Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-21 00:21:35 (888): vboxwrapper version 26210
2026-01-21 00:21:35 (888): BOINC client version: 8.0.2
2026-01-21 00:21:36 (888): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2026-01-21 00:21:36 (888): Successfully copied 'init_data.xml' to the shared directory.
2026-01-21 00:21:36 (888): Create VM. (boinc_ebfb5a0d108ede90, slot#1)
2026-01-21 00:21:37 (888): Setting Memory Size for VM. (4600MB)
2026-01-21 00:21:37 (888): Setting CPU Count for VM. (6)
2026-01-21 00:21:38 (888): Setting Chipset Options for VM.
2026-01-21 00:21:38 (888): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-21 00:21:38 (888): Setting Boot Options for VM.
2026-01-21 00:21:39 (888): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-21 00:21:39 (888): Enabling VM Network Access.
2026-01-21 00:21:39 (888): Disabling USB Support for VM.
2026-01-21 00:21:39 (888): Disabling COM Port Support for VM.
2026-01-21 00:21:40 (888): Disabling LPT Port Support for VM.
2026-01-21 00:21:40 (888): Disabling Audio Support for VM.
2026-01-21 00:21:40 (888): Disabling Clipboard Support for VM.
2026-01-21 00:21:40 (888): Disabling Drag and Drop Support for VM.
2026-01-21 00:21:41 (888): Adding storage controller(s) to VM.
2026-01-21 00:21:41 (888): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-21 00:21:42 (888): Adding VirtualBox Guest Additions to VM.
2026-01-21 00:21:42 (888): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-21 00:21:42 (888): forwarding host port 11830 to guest port 80
2026-01-21 00:21:42 (888): Enabling remote desktop for VM.
2026-01-21 00:21:43 (888): Required extension pack not installed, remote desktop not enabled.
2026-01-21 00:21:43 (888): Enabling shared directory for VM.
2026-01-21 00:21:43 (888): Starting VM using VBoxManage interface. (boinc_ebfb5a0d108ede90, slot#1)
2026-01-21 00:21:52 (888): Successfully started VM. (PID = '1608')
2026-01-21 00:21:52 (888): Reporting VM Process ID to BOINC.
2026-01-21 00:21:52 (888): Guest Log: BIOS: VirtualBox 6.0.14
2026-01-21 00:21:52 (888): Guest Log: CPUID EDX: 0x178bfbff
2026-01-21 00:21:52 (888): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-21 00:21:52 (888): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-21 00:21:52 (888): Detected: Web Application Enabled (http://localhost:11830)
2026-01-21 00:21:52 (888): Preference change detected
2026-01-21 00:21:52 (888): Setting CPU throttle for VM. (100%)
2026-01-21 00:21:52 (888): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-21 00:21:54 (888): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-21 00:21:54 (888): Guest Log: BIOS: Booting from Hard Disk...
2026-01-21 00:21:58 (888): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-21 00:21:58 (888): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-21 00:21:58 (888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-21 00:22:08 (888): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-21 00:22:08 (888): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-21 00:22:23 (888): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000339 main     Log opened 2026-01-21T00:22:21.016762000Z
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000554 main     OS Product: Linux
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000629 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000698 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000771 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000773 main     Process ID: 1337
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.000775 main     Package type: LINUX_64BITS_GENERIC
2026-01-21 00:22:23 (888): Guest Log: 00:00:00.003152 main     5.2.32 r132073 started. Verbose level = 0
2026-01-21 00:22:23 (888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-21 00:22:23 (888): Guest Log: [INFO] Mounting shared directory
2026-01-21 00:22:23 (888): Guest Log: [INFO] Checking for init_data.xml
2026-01-21 00:22:32 (888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-21 00:22:32 (888): Guest Log: [INFO] Detected branch: prod
2026-01-21 00:22:32 (888): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-21 00:22:32 (888): Guest Log: Copying input files
2026-01-21 00:22:33 (888): Guest Log: 00:00:10.007040 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 735 955 000ns (GuestNow=1 768 983 752 758 643 000 ns GuestLast=1 768 954 941 022 688 000 ns fSetTimeLastLoop=true )
2026-01-21 00:22:36 (888): Guest Log: Copied input files into RunAtlas.
2026-01-21 00:22:36 (888): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-21 00:22:36 (888): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-21 00:22:36 (888): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-21 00:22:36 (888): Guest Log: Further information can be found at the LHC@home message board.
