Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:10:43 (1814249): wrapper (7.7.26015): starting
04:10:43 (1814249): wrapper: running run_atlas (--nthreads 4)
[2026-01-22 04:10:43] Arguments: --nthreads 4
[2026-01-22 04:10:43] Threads: 4
[2026-01-22 04:10:43] Checking for CVMFS
[2026-01-22 04:10:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 04:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 04:10:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 04:10:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 04:10:47] 2.13.3.0 897907 1338 55656 155392 0 188 5596852 6144001 2733 130560 0 2186697 99.995 40477 107 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-22 04:10:47] CVMFS is ok
[2026-01-22 04:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 04:10:47] Checking for apptainer binary...
[2026-01-22 04:10:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 04:10:47] Running /usr/bin/apptainer --version
[2026-01-22 04:10:47] apptainer version 1.4.0
[2026-01-22 04:10:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 04:10:47] Zen
[2026-01-22 04:10:47] apptainer works
[2026-01-22 04:10:47] Set ATHENA_PROC_NUMBER=4
[2026-01-22 04:10:47] Set ATHENA_CORE_NUMBER=4
[2026-01-22 04:10:47] Starting ATLAS job with PandaID=6976893288
[2026-01-22 04:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 05:43:30]  *** The last 200 lines of the pilot log: ***
[2026-01-22 05:43:30]  lfn=log.48299669._000272.job.log.tgz.1
[2026-01-22 05:43:30]  mtime=0
[2026-01-22 05:43:30]  protocol_id=None
[2026-01-22 05:43:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 05:43:30]  replicas=None
[2026-01-22 05:43:30]  scope=mc23_13p6TeV
[2026-01-22 05:43:30]  status=None
[2026-01-22 05:43:30]  status_code=0
[2026-01-22 05:43:30]  storage_token=
[2026-01-22 05:43:30]  surl=/home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/log.48299669._000272.job.log.tgz.1
[2026-01-22 05:43:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/2f/log.48299669._000272.job.log.tgz.1
[2026-01-22 05:43:30]  workdir=None
[2026-01-22 05:43:30] ]
[2026-01-22 05:43:30] 2026-01-21 18:42:25,070 | INFO     | transferring file log.48299669._000272.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/log.48299669._000272.job.log.tgz.1 to /home/mich
[2026-01-22 05:43:30] 2026-01-21 18:42:25,070 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/log.48299669._000272.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/0/lo
[2026-01-22 05:43:30] 2026-01-21 18:42:25,082 | INFO     | adding to output.list: log.48299669._000272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/2f/log.48299669._000272.job.log.tg
[2026-01-22 05:43:30] 2026-01-21 18:42:25,083 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 05:43:30] 2026-01-21 18:42:25,083 | INFO     | summary of transferred files:
[2026-01-22 05:43:30] 2026-01-21 18:42:25,083 | INFO     |  -- lfn=log.48299669._000272.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 05:43:30] 2026-01-21 18:42:25,083 | INFO     | stage-out finished correctly
[2026-01-22 05:43:30] 2026-01-21 18:42:26,004 | WARNING  | process 1822948 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 05:43:30] 2026-01-21 18:42:26,004 | INFO     | using path: /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 05:43:30] 2026-01-21 18:42:26,087 | INFO     | number of running child processes to parent process 1822948: 1
[2026-01-22 05:43:30] 2026-01-21 18:42:26,087 | INFO     | maximum number of monitored processes: 6
[2026-01-22 05:43:30] 2026-01-21 18:42:26,988 | INFO     | time since job start (5471s) is within the limit (349056.0s)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,580 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 05:43:30] 2026-01-21 18:42:28,595 | INFO     | monitor loop #416: job 0:6976893288 is in state 'finished'
[2026-01-22 05:43:30] 2026-01-21 18:42:28,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,632 | INFO     | job 6976893288 has state=finished
[2026-01-22 05:43:30] 2026-01-21 18:42:28,632 | INFO     | preparing for final server update for job 6976893288 in state='finished'
[2026-01-22 05:43:30] 2026-01-21 18:42:28,632 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/jobReport.json
[2026-01-22 05:43:30] 2026-01-21 18:42:28,633 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/0/workernode_map.json
[2026-01-22 05:43:30] 2026-01-21 18:42:28,634 | INFO     | this job has now completed (state=finished)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,634 | INFO     | log transfer has been attempted: DONE
[2026-01-22 05:43:30] 2026-01-21 18:42:28,634 | INFO     | job 6976893288 has finished - writing final server update
[2026-01-22 05:43:30] 2026-01-21 18:42:28,634 | INFO     | total number of processed events: 400 (read)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,637 | INFO     | using path: /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6976893288/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,637 | INFO     | extracted standard info from prmon json
[2026-01-22 05:43:30] 2026-01-21 18:42:28,637 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 05:43:30] 2026-01-21 18:42:28,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 05:43:30] 2026-01-21 18:42:28,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 05:43:30] 2026-01-21 18:42:28,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | fitting pss+swap vs Time
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | sum of square deviations: 177275882.0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | sum of deviations: 1273851470.9999998
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | mean x: 1769018299.0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | mean y: 2426269.048192771
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | intersect: -12709210175.705568
[2026-01-22 05:43:30] 2026-01-21 18:42:28,639 | INFO     | chi2: 0.0014528544015205466
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | current memory leak: 7.19 B/s (using 83 data points, chi2=0.00)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | could have reported an average CPU frequency of 4289 MHz (7 samples)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | ..............................
