Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:39:22 (4265): wrapper (7.7.26015): starting
02:39:22 (4265): wrapper: running run_atlas (--nthreads 4)
[2026-01-21 02:39:22] Arguments: --nthreads 4
[2026-01-21 02:39:22] Threads: 4
[2026-01-21 02:39:22] Checking for CVMFS
[2026-01-21 02:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 02:39:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 02:39:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 02:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 02:39:28] 2.11.5.0 4473 0 25456 155367 3 1 2674703 4096001 0 130560 0 0 0.000 1335 1402 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-01-21 02:39:28] CVMFS is ok
[2026-01-21 02:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 02:39:28] Checking for apptainer binary...
[2026-01-21 02:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 02:39:28] Running /usr/bin/apptainer --version
[2026-01-21 02:39:29] apptainer version 1.0.3
[2026-01-21 02:39:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 02:39:30] TeeC28
[2026-01-21 02:39:30] apptainer works
[2026-01-21 02:39:30] Set ATHENA_PROC_NUMBER=4
[2026-01-21 02:39:30] Set ATHENA_CORE_NUMBER=4
[2026-01-21 02:39:30] Starting ATLAS job with PandaID=6976857445
[2026-01-21 02:39:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 06:01:30]  *** The last 200 lines of the pilot log: ***
[2026-01-21 06:01:30] 2026-01-21 06:00:34,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 06:01:30] 2026-01-21 06:00:35,724 | INFO     | time since job start (12032s) is within the limit (349056.0s)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,107 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 06:01:30] 2026-01-21 06:00:36,214 | INFO     | job 6976857445 has state=finished
[2026-01-21 06:01:30] 2026-01-21 06:00:36,214 | INFO     | preparing for final server update for job 6976857445 in state='finished'
[2026-01-21 06:01:30] 2026-01-21 06:00:36,215 | INFO     | reading metadata from: /home/m/users/jmp/BOINC/slots/3/PanDA_Pilot-6976857445/jobReport.json
[2026-01-21 06:01:30] 2026-01-21 06:00:36,217 | INFO     | added worker_node to metadata from /home/m/users/jmp/BOINC/slots/3/workernode_map.json
[2026-01-21 06:01:30] 2026-01-21 06:00:36,217 | INFO     | this job has now completed (state=finished)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,217 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,217 | INFO     | log transfer has been attempted: DONE
[2026-01-21 06:01:30] 2026-01-21 06:00:36,217 | INFO     | job 6976857445 has finished - writing final server update
[2026-01-21 06:01:30] 2026-01-21 06:00:36,218 | INFO     | total number of processed events: 400 (read)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,237 | INFO     | using path: /home/m/users/jmp/BOINC/slots/3/PanDA_Pilot-6976857445/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,238 | INFO     | extracted standard info from prmon json
[2026-01-21 06:01:30] 2026-01-21 06:00:36,238 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 06:01:30] 2026-01-21 06:00:36,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 06:01:30] 2026-01-21 06:00:36,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 06:01:30] 2026-01-21 06:00:36,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 06:01:30] 2026-01-21 06:00:36,243 | INFO     | fitting pss+swap vs Time
[2026-01-21 06:01:30] 2026-01-21 06:00:36,244 | INFO     | sum of square deviations: 2370641658.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,246 | INFO     | sum of deviations: -8855182669.000002
[2026-01-21 06:01:30] 2026-01-21 06:00:36,246 | INFO     | mean x: 1768969204.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,246 | INFO     | mean y: 2371917.923857868
[2026-01-21 06:01:30] 2026-01-21 06:00:36,246 | INFO     | intersect: 6610095773.781084
[2026-01-21 06:01:30] 2026-01-21 06:00:36,247 | INFO     | chi2: 1.7534235303560388
[2026-01-21 06:01:30] 2026-01-21 06:00:36,247 | INFO     | sum of square deviations: 2194675568.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | sum of deviations: -8557356360.500002
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | mean x: 1768969051.5
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | mean y: 2372176.0885416665
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | intersect: 6899837471.232877
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | chi2: 1.752397839194173
[2026-01-21 06:01:30] 2026-01-21 06:00:36,250 | INFO     | current chi2=1.752397839194173 (change=0.058496486679263604 %)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,251 | INFO     | right removable region: 191
[2026-01-21 06:01:30] 2026-01-21 06:00:36,251 | INFO     | sum of square deviations: 2194675568.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,253 | INFO     | sum of deviations: -33977029158.000004
[2026-01-21 06:01:30] 2026-01-21 06:00:36,253 | INFO     | mean x: 1768969356.5
[2026-01-21 06:01:30] 2026-01-21 06:00:36,253 | INFO     | mean y: 2393370.0520833335
[2026-01-21 06:01:30] 2026-01-21 06:00:36,253 | INFO     | intersect: 27388820904.843414
[2026-01-21 06:01:30] 2026-01-21 06:00:36,254 | INFO     | chi2: 0.33354131531158915
[2026-01-21 06:01:30] 2026-01-21 06:00:36,254 | INFO     | current chi2=0.33354131531158915 (change=80.9777096327741 %)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,254 | INFO     | sum of square deviations: 2027639878.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,256 | INFO     | sum of deviations: -24820766959.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,256 | INFO     | mean x: 1768969509.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,256 | INFO     | mean y: 2384989.470588235
[2026-01-21 06:01:30] 2026-01-21 06:00:36,257 | INFO     | intersect: 21656713461.138996
[2026-01-21 06:01:30] 2026-01-21 06:00:36,257 | INFO     | chi2: 0.2881142824789834
[2026-01-21 06:01:30] 2026-01-21 06:00:36,257 | INFO     | current chi2=0.2881142824789834 (change=13.619611948273485 %)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,257 | INFO     | left removable region: 20
[2026-01-21 06:01:30] 2026-01-21 06:00:36,257 | INFO     | sum of square deviations: 1550429070.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,259 | INFO     | sum of deviations: -3301445660.0000014
[2026-01-21 06:01:30] 2026-01-21 06:00:36,259 | INFO     | mean x: 1768969631.0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,259 | INFO     | mean y: 2363774.035087719
[2026-01-21 06:01:30] 2026-01-21 06:00:36,259 | INFO     | intersect: 3769164348.108917
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | chi2: 0.09127584729571431
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | current memory leak: -2.13 B/s (using 171 data points, chi2=0.09)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | could have reported an average CPU frequency of 2700 MHz (10 samples)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | ..............................
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | . Timing measurements:
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | . get job = 0 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | . initial setup = 15 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,260 | INFO     | . payload setup = 7 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,261 | INFO     | . stage-in = 0 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,261 | INFO     | . payload execution = 11997 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,261 | INFO     | . stage-out = 8 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,261 | INFO     | . log creation = 0 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,261 | INFO     | ..............................
[2026-01-21 06:01:30] 2026-01-21 06:00:36,357 | INFO     | 
[2026-01-21 06:01:30] 2026-01-21 06:00:36,357 | INFO     | job summary report
[2026-01-21 06:01:30] 2026-01-21 06:00:36,357 | INFO     | --------------------------------------------------
[2026-01-21 06:01:30] 2026-01-21 06:00:36,357 | INFO     | PanDA job id: 6976857445
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | task id: 48299661
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | errors: (none)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | pilot state: finished 
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | transexitcode: 0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | exeerrorcode: 0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | exeerrordiag: 
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | exitcode: 0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | exitmsg: OK
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | cpuconsumptiontime: 46066 s
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | nevents: 400
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | neventsw: 0
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | pid: 12893
[2026-01-21 06:01:30] 2026-01-21 06:00:36,358 | INFO     | pgrp: 12893
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | corecount: 4
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | event service: False
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | sizes: {0: 2283955, 1: 2284416, 11: 2284416, 12009: 2314190, 12019: 2323206, 12021: 2323584}
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | --------------------------------------------------
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | 
[2026-01-21 06:01:30] 2026-01-21 06:00:36,359 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/3
[2026-01-21 06:01:30] 2026-01-21 06:00:36,368 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,368 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | job 6976857445 has completed (purged errors)
[2026-01-21 06:01:30] 2026-01-21 06:00:36,370 | INFO     | overall cleanup function is called
[2026-01-21 06:01:30] 2026-01-21 06:00:37,377 | INFO     | --- collectZombieJob: --- 10, [12893]
[2026-01-21 06:01:30] 2026-01-21 06:00:37,377 | INFO     | zombie collector waiting for pid 12893
[2026-01-21 06:01:30] 2026-01-21 06:00:37,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 06:01:30] 2026-01-21 06:00:37,378 | INFO     | collected zombie processes
[2026-01-21 06:01:30] 2026-01-21 06:00:37,378 | INFO     | will attempt to kill all subprocesses of pid=12893
[2026-01-21 06:01:30] 2026-01-21 06:00:37,450 | INFO     | process IDs to be killed: [12893] (in reverse order)
[2026-01-21 06:01:30] 2026-01-21 06:00:37,475 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 06:01:30] 2026-01-21 06:00:37,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 06:01:30] 2026-01-21 06:00:37,477 | INFO     | did not find any defunct processes belonging to 12893
[2026-01-21 06:01:30] 2026-01-21 06:00:37,478 | INFO     | did not find any defunct processes belonging to 12893
[2026-01-21 06:01:30] 2026-01-21 06:00:37,479 | INFO     | ready for new job
[2026-01-21 06:01:30] 2026-01-21 06:00:37,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 06:01:30] 2026-01-21 06:00:37,480 | INFO     | **************************************
[2026-01-21 06:01:30] 2026-01-21 06:00:37,480 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 06:01:30] 2026-01-21 06:00:37,480 | INFO     | **************************************
[2026-01-21 06:01:30] 2026-01-21 06:00:37,480 | INFO     | 
[2026-01-21 06:01:30] 2026-01-21 06:00:37,500 | INFO     | architecture information:
[2026-01-21 06:01:30] 2026-01-21 06:00:37,501 | INFO     | executing command: cat /etc/os-release
[2026-01-21 06:01:30] 2026-01-21 06:00:37,507 | INFO     | cat /etc/os-release:
[2026-01-21 06:01:30] NAME="CentOS Linux"
[2026-01-21 06:01:30] VERSION="7 (Core)"
[2026-01-21 06:01:30] ID="centos"
[2026-01-21 06:01:30] ID_LIKE="rhel fedora"
[2026-01-21 06:01:30] VERSION_ID="7"
[2026-01-21 06:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 06:01:30] ANSI_COLOR="0;31"
[2026-01-21 06:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 06:01:30] HOME_URL="https://www.centos.org/"
[2026-01-21 06:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 06:01:30] 
[2026-01-21 06:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 06:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 06:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 06:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 06:01:30] 
[2026-01-21 06:01:30] 2026-01-21 06:00:37,507 | INFO     | **************************************
[2026-01-21 06:01:30] 2026-01-21 06:00:38,011 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/3
[2026-01-21 06:01:30] 2026-01-21 06:00:38,021 | INFO     | sufficient remaining disk space (413755506688 B)
[2026-01-21 06:01:30] 2026-01-21 06:00:38,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 06:01:30] 2026-01-21 06:00:38,021 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 06:01:30] 2026-01-21 06:00:38,022 | INFO     | update_server=False
[2026-01-21 06:01:30] 2026-01-21 06:00:38,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 06:01:30] 2026-01-21 06:00:38,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 06:01:30] 2026-01-21 06:00:38,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 06:01:30] 2026-01-21 06:00:38,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 06:01:30] 2026-01-21 06:00:38,023 | INFO     | aborting loop
[2026-01-21 06:01:30] 2026-01-21 06:00:38,844 | INFO     | all data control threads have been joined
[2026-01-21 06:01:30] 2026-01-21 06:00:38,969 | INFO     | all payload control threads have been joined
[2026-01-21 06:01:30] 2026-01-21 06:00:39,025 | INFO     | [job] retrieve thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,029 | INFO     | [job] queue monitor thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,030 | INFO     | [job] job monitor thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,215 | INFO     | all job control threads have been joined
[2026-01-21 06:01:30] 2026-01-21 06:00:39,228 | INFO     | [data] copytool_in thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,229 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,321 | INFO     | [payload] failed_post thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 06:01:30] 2026-01-21 06:00:39,804 | INFO     | [payload] validate_post thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,848 | INFO     | [data] control thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,858 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,877 | INFO     | [job] validate thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:39,975 | INFO     | [payload] control thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:40,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:40,221 | INFO     | [job] control thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:40,385 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:41,403 | INFO     | [data] copytool_out thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:00:42,029 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 06:01:30] 2026-01-21 06:01:08,859 | INFO     | PID=8518 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-21 06:01:30] 2026-01-21 06:01:08,860 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 06:01:30] 2026-01-21 06:01:08,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 06:01:30] 2026-01-21 06:01:08,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 06:01:30] 2026-01-21 06:01:22,984 | INFO     | [monitor] cgroup control has ended
[2026-01-21 06:01:30] 2026-01-21 06:01:24,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519836772160)>', '<ExcThread(monitor, started 140519317436160)>']
[2026-01-21 06:01:30] 2026-01-21 06:01:24,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 06:01:30] 2026-01-21 06:01:24,941 | INFO     | [monitor] control thread has ended
[2026-01-21 06:01:30] 2026-01-21 06:01:29,843 | INFO     | all workflow threads have been joined
[2026-01-21 06:01:30] 2026-01-21 06:01:29,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 06:01:30] 2026-01-21 06:01:29,845 | INFO     | traces error code: 0
[2026-01-21 06:01:30] 2026-01-21 06:01:29,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 06:01:30] 2026-01-21 06:01:29,951 [wrapper] ==== pilot stdout END ====
[2026-01-21 06:01:30] 2026-01-21 06:01:29,953 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 06:01:30] 2026-01-21 06:01:29,955 [wrapper] pilotpid: 8518
[2026-01-21 06:01:30] 2026-01-21 06:01:29,956 [wrapper] Pilot exit status: 0
[2026-01-21 06:01:30] 2026-01-21 06:01:29,972 [wrapper] pandaids: 6976857445
[2026-01-21 06:01:30] 2026-01-21 06:01:29,988 [wrapper] cleanup supervisor_pilot 18140 8519
[2026-01-21 06:01:30] 2026-01-21 06:01:29,990 [wrapper] Test setup, not cleaning
[2026-01-21 06:01:30] 2026-01-21 06:01:29,992 [wrapper] apfmon messages muted
[2026-01-21 06:01:30] 2026-01-21 06:01:29,994 [wrapper] ==== wrapper stdout END ====
[2026-01-21 06:01:30] 2026-01-21 06:01:29,995 [wrapper] ==== wrapper stderr END ====
[2026-01-21 06:01:30]  *** Error codes and diagnostics ***
[2026-01-21 06:01:30]     "exeErrorCode": 0,
[2026-01-21 06:01:30]     "exeErrorDiag": "",
[2026-01-21 06:01:30]     "pilotErrorCode": 0,
[2026-01-21 06:01:30]     "pilotErrorDiag": "",
[2026-01-21 06:01:30]  *** Listing of results directory ***
[2026-01-21 06:01:30] total 415100
[2026-01-21 06:01:30] -rw-r--r-- 1 m m    584422 Jan 20 19:56 pilot3.tar.gz
[2026-01-21 06:01:30] -rw-r--r-- 1 m m      5111 Jan 20 20:00 queuedata.json
[2026-01-21 06:01:30] -rwx------ 1 m m     36322 Jan 20 20:00 runpilot2-wrapper.sh
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m       100 Jan 21 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 06:01:30] -rwxr-xr-x 1 m m      7986 Jan 21 02:39 run_atlas
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m       105 Jan 21 02:39 job.xml
[2026-01-21 06:01:30] -rw-r--r-- 2 m m     15845 Jan 21 02:39 start_atlas.sh
[2026-01-21 06:01:30] drwxrwx--x 2 m m      4096 Jan 21 02:39 shared
[2026-01-21 06:01:30] -rw-r--r-- 2 m m    597781 Jan 21 02:39 input.tar.gz
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m      6030 Jan 21 02:39 init_data.xml
[2026-01-21 06:01:30] -rw-r--r-- 2 m m 249126680 Jan 21 02:39 EVNT.48299659._000018.pool.root.1
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m         0 Jan 21 02:39 boinc_lockfile
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m      2628 Jan 21 02:39 pandaJob.out
[2026-01-21 06:01:30] -rw------- 1 m m   1002345 Jan 21 02:39 agis_schedconf.cvmfs.json
[2026-01-21 06:01:30] -rw------- 1 m m       412 Jan 21 02:40 workernode_map.json
[2026-01-21 06:01:30] drwx------ 5 m m      4096 Jan 21 02:40 pilot3
[2026-01-21 06:01:30] -rw------- 1 m m 167857234 Jan 21 05:59 HITS.48299661._000390.pool.root.1
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m       530 Jan 21 06:00 boinc_task_state.xml
[2026-01-21 06:01:30] -rw------- 1 m m      1029 Jan 21 06:00 memory_monitor_summary.json
[2026-01-21 06:01:30] -rw------- 1 m m   1516246 Jan 21 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-21 06:01:30] -rw------- 1 m m    368631 Jan 21 06:00 log.48299661._000390.job.log.tgz.1
[2026-01-21 06:01:30] -rw------- 1 m m      6315 Jan 21 06:00 heartbeat.json
[2026-01-21 06:01:30] -rw------- 1 m m        95 Jan 21 06:01 pilot_heartbeat.json
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m        28 Jan 21 06:01 wrapper_checkpoint.txt
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m      8192 Jan 21 06:01 boinc_mmap_file
[2026-01-21 06:01:30] -rw------- 1 m m      4751 Jan 21 06:01 pilotlog.txt
[2026-01-21 06:01:30] -rw------- 1 m m   1705798 Jan 21 06:01 log.48299661._000390.job.log.1
[2026-01-21 06:01:30] -rw------- 1 m m       357 Jan 21 06:01 output.list
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m       620 Jan 21 06:01 runtime_log
[2026-01-21 06:01:30] -rw------- 1 m m   2088960 Jan 21 06:01 result.tar.gz
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m      8889 Jan 21 06:01 runtime_log.err
[2026-01-21 06:01:30] -rw------- 1 m m       645 Jan 21 06:01 iRzLDmc4W28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJ5pKDmgv4rnm.diag
[2026-01-21 06:01:30] -rw-rw-r-- 1 m m     20991 Jan 21 06:01 stderr.txt
[2026-01-21 06:01:30] HITS file was successfully produced:
[2026-01-21 06:01:30] -rw------- 1 m m 167857234 Jan 21 05:59 shared/HITS.pool.root.1
[2026-01-21 06:01:30]  *** Contents of shared directory: ***
[2026-01-21 06:01:30] total 409860
[2026-01-21 06:01:30] -rw-r--r-- 2 m m     15845 Jan 21 02:39 start_atlas.sh
[2026-01-21 06:01:30] -rw-r--r-- 2 m m    597781 Jan 21 02:39 input.tar.gz
[2026-01-21 06:01:30] -rw-r--r-- 2 m m 249126680 Jan 21 02:39 ATLAS.root_0
[2026-01-21 06:01:30] -rw------- 1 m m 167857234 Jan 21 05:59 HITS.pool.root.1
[2026-01-21 06:01:30] -rw------- 1 m m   2088960 Jan 21 06:01 result.tar.gz
06:01:31 (4265): run_atlas exited; CPU time 46193.383883
06:01:31 (4265): called boinc_finish(0)

</stderr_txt>
]]>

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