Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-21 01:06:10 (2940): vboxwrapper version 26210
2026-01-21 01:06:10 (2940): BOINC client version: 8.2.8
2026-01-21 01:06:11 (2940): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2026-01-21 01:06:11 (2940): Successfully copied 'init_data.xml' to the shared directory.
2026-01-21 01:06:11 (2940): Create VM. (boinc_b1772e64cc996089, slot#4)
2026-01-21 01:06:12 (2940): Setting Memory Size for VM. (4400MB)
2026-01-21 01:06:12 (2940): Setting CPU Count for VM. (4)
2026-01-21 01:06:12 (2940): Setting Chipset Options for VM.
2026-01-21 01:06:13 (2940): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-21 01:06:13 (2940): Setting Boot Options for VM.
2026-01-21 01:06:14 (2940): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-21 01:06:14 (2940): Enabling VM Network Access.
2026-01-21 01:06:14 (2940): Disabling USB Support for VM.
2026-01-21 01:06:14 (2940): Disabling COM Port Support for VM.
2026-01-21 01:06:15 (2940): Disabling LPT Port Support for VM.
2026-01-21 01:06:15 (2940): Disabling Audio Support for VM.
2026-01-21 01:06:15 (2940): Disabling Clipboard Support for VM.
2026-01-21 01:06:15 (2940): Disabling Drag and Drop Support for VM.
2026-01-21 01:06:16 (2940): Adding storage controller(s) to VM.
2026-01-21 01:06:16 (2940): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-21 01:06:18 (2940): Adding VirtualBox Guest Additions to VM.
2026-01-21 01:06:18 (2940): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-21 01:06:19 (2940): forwarding host port 63521 to guest port 80
2026-01-21 01:06:19 (2940): Enabling remote desktop for VM.
2026-01-21 01:06:19 (2940): Required extension pack not installed, remote desktop not enabled.
2026-01-21 01:06:19 (2940): Enabling shared directory for VM.
2026-01-21 01:06:20 (2940): Starting VM using VBoxManage interface. (boinc_b1772e64cc996089, slot#4)
2026-01-21 01:06:26 (2940): Successfully started VM. (PID = '6716')
2026-01-21 01:06:26 (2940): Reporting VM Process ID to BOINC.
2026-01-21 01:06:26 (2940): Guest Log: BIOS: VirtualBox 7.1.0
2026-01-21 01:06:26 (2940): Guest Log: CPUID EDX: 0x178bfbff
2026-01-21 01:06:26 (2940): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-21 01:06:26 (2940): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-21 01:06:26 (2940): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-21 01:06:26 (2940): Detected: Web Application Enabled (http://localhost:63521)
2026-01-21 01:06:26 (2940): Preference change detected
2026-01-21 01:06:26 (2940): Setting CPU throttle for VM. (90%)
2026-01-21 01:06:27 (2940): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-21 01:06:28 (2940): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-21 01:06:28 (2940): Guest Log: BIOS: Booting from Hard Disk...
2026-01-21 01:06:31 (2940): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-21 01:06:31 (2940): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-21 01:06:31 (2940): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-21 01:06:42 (2940): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-21 01:06:42 (2940): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-21 01:06:50 (2940): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000199 main     Log opened 2026-01-21T01:06:48.729157000Z
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000440 main     OS Product: Linux
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000492 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000531 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000571 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000573 main     Process ID: 1281
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.000573 main     Package type: LINUX_64BITS_GENERIC
2026-01-21 01:06:50 (2940): Guest Log: 00:00:00.001690 main     5.2.32 r132073 started. Verbose level = 0
2026-01-21 01:06:50 (2940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-21 01:06:50 (2940): Guest Log: [INFO] Mounting shared directory
2026-01-21 01:06:50 (2940): Guest Log: [INFO] Checking for init_data.xml
2026-01-21 01:07:00 (2940): Guest Log: 00:00:10.004903 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 002 813 818 000ns (GuestNow=1 768 975 611 546 609 000 ns GuestLast=1 768 957 608 732 791 000 ns fSetTimeLastLoop=true )
2026-01-21 01:07:18 (2940): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-21 01:07:18 (2940): Guest Log: [INFO] Detected branch: prod
2026-01-21 01:07:19 (2940): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-21 01:07:19 (2940): Guest Log: Copying input files
2026-01-21 01:07:22 (2940): Guest Log: Copied input files into RunAtlas.
2026-01-21 01:07:22 (2940): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-21 01:07:22 (2940): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-21 01:07:22 (2940): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-21 01:07:22 (2940): Guest Log: Further information can be found at the LHC@home message board.
