Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-21 11:08:55 (19596): vboxwrapper version 26210
2026-01-21 11:08:55 (19596): BOINC client version: 7.16.5
2026-01-21 11:08:56 (19596): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-01-21 11:08:56 (19596): Successfully copied 'init_data.xml' to the shared directory.
2026-01-21 11:08:56 (19596): Create VM. (boinc_4aabb590e151e959, slot#2)
2026-01-21 11:08:57 (19596): Setting Memory Size for VM. (4400MB)
2026-01-21 11:08:57 (19596): Setting CPU Count for VM. (4)
2026-01-21 11:08:57 (19596): Setting Chipset Options for VM.
2026-01-21 11:08:58 (19596): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-21 11:08:58 (19596): Setting Boot Options for VM.
2026-01-21 11:08:58 (19596): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-21 11:08:59 (19596): Enabling VM Network Access.
2026-01-21 11:08:59 (19596): Disabling USB Support for VM.
2026-01-21 11:08:59 (19596): Disabling COM Port Support for VM.
2026-01-21 11:08:59 (19596): Disabling LPT Port Support for VM.
2026-01-21 11:09:00 (19596): Disabling Audio Support for VM.
2026-01-21 11:09:00 (19596): Disabling Clipboard Support for VM.
2026-01-21 11:09:00 (19596): Disabling Drag and Drop Support for VM.
2026-01-21 11:09:01 (19596): Adding storage controller(s) to VM.
2026-01-21 11:09:01 (19596): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-21 11:09:01 (19596): Adding VirtualBox Guest Additions to VM.
2026-01-21 11:09:02 (19596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-21 11:09:02 (19596): forwarding host port 50800 to guest port 80
2026-01-21 11:09:02 (19596): Enabling remote desktop for VM.
2026-01-21 11:09:03 (19596): Enabling shared directory for VM.
2026-01-21 11:09:03 (19596): Starting VM using VBoxManage interface. (boinc_4aabb590e151e959, slot#2)
2026-01-21 11:09:08 (19596): Successfully started VM. (PID = '9436')
2026-01-21 11:09:08 (19596): Reporting VM Process ID to BOINC.
2026-01-21 11:09:08 (19596): Guest Log: BIOS: VirtualBox 5.2.44
2026-01-21 11:09:08 (19596): Guest Log: CPUID EDX: 0x178bfbff
2026-01-21 11:09:08 (19596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-21 11:09:08 (19596): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-21 11:09:08 (19596): Detected: Web Application Enabled (http://localhost:50800)
2026-01-21 11:09:08 (19596): Detected: Remote Desktop Enabled (localhost:50801)
2026-01-21 11:09:08 (19596): Preference change detected
2026-01-21 11:09:08 (19596): Setting CPU throttle for VM. (100%)
2026-01-21 11:09:08 (19596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-21 11:09:10 (19596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-21 11:09:10 (19596): Guest Log: BIOS: Booting from Hard Disk...
2026-01-21 11:09:13 (19596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-21 11:09:13 (19596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-21 11:09:13 (19596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-21 11:09:18 (19596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-21 11:09:18 (19596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-21 11:09:25 (19596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000178 main     Log opened 2026-01-21T11:09:23.100486000Z
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000283 main     OS Product: Linux
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000323 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000353 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000388 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000389 main     Process ID: 1307
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.000389 main     Package type: LINUX_64BITS_GENERIC
2026-01-21 11:09:25 (19596): Guest Log: 00:00:00.001350 main     5.2.32 r132073 started. Verbose level = 0
2026-01-21 11:09:25 (19596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-21 11:09:25 (19596): Guest Log: [INFO] Mounting shared directory
2026-01-21 11:09:25 (19596): Guest Log: [INFO] Checking for init_data.xml
2026-01-21 11:09:29 (19596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-21 11:09:29 (19596): Guest Log: [INFO] Detected branch: prod
2026-01-21 11:09:29 (19596): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-21 11:09:29 (19596): Guest Log: Copying input files
2026-01-21 11:09:31 (19596): Guest Log: Copied input files into RunAtlas.
2026-01-21 11:09:31 (19596): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-21 11:09:31 (19596): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-21 11:09:31 (19596): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-21 11:09:31 (19596): Guest Log: Further information can be found at the LHC@home message board.
2026-01-21 11:09:35 (19596): Guest Log: 00:00:10.004056 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 560 452 000ns (GuestNow=1 768 986 574 543 435 000 ns GuestLast=1 768 993 763 103 887 000 ns fSetTimeLastLoop=true )
2026-01-21 11:09:40 (19596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-21 11:09:40 (19596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-21 11:09:40 (19596): Guest Log: 2.6.3.0 1581 0 32180 155378 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-21 11:09:41 (19596): Guest Log: copied the webapp to /var/www
2026-01-21 11:09:41 (19596): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-21 11:09:41 (19596): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-21 11:09:41 (19596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-21 11:09:41 (19596): Guest Log:  *** Starting ATLAS job. (PandaID=6977146631 taskID=48298283) ***
2026-01-21 11:45:00 (19596): VM state change detected. (old = 'running', new = 'paused')
2026-01-21 11:59:11 (19596): VM state change detected. (old = 'paused', new = 'running')
2026-01-21 13:03:23 (19596): Status Report: Elapsed Time: '6000.000000'
2026-01-21 13:03:23 (19596): Status Report: CPU Time: '21696.968750'
2026-01-21 14:43:28 (19596): Status Report: Elapsed Time: '12000.000000'
2026-01-21 14:43:28 (19596): Status Report: CPU Time: '44980.187500'
2026-01-21 15:02:05 (19596): Guest Log:  *** Job finished ***
2026-01-21 15:02:05 (19596): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,365 | INFO     | PID=5981 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,365 | INFO     | found 0 job(s) in 20 queues
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:56,366 | INFO     | [monitor] control thread has ended
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,272 | INFO     | all workflow threads have been joined
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,272 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,272 | INFO     | traces error code: 0
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,419 [wrapper] ==== pilot stdout END ====
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,424 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,429 [wrapper] pilotpid: 5981
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,433 [wrapper] Pilot exit status: 0
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,480 [wrapper] pandaids: 6977146631
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,510 [wrapper] cleanup supervisor_pilot 24160 5982
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,515 [wrapper] Test setup, not cleaning
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,521 [wrapper] apfmon messages muted
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,526 [wrapper] ==== wrapper stdout END ====
2026-01-21 15:02:05 (19596): Guest Log: 2026-01-21 12:47:59,531 [wrapper] ==== wrapper stderr END ====
2026-01-21 15:02:05 (19596): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 15:02:05 (19596): Guest Log:     "exeErrorCode": 0,
2026-01-21 15:02:05 (19596): Guest Log:     "exeErrorDiag": "",
2026-01-21 15:02:05 (19596): Guest Log:     "pilotErrorCode": 0,
2026-01-21 15:02:05 (19596): Guest Log:     "pilotErrorDiag": "",
2026-01-21 15:02:05 (19596): Guest Log:  *** Listing of results directory ***
2026-01-21 15:02:05 (19596): Guest Log: total 171152
2026-01-21 15:02:05 (19596): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 21 03:26 queuedata.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 21 03:26 pilot3.tar.gz
2026-01-21 15:02:05 (19596): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 21 03:26 runpilot2-wrapper.sh
2026-01-21 15:02:05 (19596): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 Jan 21 09:09 init_data.xml
2026-01-21 15:02:05 (19596): Guest Log: -rwxr-xr-x. 1 atlas atlas    597770 Jan 21 09:09 input.tar.gz
2026-01-21 15:02:05 (19596): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 21 09:09 start_atlas.sh
2026-01-21 15:02:05 (19596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 21 09:09 EVNT.48298280._000008.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 15:02:05 (19596): Guest Log: -rw-r--r--. 1 atlas atlas      2611 Jan 21 09:09 pandaJob.out
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas   1000361 Jan 21 09:10 agis_schedconf.cvmfs.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas       428 Jan 21 09:10 workernode_map.json
2026-01-21 15:02:05 (19596): Guest Log: drwx------. 5 atlas atlas      4096 Jan 21 09:10 pilot3
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas 167009525 Jan 21 12:46 HITS.48298283._000128.pool.root.1
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas        95 Jan 21 12:47 pilot_heartbeat.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas      1032 Jan 21 12:47 memory_monitor_summary.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 21 12:47 agis_ddmendpoints.agis.ALL.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas    372622 Jan 21 12:47 log.48298283._000128.job.log.tgz.1
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas      6367 Jan 21 12:47 heartbeat.json
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 21 12:47 pilotlog.txt
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas   1819808 Jan 21 12:47 log.48298283._000128.job.log.1
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas       357 Jan 21 12:47 output.list
2026-01-21 15:02:05 (19596): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 21 12:47 runtime_log
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas   2211840 Jan 21 12:47 result.tar.gz
2026-01-21 15:02:05 (19596): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Jan 21 12:47 runtime_log.err
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas       670 Jan 21 12:47 5g4MDm32d28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk4qKDmTyuy2m.diag
2026-01-21 15:02:05 (19596): Guest Log: Looking for outputfile HITS.48298283._000128.pool.root.1
2026-01-21 15:02:05 (19596): Guest Log: HITS file was successfully produced
2026-01-21 15:02:05 (19596): Guest Log: -rw-------. 1 atlas atlas 167009525 Jan 21 12:46 /home/atlas/RunAtlas/HITS.48298283._000128.pool.root.1
2026-01-21 15:02:06 (19596): Guest Log: Successfully finished the ATLAS job!
2026-01-21 15:02:06 (19596): Guest Log: Copying the results back to the shared directory!
2026-01-21 15:02:06 (19596): Guest Log:  *** Contents of shared directory: ***
2026-01-21 15:02:06 (19596): Guest Log: total 416656
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root 256804147 Jan 21 09:08 ATLAS.root_0
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root 167009525 Jan 21  2026 HITS.pool.root.1
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root      8897 Jan 21 09:08 init_data.xml
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root    597770 Jan 21 08:34 input.tar.gz
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root   2211840 Jan 21  2026 result.tar.gz
2026-01-21 15:02:06 (19596): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 08:34 start_atlas.sh
2026-01-21 15:02:06 (19596): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 15:02:06 (19596): VM Completion File Detected.
2026-01-21 15:02:06 (19596): Powering off VM.
2026-01-21 15:02:06 (19596): Successfully stopped VM.
2026-01-21 15:02:06 (19596): Deregistering VM. (boinc_4aabb590e151e959, slot#2)
2026-01-21 15:02:06 (19596): Removing network bandwidth throttle group from VM.
2026-01-21 15:02:06 (19596): Removing VM from VirtualBox.
2026-01-21 15:02:12 (19596): called boinc_finish(0)

</stderr_txt>
]]>

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