  -- lfn=log.48299557._000046.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 09:22:15] 2026-01-21 14:21:28,269 | INFO     | stage-out finished correctly
[2026-01-21 09:22:15] 2026-01-21 14:21:29,205 | INFO     | time since job start (3626s) is within the limit (349056.0s)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,779 | INFO     | monitor loop #274: job 0:6977055598 is in state 'finished'
[2026-01-21 09:22:15] 2026-01-21 14:21:29,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,791 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 09:22:15] 2026-01-21 14:21:29,874 | INFO     | job 6977055598 has state=finished
[2026-01-21 09:22:15] 2026-01-21 14:21:29,874 | INFO     | preparing for final server update for job 6977055598 in state='finished'
[2026-01-21 09:22:15] 2026-01-21 14:21:29,874 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6977055598/jobReport.json
[2026-01-21 09:22:15] 2026-01-21 14:21:29,876 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-21 09:22:15] 2026-01-21 14:21:29,876 | INFO     | this job has now completed (state=finished)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,876 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,877 | INFO     | log transfer has been attempted: DONE
[2026-01-21 09:22:15] 2026-01-21 14:21:29,877 | INFO     | job 6977055598 has finished - writing final server update
[2026-01-21 09:22:15] 2026-01-21 14:21:29,877 | INFO     | total number of processed events: 400 (read)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,908 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6977055598/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,909 | INFO     | extracted standard info from prmon json
[2026-01-21 09:22:15] 2026-01-21 14:21:29,909 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 09:22:15] 2026-01-21 14:21:29,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 09:22:15] 2026-01-21 14:21:29,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 09:22:15] 2026-01-21 14:21:29,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 09:22:15] 2026-01-21 14:21:29,911 | INFO     | fitting pss+swap vs Time
[2026-01-21 09:22:15] 2026-01-21 14:21:29,911 | INFO     | sum of square deviations: 46147842.0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,911 | INFO     | sum of deviations: -195386111.00000003
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | mean x: 1769003573.0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | mean y: 2705870.679245283
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | intersect: 7492519337.440586
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | chi2: 0.03960479641027321
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | current memory leak: -4.23 B/s (using 53 data points, chi2=0.04)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,912 | INFO     | could have reported an average CPU frequency of 2216 MHz (6 samples)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | ..............................
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . Timing measurements:
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . get job = 0 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . initial setup = 5 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . payload setup = 4 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . stage-in = 0 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . payload execution = 3605 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . stage-out = 0 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | . log creation = 0 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,913 | INFO     | ..............................
[2026-01-21 09:22:15] 2026-01-21 14:21:29,994 | INFO     | 
[2026-01-21 09:22:15] 2026-01-21 14:21:29,994 | INFO     | job summary report
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | --------------------------------------------------
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | PanDA job id: 6977055598
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | task id: 48299557
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | errors: (none)
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | pilot state: finished 
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | transexitcode: 0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | exeerrorcode: 0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | exeerrordiag: 
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | exitcode: 0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,995 | INFO     | exitmsg: OK
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | cpuconsumptiontime: 37957 s
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | nevents: 400
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | neventsw: 0
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | pid: 302654
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | pgrp: 302654
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | corecount: 12
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | event service: False
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | sizes: {0: 2284122, 1: 2284384, 11: 2284412, 3613: 2310184, 3614: 2319251, 3616: 2319573}
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | --------------------------------------------------
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | 
[2026-01-21 09:22:15] 2026-01-21 14:21:29,996 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | job 6977055598 has completed (purged errors)
[2026-01-21 09:22:15] 2026-01-21 14:21:30,017 | INFO     | overall cleanup function is called
[2026-01-21 09:22:15] 2026-01-21 14:21:31,023 | INFO     | --- collectZombieJob: --- 10, [302654]
[2026-01-21 09:22:15] 2026-01-21 14:21:31,024 | INFO     | zombie collector waiting for pid 302654