2026-01-21 01:07:38 (2940): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-21 01:07:39 (2940): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-21 01:07:39 (2940): Guest Log: 2.6.3.0 1597 0 30076 155373 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-21 01:07:40 (2940): Guest Log: copied the webapp to /var/www
2026-01-21 01:07:40 (2940): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-21 01:07:40 (2940): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-21 01:07:42 (2940): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-21 01:07:42 (2940): Guest Log:  *** Starting ATLAS job. (PandaID=6976883185 taskID=48299637) ***
2026-01-21 01:44:28 (2940): Guest Log:  *** Job finished ***
2026-01-21 01:44:28 (2940): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:43:53,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:43:53,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:10,084 | INFO     | [monitor] cgroup control has ended
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:12,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943300040512)>', '<ExcThread(monitor, started 139942650967808)>']
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:13,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:13,116 | INFO     | [monitor] control thread has ended
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,186 | INFO     | all workflow threads have been joined
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,186 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,186 | INFO     | traces error code: 0
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,361 [wrapper] ==== pilot stdout END ====
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,369 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,377 [wrapper] pilotpid: 6118
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:17,386 [wrapper] Pilot exit status: 0
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,738 [wrapper] pandaids: 6976883185
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,789 [wrapper] cleanup supervisor_pilot 25228 6119
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,798 [wrapper] Test setup, not cleaning
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,806 [wrapper] apfmon messages muted
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,814 [wrapper] ==== wrapper stdout END ====
2026-01-21 01:44:28 (2940): Guest Log: 2026-01-21 06:44:18,822 [wrapper] ==== wrapper stderr END ====
2026-01-21 01:44:28 (2940): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 01:44:28 (2940): Guest Log:     "exeErrorCode": 65,
2026-01-21 01:44:28 (2940): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-01-21 01:44:28 (2940): Guest Log:     "pilotErrorCode": 1305,
2026-01-21 01:44:28 (2940): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-01-21 01:44:28 (2940): Guest Log:  *** Listing of results directory ***
2026-01-21 01:44:28 (2940): Guest Log: total 4808
2026-01-21 01:44:28 (2940): Guest Log: -rw-r--r--. 1 atlas atlas  584422 Jan 20 19:56 pilot3.tar.gz
2026-01-21 01:44:28 (2940): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Jan 20 20:25 queuedata.json
2026-01-21 01:44:28 (2940): Guest Log: -rwx------. 1 atlas atlas   36322 Jan 20 20:25 runpilot2-wrapper.sh
2026-01-21 01:44:28 (2940): Guest Log: -rwxr-xr-x. 1 atlas atlas    6500 Jan 21 06:07 init_data.xml
2026-01-21 01:44:28 (2940): Guest Log: -rwxr-xr-x. 1 atlas atlas  597768 Jan 21 06:07 input.tar.gz
2026-01-21 01:44:28 (2940): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Jan 21 06:07 start_atlas.sh
2026-01-21 01:44:28 (2940): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jan 21 06:07 EVNT.48299635._000034.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 01:44:28 (2940): Guest Log: -rw-r--r--. 1 atlas atlas    2619 Jan 21 06:07 pandaJob.out
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas 1516246 Jan 21 06:18 agis_ddmendpoints.agis.ALL.json
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas     403 Jan 21 06:18 workernode_map.json
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas 1000361 Jan 21 06:19 agis_schedconf.cvmfs.json
2026-01-21 01:44:28 (2940): Guest Log: drwx------. 5 atlas atlas    4096 Jan 21 06:19 pilot3
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas   72540 Jan 21 06:41 log.48299637._000832.job.log.tgz.1
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas    6665 Jan 21 06:43 heartbeat.json
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas      95 Jan 21 06:43 pilot_heartbeat.json
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas    4801 Jan 21 06:44 pilotlog.txt
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas  459645 Jan 21 06:44 log.48299637._000832.job.log.1
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas     188 Jan 21 06:44 output.list
2026-01-21 01:44:28 (2940): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jan 21 06:44 runtime_log
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas  552960 Jan 21 06:44 result.tar.gz
2026-01-21 01:44:28 (2940): Guest Log: -rw-r--r--. 1 atlas atlas    8592 Jan 21 06:44 runtime_log.err
2026-01-21 01:44:28 (2940): Guest Log: -rw-------. 1 atlas atlas     647 Jan 21 06:44 9GfKDm5SX28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDhwKDmM8Nnym.diag
2026-01-21 01:44:28 (2940): Guest Log: Looking for outputfile HITS.48299637._000832.pool.root.1
2026-01-21 01:44:28 (2940): Guest Log: No HITS file was produced
2026-01-21 01:44:28 (2940): Guest Log: Successfully finished the ATLAS job!
2026-01-21 01:44:28 (2940): Guest Log: Copying the results back to the shared directory!
2026-01-21 01:44:28 (2940): Guest Log:  *** Contents of shared directory: ***
2026-01-21 01:44:28 (2940): Guest Log: total 252248
2026-01-21 01:44:28 (2940): Guest Log: -rwxrwxrwx. 1 root root 257123002 Jan 21 06:06 ATLAS.root_0
2026-01-21 01:44:28 (2940): Guest Log: -rwxrwxrwx. 1 root root      6500 Jan 21 06:06 init_data.xml
2026-01-21 01:44:28 (2940): Guest Log: -rwxrwxrwx. 1 root root    597768 Jan 21 04:06 input.tar.gz
2026-01-21 01:44:28 (2940): Guest Log: -rwxrwxrwx. 1 root root    552960 Jan 21  2026 result.tar.gz
2026-01-21 01:44:28 (2940): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 21 04:06 start_atlas.sh
2026-01-21 01:44:28 (2940): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 01:44:28 (2940): VM Completion File Detected.
2026-01-21 01:44:28 (2940): Powering off VM.
2026-01-21 01:44:30 (2940): Successfully stopped VM.
2026-01-21 01:44:30 (2940): Deregistering VM. (boinc_b1772e64cc996089, slot#4)
2026-01-21 01:44:30 (2940): Removing network bandwidth throttle group from VM.
2026-01-21 01:44:30 (2940): Removing VM from VirtualBox.
2026-01-21 01:44:35 (2940): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN