Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:46 (2435724): wrapper (7.7.26015): starting
10:57:46 (2435724): wrapper: running run_atlas (--nthreads 3)
[2026-01-21 10:57:46] Arguments: --nthreads 3
[2026-01-21 10:57:46] Threads: 3
[2026-01-21 10:57:46] Checking for CVMFS
[2026-01-21 10:57:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 10:57:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 10:57:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 10:57:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 10:57:47] 2.9.2.0 2268285 873 69996 155379 0 50 23156230 36864000 0 130560 0 438393 99.982 31222 13675 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-21 10:57:47] CVMFS is ok
[2026-01-21 10:57:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-21 10:57:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-21 10:57:47] Further information can be found at the LHC@home message board.
[2026-01-21 10:57:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 10:57:47] Checking for apptainer binary...
[2026-01-21 10:57:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 10:57:47] Running /usr/bin/apptainer --version
[2026-01-21 10:57:47] apptainer version 1.4.1-1.1
[2026-01-21 10:57:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 10:57:47] magicA246a
[2026-01-21 10:57:47] apptainer works
[2026-01-21 10:57:47] Set ATHENA_PROC_NUMBER=3
[2026-01-21 10:57:47] Set ATHENA_CORE_NUMBER=3
[2026-01-21 10:57:47] Starting ATLAS job with PandaID=6976797745
[2026-01-21 10:57:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 12:15:17]  *** The last 200 lines of the pilot log: ***
[2026-01-21 12:15:17] 2026-01-21 11:14:46,718 | INFO     | did not find any defunct processes belonging to 2444186
[2026-01-21 12:15:17] 2026-01-21 11:14:46,720 | INFO     | did not find any defunct processes belonging to 2444186
[2026-01-21 12:15:17] 2026-01-21 11:14:46,720 | INFO     | ready for new job
[2026-01-21 12:15:17] 2026-01-21 11:14:46,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | **************************************
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | **************************************
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | 
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | architecture information:
[2026-01-21 12:15:17] 2026-01-21 11:14:46,721 | INFO     | executing command: cat /etc/os-release
[2026-01-21 12:15:17] 2026-01-21 11:14:46,730 | INFO     | cat /etc/os-release:
[2026-01-21 12:15:17] NAME="CentOS Linux"
[2026-01-21 12:15:17] VERSION="7 (Core)"
[2026-01-21 12:15:17] ID="centos"
[2026-01-21 12:15:17] ID_LIKE="rhel fedora"
[2026-01-21 12:15:17] VERSION_ID="7"
[2026-01-21 12:15:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 12:15:17] ANSI_COLOR="0;31"
[2026-01-21 12:15:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 12:15:17] HOME_URL="https://www.centos.org/"
[2026-01-21 12:15:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 12:15:17] 
[2026-01-21 12:15:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 12:15:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 12:15:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 12:15:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 12:15:17] 
[2026-01-21 12:15:17] 2026-01-21 11:14:46,730 | INFO     | **************************************
[2026-01-21 12:15:17] 2026-01-21 11:14:47,233 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-21 12:15:17] 2026-01-21 11:14:47,245 | INFO     | sufficient remaining disk space (280040046592 B)
[2026-01-21 12:15:17] 2026-01-21 11:14:47,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 12:15:17] 2026-01-21 11:14:47,245 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 12:15:17] 2026-01-21 11:14:47,245 | INFO     | update_server=False
[2026-01-21 12:15:17] 2026-01-21 11:14:47,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 12:15:17] 2026-01-21 11:14:47,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 12:15:17] 2026-01-21 11:14:47,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 12:15:17] 2026-01-21 11:14:47,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 12:15:17] 2026-01-21 11:14:47,927 | INFO     | aborting loop
[2026-01-21 12:15:17] 2026-01-21 11:14:47,974 | INFO     | all job control threads have been joined
[2026-01-21 12:15:17] 2026-01-21 11:14:48,046 | INFO     | all payload control threads have been joined
[2026-01-21 12:15:17] 2026-01-21 11:14:48,082 | INFO     | all data control threads have been joined
[2026-01-21 12:15:17] 2026-01-21 11:14:48,251 | INFO     | [job] retrieve thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:48,251 | INFO     | [job] queue monitor thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:48,530 | INFO     | [payload] validate_post thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:48,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 12:15:17] 2026-01-21 11:14:48,932 | INFO     | [job] job monitor thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:48,980 | INFO     | [job] control thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,051 | INFO     | [payload] control thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,087 | INFO     | [data] control thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,401 | INFO     | [job] validate thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,491 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,493 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,585 | INFO     | [payload] failed_post thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,593 | INFO     | [data] copytool_in thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:49,610 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:50,730 | INFO     | [data] copytool_out thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:51,251 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:14:58,093 | INFO     | job.realtimelogging is not enabled
[2026-01-21 12:15:17] 2026-01-21 11:14:59,098 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 12:15:17] 2026-01-21 11:15:02,096 | INFO     | [monitor] cgroup control has ended
[2026-01-21 12:15:17] 2026-01-21 11:15:02,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591718205248)>', '<ExcThread(monitor, started 140591216174848)>']
[2026-01-21 12:15:17] 2026-01-21 11:15:07,602 | INFO     | all workflow threads have been joined
[2026-01-21 12:15:17] 2026-01-21 11:15:07,602 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 12:15:17] 2026-01-21 11:15:07,603 | INFO     | traces error code: 0
[2026-01-21 12:15:17] 2026-01-21 11:15:07,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | INFO     | PID=2439767 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | CRITICAL | thread 'MainThread' is not alive
[2026-01-21 12:15:17] 2026-01-21 11:15:17,408 | INFO     | [monitor] control thread has ended
[2026-01-21 12:15:17] 2026-01-21 11:15:17,459 [wrapper] ==== pilot stdout END ====
[2026-01-21 12:15:17] 2026-01-21 11:15:17,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 12:15:17] 2026-01-21 11:15:17,464 [wrapper] pilotpid: 2439767
[2026-01-21 12:15:17] 2026-01-21 11:15:17,466 [wrapper] Pilot exit status: 0
[2026-01-21 12:15:17] 2026-01-21 11:15:17,473 [wrapper] pandaids: 6976797745
[2026-01-21 12:15:17] 2026-01-21 11:15:17,493 [wrapper] cleanup supervisor_pilot 2451174 2439768
[2026-01-21 12:15:17] 2026-01-21 11:15:17,496 [wrapper] Test setup, not cleaning
[2026-01-21 12:15:17] 2026-01-21 11:15:17,498 [wrapper] apfmon messages muted
[2026-01-21 12:15:17] 2026-01-21 11:15:17,500 [wrapper] ==== wrapper stdout END ====
[2026-01-21 12:15:17] 2026-01-21 11:15:17,503 [wrapper] ==== wrapper stderr END ====
[2026-01-21 12:15:17]  *** Error codes and diagnostics ***
[2026-01-21 12:15:17]     "exeErrorCode": 0,
[2026-01-21 12:15:17]     "exeErrorDiag": "",
[2026-01-21 12:15:17]     "pilotErrorCode": 0,
[2026-01-21 12:15:17]     "pilotErrorDiag": "",
[2026-01-21 12:15:17]  *** Listing of results directory ***
[2026-01-21 12:15:17] total 427280
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc    584422 Jan 20 19:43 pilot3.tar.gz