2026-01-21 00:22:48 (888): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-21 00:22:49 (888): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-21 00:22:49 (888): Guest Log: 2.6.3.0 1620 0 30176 155378 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-21 00:22:51 (888): Guest Log: copied the webapp to /var/www
2026-01-21 00:22:51 (888): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-21 00:22:51 (888): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-21 00:22:52 (888): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-21 00:22:52 (888): Guest Log:  *** Starting ATLAS job. (PandaID=6977015593 taskID=48298649) ***
2026-01-21 02:02:04 (888): Status Report: Elapsed Time: '6000.000000'
2026-01-21 02:02:04 (888): Status Report: CPU Time: '30929.578125'
2026-01-21 03:42:16 (888): Status Report: Elapsed Time: '12000.000000'
2026-01-21 03:42:16 (888): Status Report: CPU Time: '66646.218750'
2026-01-21 05:22:26 (888): Status Report: Elapsed Time: '18000.000000'
2026-01-21 05:22:26 (888): Status Report: CPU Time: '102399.609375'
2026-01-21 07:02:32 (888): Status Report: Elapsed Time: '24000.000000'
2026-01-21 07:02:32 (888): Status Report: CPU Time: '138134.968750'
2026-01-21 08:42:42 (888): Status Report: Elapsed Time: '30000.000000'
2026-01-21 08:42:42 (888): Status Report: CPU Time: '173889.031250'
2026-01-21 10:13:05 (888): Guest Log:  *** Job finished ***
2026-01-21 10:13:05 (888): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,950 | INFO     | PID=6042 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,952 | INFO     | found 0 job(s) in 20 queues
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:00,953 | INFO     | [monitor] control thread has ended
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,025 | INFO     | all workflow threads have been joined
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,025 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,026 | INFO     | traces error code: 0
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,210 [wrapper] ==== pilot stdout END ====
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,223 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,236 [wrapper] pilotpid: 6042
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,249 [wrapper] Pilot exit status: 0
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,337 [wrapper] pandaids: 6977015593
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,428 [wrapper] cleanup supervisor_pilot  2701 6043
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,450 [wrapper] Test setup, not cleaning
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,462 [wrapper] apfmon messages muted
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,475 [wrapper] ==== wrapper stdout END ====
2026-01-21 10:13:05 (888): Guest Log: 2026-01-21 18:13:04,487 [wrapper] ==== wrapper stderr END ====
2026-01-21 10:13:05 (888): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 10:13:05 (888): Guest Log:     "exeErrorCode": 0,
2026-01-21 10:13:05 (888): Guest Log:     "exeErrorDiag": "",
2026-01-21 10:13:05 (888): Guest Log:     "pilotErrorCode": 0,
2026-01-21 10:13:05 (888): Guest Log:     "pilotErrorDiag": "",
2026-01-21 10:13:05 (888): Guest Log:  *** Listing of results directory ***
2026-01-21 10:13:05 (888): Guest Log: total 179920
2026-01-21 10:13:05 (888): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 20 22:53 pilot3.tar.gz
2026-01-21 10:13:05 (888): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 20 22:54 runpilot2-wrapper.sh
2026-01-21 10:13:05 (888): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 20 22:54 queuedata.json
2026-01-21 10:13:05 (888): Guest Log: -rwxr-xr-x. 1 atlas atlas      9205 Jan 21 08:22 init_data.xml
2026-01-21 10:13:05 (888): Guest Log: -rwxr-xr-x. 1 atlas atlas    597761 Jan 21 08:22 input.tar.gz
2026-01-21 10:13:05 (888): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 21 08:22 start_atlas.sh
2026-01-21 10:13:05 (888): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 21 08:22 EVNT.48298645._000023.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 10:13:05 (888): Guest Log: -rw-r--r--. 1 atlas atlas      2608 Jan 21 08:22 pandaJob.out
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas   1000361 Jan 21 08:24 agis_schedconf.cvmfs.json
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas       427 Jan 21 08:24 workernode_map.json
2026-01-21 10:13:05 (888): Guest Log: drwx------. 5 atlas atlas      4096 Jan 21 08:24 pilot3
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas 169409087 Jan 21 18:11 HITS.48298649._000553.pool.root.1
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 21 18:12 memory_monitor_summary.json
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 21 18:12 agis_ddmendpoints.agis.ALL.json
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas    700748 Jan 21 18:12 log.48298649._000553.job.log.tgz.1
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas      6367 Jan 21 18:12 heartbeat.json
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas        95 Jan 21 18:13 pilot_heartbeat.json
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 21 18:13 pilotlog.txt
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas   4777615 Jan 21 18:13 log.48298649._000553.job.log.1
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas       357 Jan 21 18:13 output.list
2026-01-21 10:13:05 (888): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 21 18:13 runtime_log
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas   5498880 Jan 21 18:13 result.tar.gz
2026-01-21 10:13:05 (888): Guest Log: -rw-r--r--. 1 atlas atlas      8776 Jan 21 18:13 runtime_log.err
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas       668 Jan 21 18:13 a6ALDmxmZ28n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3ZqKDm0vGPNn.diag
2026-01-21 10:13:05 (888): Guest Log: Looking for outputfile HITS.48298649._000553.pool.root.1
2026-01-21 10:13:05 (888): Guest Log: HITS file was successfully produced
2026-01-21 10:13:05 (888): Guest Log: -rw-------. 1 atlas atlas 169409087 Jan 21 18:11 /home/atlas/RunAtlas/HITS.48298649._000553.pool.root.1
2026-01-21 10:13:07 (888): Guest Log: Successfully finished the ATLAS job!
2026-01-21 10:13:07 (888): Guest Log: Copying the results back to the shared directory!
2026-01-21 10:13:08 (888): Guest Log:  *** Contents of shared directory: ***
2026-01-21 10:13:08 (888): Guest Log: total 417800
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root 252286770 Jan 21 08:21 ATLAS.root_0
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root 169409087 Jan 21 18:13 HITS.pool.root.1
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root      9205 Jan 21 08:21 init_data.xml
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root    597761 Jan 21 08:21 input.tar.gz
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root   5498880 Jan 21 18:13 result.tar.gz
2026-01-21 10:13:08 (888): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 08:21 start_atlas.sh
2026-01-21 10:13:08 (888): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 10:13:08 (888): VM Completion File Detected.
2026-01-21 10:13:08 (888): Powering off VM.
2026-01-21 10:13:10 (888): Successfully stopped VM.
2026-01-21 10:13:10 (888): Deregistering VM. (boinc_ebfb5a0d108ede90, slot#1)
2026-01-21 10:13:10 (888): Removing network bandwidth throttle group from VM.
2026-01-21 10:13:10 (888): Removing VM from VirtualBox.
2026-01-21 10:13:16 (888): called boinc_finish(0)

</stderr_txt>
]]>

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