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . Timing measurements:
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . get job = 0 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . initial setup = 15 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . payload setup = 3 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . stage-in = 0 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . payload execution = 5451 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . stage-out = 0 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | . log creation = 0 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,640 | INFO     | ..............................
[2026-01-22 05:43:30] 2026-01-21 18:42:28,949 | INFO     | 
[2026-01-22 05:43:30] 2026-01-21 18:42:28,949 | INFO     | job summary report
[2026-01-22 05:43:30] 2026-01-21 18:42:28,950 | INFO     | --------------------------------------------------
[2026-01-22 05:43:30] 2026-01-21 18:42:28,950 | INFO     | PanDA job id: 6976893288
[2026-01-22 05:43:30] 2026-01-21 18:42:28,993 | INFO     | time since job start (5473s) is within the limit (349056.0s)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,993 | INFO     | task id: 48299669
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | errors: (none)
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | pilot state: finished 
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | transexitcode: 0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | exeerrorcode: 0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | exeerrordiag: 
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | exitcode: 0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | exitmsg: OK
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | cpuconsumptiontime: 20750 s
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | nevents: 400
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | neventsw: 0
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | pid: 1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | pgrp: 1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | corecount: 4
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | event service: False
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | sizes: {0: 2284359, 11: 2284359, 5457: 2311063, 5458: 2320138, 5461: 2320332}
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | --------------------------------------------------
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | 
[2026-01-22 05:43:30] 2026-01-21 18:42:28,994 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/0
[2026-01-22 05:43:30] 2026-01-21 18:42:29,009 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | job 6976893288 has completed (purged errors)
[2026-01-22 05:43:30] 2026-01-21 18:42:29,010 | INFO     | overall cleanup function is called
[2026-01-22 05:43:30] 2026-01-21 18:42:30,012 | INFO     | --- collectZombieJob: --- 10, [1822948]
[2026-01-22 05:43:30] 2026-01-21 18:42:30,012 | INFO     | zombie collector waiting for pid 1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:30,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 05:43:30] 2026-01-21 18:42:30,012 | INFO     | collected zombie processes
[2026-01-22 05:43:30] 2026-01-21 18:42:30,013 | INFO     | will attempt to kill all subprocesses of pid=1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:30,110 | INFO     | process IDs to be killed: [1822948] (in reverse order)
[2026-01-22 05:43:30] 2026-01-21 18:42:30,154 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 05:43:30] 2026-01-21 18:42:30,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 05:43:30] 2026-01-21 18:42:30,156 | INFO     | did not find any defunct processes belonging to 1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:30,158 | INFO     | did not find any defunct processes belonging to 1822948
[2026-01-22 05:43:30] 2026-01-21 18:42:30,158 | INFO     | ready for new job
[2026-01-22 05:43:30] 2026-01-21 18:42:30,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 05:43:30] 2026-01-21 18:42:30,159 | INFO     | **************************************
[2026-01-22 05:43:30] 2026-01-21 18:42:30,159 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 05:43:30] 2026-01-21 18:42:30,159 | INFO     | **************************************
[2026-01-22 05:43:30] 2026-01-21 18:42:30,159 | INFO     | 
[2026-01-22 05:43:30] 2026-01-21 18:42:30,160 | INFO     | architecture information:
[2026-01-22 05:43:30] 2026-01-21 18:42:30,160 | INFO     | executing command: cat /etc/os-release
[2026-01-22 05:43:30] 2026-01-21 18:42:30,170 | INFO     | cat /etc/os-release:
[2026-01-22 05:43:30] NAME="CentOS Linux"
[2026-01-22 05:43:30] VERSION="7 (Core)"
[2026-01-22 05:43:30] ID="centos"
[2026-01-22 05:43:30] ID_LIKE="rhel fedora"
[2026-01-22 05:43:30] VERSION_ID="7"
[2026-01-22 05:43:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 05:43:30] ANSI_COLOR="0;31"
[2026-01-22 05:43:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 05:43:30] HOME_URL="https://www.centos.org/"
[2026-01-22 05:43:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 05:43:30] 
[2026-01-22 05:43:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 05:43:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 05:43:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 05:43:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 05:43:30] 
[2026-01-22 05:43:30] 2026-01-21 18:42:30,170 | INFO     | **************************************
[2026-01-22 05:43:30] 2026-01-21 18:42:30,673 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/0
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | INFO     | sufficient remaining disk space (202267164672 B)
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | INFO     | update_server=False
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 05:43:30] 2026-01-21 18:42:30,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 05:43:30] 2026-01-21 18:42:31,103 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-22 05:43:30] 2026-01-21 18:42:31,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-22 05:43:30] 2026-01-21 18:42:31,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 05:43:30] 2026-01-21 18:42:31,104 | INFO     | will abort loop
[2026-01-22 05:43:30] 2026-01-21 18:42:31,359 | INFO     | all job control threads have been joined
[2026-01-22 05:43:30] 2026-01-21 18:42:31,613 | INFO     | all data control threads have been joined
[2026-01-22 05:43:30] 2026-01-21 18:42:31,689 | INFO     | [job] retrieve thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:31,702 | INFO     | [payload] failed_post thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:31,745 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:31,881 | INFO     | all payload control threads have been joined
[2026-01-22 05:43:30] 2026-01-21 18:42:32,030 | INFO     | [data] copytool_in thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,109 | INFO     | [job] job monitor thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,204 | INFO     | [payload] validate_post thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,364 | INFO     | [job] control thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,618 | INFO     | [data] control thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,689 | INFO     | [data] copytool_out thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,886 | INFO     | [payload] control thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:32,949 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:33,035 | INFO     | [job] validate thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:33,179 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:33,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 05:43:30] 2026-01-21 18:42:34,682 | INFO     | [job] queue monitor thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:34,689 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:42:41,289 | INFO     | job.realtimelogging is not enabled
[2026-01-22 05:43:30] 2026-01-21 18:42:42,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 05:43:30] 2026-01-21 18:43:23,440 | INFO     | [monitor] cgroup control has ended
[2026-01-22 05:43:30] 2026-01-21 18:43:24,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127406895392576)>', '<ExcThread(monitor, started 127406538991360)>']
[2026-01-22 05:43:30] 2026-01-21 18:43:24,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 05:43:30] 2026-01-21 18:43:24,940 | INFO     | [monitor] control thread has ended
[2026-01-22 05:43:30] 2026-01-21 18:43:29,838 | INFO     | all workflow threads have been joined
[2026-01-22 05:43:30] 2026-01-21 18:43:29,839 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 05:43:30] 2026-01-21 18:43:29,839 | INFO     | traces error code: 0
[2026-01-22 05:43:30] 2026-01-21 18:43:29,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 05:43:30] 2026-01-21 18:43:29,930 [wrapper] ==== pilot stdout END ====
[2026-01-22 05:43:30] 2026-01-21 18:43:29,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 05:43:30] 2026-01-21 18:43:29,934 [wrapper] pilotpid: 1818429
[2026-01-22 05:43:30] 2026-01-21 18:43:29,936 [wrapper] Pilot exit status: 0
[2026-01-22 05:43:30] 2026-01-21 18:43:29,942 [wrapper] pandaids: 6976893288
[2026-01-22 05:43:30] 2026-01-21 18:43:29,975 [wrapper] cleanup supervisor_pilot 1884862 1818430
[2026-01-22 05:43:30] 2026-01-21 18:43:29,977 [wrapper] Test setup, not cleaning
[2026-01-22 05:43:30] 2026-01-21 18:43:29,979 [wrapper] apfmon messages muted
[2026-01-22 05:43:30] 2026-01-21 18:43:29,981 [wrapper] ==== wrapper stdout END ====
[2026-01-22 05:43:30] 2026-01-21 18:43:29,982 [wrapper] ==== wrapper stderr END ====
[2026-01-22 05:43:30]  *** Error codes and diagnostics ***
[2026-01-22 05:43:30]     "exeErrorCode": 0,
[2026-01-22 05:43:30]     "exeErrorDiag": "",
[2026-01-22 05:43:30]     "pilotErrorCode": 0,
[2026-01-22 05:43:30]     "pilotErrorDiag": "",
[2026-01-22 05:43:30]  *** Listing of results directory ***
[2026-01-22 05:43:30] total 416128
[2026-01-22 05:43:30] -rw-r--r-- 1 michael michael    584422 Jan 21 08:34 pilot3.tar.gz
[2026-01-22 05:43:30] -rwx------ 1 michael michael     36322 Jan 21 08:38 runpilot2-wrapper.sh
[2026-01-22 05:43:30] -rw-r--r-- 1 michael michael      5111 Jan 21 08:39 queuedata.json
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael       100 Jan 22 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 05:43:30] -rwxr-xr-x 1 michael michael      7986 Jan 22 04:10 run_atlas
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael       105 Jan 22 04:10 job.xml
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael 250128790 Jan 22 04:10 EVNT.48299667._000013.pool.root.1
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael      9823 Jan 22 04:10 init_data.xml
[2026-01-22 05:43:30] drwxrwx--x 2 michael michael      4096 Jan 22 04:10 shared
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael    597769 Jan 22 04:10 input.tar.gz
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael     15845 Jan 22 04:10 start_atlas.sh
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael         0 Jan 22 04:10 boinc_lockfile
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael      2597 Jan 22 04:10 pandaJob.out
[2026-01-22 05:43:30] -rw------- 1 michael michael        50 Jan 22 04:10 setup.sh.local
[2026-01-22 05:43:30] -rw------- 1 michael michael   1002771 Jan 22 04:11 agis_schedconf.cvmfs.json
[2026-01-22 05:43:30] -rw------- 1 michael michael   1516246 Jan 22 04:11 agis_ddmendpoints.agis.ALL.json
[2026-01-22 05:43:30] -rw------- 1 michael michael       417 Jan 22 04:11 workernode_map.json
[2026-01-22 05:43:30] drwx------ 5 michael michael      4096 Jan 22 04:11 pilot3
[2026-01-22 05:43:30] -rw------- 1 michael michael        95 Jan 22 05:41 pilot_heartbeat.json
[2026-01-22 05:43:30] -rw------- 1 michael michael 169824747 Jan 22 05:42 HITS.48299669._000272.pool.root.1
[2026-01-22 05:43:30] -rw------- 1 michael michael      1025 Jan 22 05:42 memory_monitor_summary.json
[2026-01-22 05:43:30] -rw------- 1 michael michael    289291 Jan 22 05:42 log.48299669._000272.job.log.tgz.1
[2026-01-22 05:43:30] -rw------- 1 michael michael      6265 Jan 22 05:42 heartbeat.json
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael       529 Jan 22 05:42 boinc_task_state.xml
[2026-01-22 05:43:30] -rw------- 1 michael michael      4818 Jan 22 05:43 pilotlog.txt
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael      8192 Jan 22 05:43 boinc_mmap_file
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael        27 Jan 22 05:43 wrapper_checkpoint.txt
[2026-01-22 05:43:30] -rw------- 1 michael michael    816714 Jan 22 05:43 log.48299669._000272.job.log.1
[2026-01-22 05:43:30] -rw------- 1 michael michael       357 Jan 22 05:43 output.list
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael       620 Jan 22 05:43 runtime_log
[2026-01-22 05:43:30] -rw------- 1 michael michael   1126400 Jan 22 05:43 result.tar.gz
[2026-01-22 05:43:30] -rw------- 1 michael michael       637 Jan 22 05:43 wk1MDmTbY28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm02wKDmMwWj3m.diag
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael      9444 Jan 22 05:43 runtime_log.err
[2026-01-22 05:43:30] -rw-rw-r-- 1 michael michael     21343 Jan 22 05:43 stderr.txt
[2026-01-22 05:43:30] HITS file was successfully produced:
[2026-01-22 05:43:30] -rw------- 1 michael michael 169824747 Jan 22 05:42 shared/HITS.pool.root.1
[2026-01-22 05:43:30]  *** Contents of shared directory: ***
[2026-01-22 05:43:30] total 411824
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael 250128790 Jan 22 04:10 ATLAS.root_0
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael    597769 Jan 22 04:10 input.tar.gz
[2026-01-22 05:43:30] -rw-r--r-- 2 michael michael     15845 Jan 22 04:10 start_atlas.sh
[2026-01-22 05:43:30] -rw------- 1 michael michael 169824747 Jan 22 05:42 HITS.pool.root.1
[2026-01-22 05:43:30] -rw------- 1 michael michael   1126400 Jan 22 05:43 result.tar.gz
05:43:31 (1814249): run_atlas exited; CPU time 20807.899465
05:43:31 (1814249): called boinc_finish(0)

</stderr_txt>
]]>

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