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      5111 Jan 20 20:01 queuedata.json
[2026-01-21 12:15:17] -rwx------ 1 boinc boinc     36322 Jan 20 20:01 runpilot2-wrapper.sh
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc       100 Jan 21 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 12:15:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 21 10:57 run_atlas
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc       105 Jan 21 10:57 job.xml
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc 261755708 Jan 21 10:57 EVNT.48298165._000018.pool.root.1
[2026-01-21 12:15:17] drwxrwx--x 2 boinc boinc      4096 Jan 21 10:57 shared
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc    597773 Jan 21 10:57 input.tar.gz
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc     15845 Jan 21 10:57 start_atlas.sh
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc         0 Jan 21 10:57 boinc_setup_complete
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      6447 Jan 21 10:57 init_data.xml
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc         0 Jan 21 10:57 boinc_lockfile
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      2604 Jan 21 10:57 pandaJob.out
[2026-01-21 12:15:17] -rw------- 1 boinc boinc   1000361 Jan 21 10:57 agis_schedconf.cvmfs.json
[2026-01-21 12:15:17] -rw------- 1 boinc boinc   1516246 Jan 21 10:57 agis_ddmendpoints.agis.ALL.json
[2026-01-21 12:15:17] -rw------- 1 boinc boinc       428 Jan 21 10:57 workernode_map.json
[2026-01-21 12:15:17] drwx------ 5 boinc boinc      4096 Jan 21 10:57 pilot3
[2026-01-21 12:15:17] -rw------- 1 boinc boinc        95 Jan 21 12:14 pilot_heartbeat.json
[2026-01-21 12:15:17] -rw------- 1 boinc boinc 169984847 Jan 21 12:14 HITS.48298168._000438.pool.root.1
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc       529 Jan 21 12:14 boinc_task_state.xml
[2026-01-21 12:15:17] -rw------- 1 boinc boinc      1017 Jan 21 12:14 memory_monitor_summary.json
[2026-01-21 12:15:17] -rw------- 1 boinc boinc    250109 Jan 21 12:14 log.48298168._000438.job.log.tgz.1
[2026-01-21 12:15:17] -rw------- 1 boinc boinc      6306 Jan 21 12:14 heartbeat.json
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      8192 Jan 21 12:14 boinc_mmap_file
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc        27 Jan 21 12:14 wrapper_checkpoint.txt
[2026-01-21 12:15:17] -rw------- 1 boinc boinc       817 Jan 21 12:15 pilotlog.txt
[2026-01-21 12:15:17] -rw------- 1 boinc boinc    680294 Jan 21 12:15 log.48298168._000438.job.log.1
[2026-01-21 12:15:17] -rw------- 1 boinc boinc       357 Jan 21 12:15 output.list
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc       620 Jan 21 12:15 runtime_log
[2026-01-21 12:15:17] -rw------- 1 boinc boinc    952320 Jan 21 12:15 result.tar.gz
[2026-01-21 12:15:17] -rw------- 1 boinc boinc       661 Jan 21 12:15 sRsNDm49V28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNJwKDmHMSTEm.diag
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      8916 Jan 21 12:15 runtime_log.err
[2026-01-21 12:15:17] -rw-r--r-- 1 boinc boinc      9940 Jan 21 12:15 stderr.txt
[2026-01-21 12:15:17] HITS file was successfully produced:
[2026-01-21 12:15:17] -rw------- 1 boinc boinc 169984847 Jan 21 12:14 shared/HITS.pool.root.1
[2026-01-21 12:15:17]  *** Contents of shared directory: ***
[2026-01-21 12:15:17] total 423168
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc 261755708 Jan 21 10:57 ATLAS.root_0
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc    597773 Jan 21 10:57 input.tar.gz
[2026-01-21 12:15:17] -rw-r--r-- 2 boinc boinc     15845 Jan 21 10:57 start_atlas.sh
[2026-01-21 12:15:17] -rw------- 1 boinc boinc 169984847 Jan 21 12:14 HITS.pool.root.1
[2026-01-21 12:15:17] -rw------- 1 boinc boinc    952320 Jan 21 12:15 result.tar.gz
12:15:18 (2435724): run_atlas exited; CPU time 13206.622096
12:15:18 (2435724): called boinc_finish(0)

</stderr_txt>
]]>

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