[2026-01-21 09:22:15] 2026-01-21 14:21:31,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 09:22:15] 2026-01-21 14:21:31,024 | INFO     | collected zombie processes
[2026-01-21 09:22:15] 2026-01-21 14:21:31,024 | INFO     | will attempt to kill all subprocesses of pid=302654
[2026-01-21 09:22:15] 2026-01-21 14:21:31,220 | INFO     | process IDs to be killed: [302654] (in reverse order)
[2026-01-21 09:22:15] 2026-01-21 14:21:31,272 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 09:22:15] 2026-01-21 14:21:31,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 09:22:15] 2026-01-21 14:21:31,278 | INFO     | did not find any defunct processes belonging to 302654
[2026-01-21 09:22:15] 2026-01-21 14:21:31,284 | INFO     | did not find any defunct processes belonging to 302654
[2026-01-21 09:22:15] 2026-01-21 14:21:31,284 | INFO     | ready for new job
[2026-01-21 09:22:15] 2026-01-21 14:21:31,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 09:22:15] 2026-01-21 14:21:31,285 | INFO     | **************************************
[2026-01-21 09:22:15] 2026-01-21 14:21:31,286 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 09:22:15] 2026-01-21 14:21:31,286 | INFO     | **************************************
[2026-01-21 09:22:15] 2026-01-21 14:21:31,286 | INFO     | 
[2026-01-21 09:22:15] 2026-01-21 14:21:31,310 | INFO     | architecture information:
[2026-01-21 09:22:15] 2026-01-21 14:21:31,311 | INFO     | executing command: cat /etc/os-release
[2026-01-21 09:22:15] 2026-01-21 14:21:31,323 | INFO     | cat /etc/os-release:
[2026-01-21 09:22:15] NAME="CentOS Linux"
[2026-01-21 09:22:15] VERSION="7 (Core)"
[2026-01-21 09:22:15] ID="centos"
[2026-01-21 09:22:15] ID_LIKE="rhel fedora"
[2026-01-21 09:22:15] VERSION_ID="7"
[2026-01-21 09:22:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 09:22:15] ANSI_COLOR="0;31"
[2026-01-21 09:22:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 09:22:15] HOME_URL="https://www.centos.org/"
[2026-01-21 09:22:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 09:22:15] 
[2026-01-21 09:22:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 09:22:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 09:22:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 09:22:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 09:22:15] 
[2026-01-21 09:22:15] 2026-01-21 14:21:31,323 | INFO     | **************************************
[2026-01-21 09:22:15] 2026-01-21 14:21:31,826 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | INFO     | sufficient remaining disk space (391125139456 B)
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | INFO     | update_server=False
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 09:22:15] 2026-01-21 14:21:31,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 09:22:15] 2026-01-21 14:21:31,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 09:22:15] 2026-01-21 14:21:31,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 09:22:15] 2026-01-21 14:21:32,174 | INFO     | all payload control threads have been joined
[2026-01-21 09:22:15] 2026-01-21 14:21:32,251 | INFO     | all data control threads have been joined
[2026-01-21 09:22:15] 2026-01-21 14:21:32,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-21 09:22:15] 2026-01-21 14:21:32,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-21 09:22:15] 2026-01-21 14:21:32,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 09:22:15] 2026-01-21 14:21:32,283 | INFO     | will abort loop
[2026-01-21 09:22:15] 2026-01-21 14:21:32,843 | INFO     | [job] queue monitor thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:32,844 | INFO     | [job] retrieve thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:32,875 | INFO     | all job control threads have been joined
[2026-01-21 09:22:15] 2026-01-21 14:21:33,047 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,180 | INFO     | [payload] control thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,256 | INFO     | [data] control thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,287 | INFO     | [job] job monitor thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,427 | INFO     | [payload] validate_post thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,451 | INFO     | [payload] failed_post thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,835 | INFO     | [job] validate thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,847 | INFO     | [data] copytool_out thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:33,879 | INFO     | [job] control thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:34,091 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:34,229 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:34,243 | INFO     | [data] copytool_in thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:35,848 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:21:42,557 | INFO     | job.realtimelogging is not enabled
[2026-01-21 09:22:15] 2026-01-21 14:21:43,559 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 09:22:15] 2026-01-21 14:22:02,577 | INFO     | PID=291640 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-21 09:22:15] 2026-01-21 14:22:02,577 | INFO     | .. there are 4 such processes running
[2026-01-21 09:22:15] 2026-01-21 14:22:02,578 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 09:22:15] 2026-01-21 14:22:02,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 09:22:15] 2026-01-21 14:22:02,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 09:22:15] 2026-01-21 14:22:08,471 | INFO     | [monitor] cgroup control has ended
[2026-01-21 09:22:15] 2026-01-21 14:22:10,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014448863040)>', '<ExcThread(monitor, started 140014138660608)>']
[2026-01-21 09:22:15] 2026-01-21 14:22:10,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 09:22:15] 2026-01-21 14:22:10,612 | INFO     | [monitor] control thread has ended
[2026-01-21 09:22:15] 2026-01-21 14:22:15,076 | INFO     | all workflow threads have been joined
[2026-01-21 09:22:15] 2026-01-21 14:22:15,077 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 09:22:15] 2026-01-21 14:22:15,077 | INFO     | traces error code: 0
[2026-01-21 09:22:15] 2026-01-21 14:22:15,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 09:22:15] 2026-01-21 14:22:15,192 [wrapper] ==== pilot stdout END ====
[2026-01-21 09:22:15] 2026-01-21 14:22:15,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 09:22:15] 2026-01-21 14:22:15,195 [wrapper] pilotpid: 291640
[2026-01-21 09:22:15] 2026-01-21 14:22:15,196 [wrapper] Pilot exit status: 0
[2026-01-21 09:22:15] 2026-01-21 14:22:15,202 [wrapper] pandaids: 6977055598
[2026-01-21 09:22:15] 2026-01-21 14:22:15,230 [wrapper] cleanup supervisor_pilot  353488 291641
[2026-01-21 09:22:15] 2026-01-21 14:22:15,232 [wrapper] Test setup, not cleaning
[2026-01-21 09:22:15] 2026-01-21 14:22:15,233 [wrapper] apfmon messages muted
[2026-01-21 09:22:15] 2026-01-21 14:22:15,235 [wrapper] ==== wrapper stdout END ====
[2026-01-21 09:22:15] 2026-01-21 14:22:15,236 [wrapper] ==== wrapper stderr END ====
[2026-01-21 09:22:15]  *** Error codes and diagnostics ***
[2026-01-21 09:22:15]     "exeErrorCode": 0,
[2026-01-21 09:22:15]     "exeErrorDiag": "",
[2026-01-21 09:22:15]     "pilotErrorCode": 0,
[2026-01-21 09:22:15]     "pilotErrorDiag": "",
[2026-01-21 09:22:15]  *** Listing of results directory ***
[2026-01-21 09:22:15] total 421076
[2026-01-21 09:22:15] -rwx------ 1 boinc boinc     36322 Jan 20 20:23 runpilot2-wrapper.sh
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc    584422 Jan 20 20:23 pilot3.tar.gz
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc      5111 Jan 20 20:24 queuedata.json
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc       100 Jan 21 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 09:22:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 21 08:20 run_atlas
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc       105 Jan 21 08:20 job.xml
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc     15845 Jan 21 08:20 start_atlas.sh
[2026-01-21 09:22:15] drwxrwx--x 2 boinc boinc      4096 Jan 21 08:20 shared
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc    597773 Jan 21 08:20 input.tar.gz
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc      7579 Jan 21 08:20 init_data.xml
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc 260147717 Jan 21 08:20 EVNT.48299555._000002.pool.root.1
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc         0 Jan 21 08:20 boinc_lockfile
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc      2623 Jan 21 08:20 pandaJob.out
[2026-01-21 09:22:15] -rw------- 1 boinc boinc        50 Jan 21 08:20 setup.sh.local
[2026-01-21 09:22:15] -rw------- 1 boinc boinc   1002702 Jan 21 08:20 agis_schedconf.cvmfs.json
[2026-01-21 09:22:15] -rw------- 1 boinc boinc   1516246 Jan 21 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-21 09:22:15] -rw------- 1 boinc boinc       429 Jan 21 08:21 workernode_map.json
[2026-01-21 09:22:15] drwx------ 5 boinc boinc      4096 Jan 21 08:21 pilot3
[2026-01-21 09:22:15] -rw------- 1 boinc boinc 165224129 Jan 21 09:21 HITS.48299557._000046.pool.root.1
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc       529 Jan 21 09:21 boinc_task_state.xml
[2026-01-21 09:22:15] -rw------- 1 boinc boinc      1028 Jan 21 09:21 memory_monitor_summary.json
[2026-01-21 09:22:15] -rw------- 1 boinc boinc    381713 Jan 21 09:21 log.48299557._000046.job.log.tgz.1
[2026-01-21 09:22:15] -rw------- 1 boinc boinc      6326 Jan 21 09:21 heartbeat.json
[2026-01-21 09:22:15] -rw------- 1 boinc boinc        95 Jan 21 09:22 pilot_heartbeat.json
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc      8192 Jan 21 09:22 boinc_mmap_file
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc        27 Jan 21 09:22 wrapper_checkpoint.txt
[2026-01-21 09:22:15] -rw------- 1 boinc boinc      5084 Jan 21 09:22 pilotlog.txt
[2026-01-21 09:22:15] -rw------- 1 boinc boinc    552165 Jan 21 09:22 log.48299557._000046.job.log.1
[2026-01-21 09:22:15] -rw------- 1 boinc boinc       357 Jan 21 09:22 output.list
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc       620 Jan 21 09:22 runtime_log
[2026-01-21 09:22:15] -rw------- 1 boinc boinc    952320 Jan 21 09:22 result.tar.gz
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc      9403 Jan 21 09:22 runtime_log.err
[2026-01-21 09:22:15] -rw------- 1 boinc boinc       650 Jan 21 09:22 8btNDm47b28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDJxKDm2AbT0m.diag
[2026-01-21 09:22:15] -rw-r--r-- 1 boinc boinc     21075 Jan 21 09:22 stderr.txt
[2026-01-21 09:22:15] HITS file was successfully produced:
[2026-01-21 09:22:15] -rw------- 1 boinc boinc 165224129 Jan 21 09:21 shared/HITS.pool.root.1
[2026-01-21 09:22:15]  *** Contents of shared directory: ***
[2026-01-21 09:22:15] total 416944
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc     15845 Jan 21 08:20 start_atlas.sh
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc    597773 Jan 21 08:20 input.tar.gz
[2026-01-21 09:22:15] -rw-r--r-- 2 boinc boinc 260147717 Jan 21 08:20 ATLAS.root_0
[2026-01-21 09:22:15] -rw------- 1 boinc boinc 165224129 Jan 21 09:21 HITS.pool.root.1
[2026-01-21 09:22:15] -rw------- 1 boinc boinc    952320 Jan 21 09:22 result.tar.gz
09:22:17 (287259): run_atlas exited; CPU time 38022.446717
09:22:17 (287259): called boinc_finish(0)

</stderr_txt>
]]>

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