Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:49:23 (1781832): wrapper (7.7.26015): starting
02:49:23 (1781832): wrapper: running run_atlas (--nthreads 4)
[2026-01-22 02:49:23] Arguments: --nthreads 4
[2026-01-22 02:49:23] Threads: 4
[2026-01-22 02:49:23] Checking for CVMFS
[2026-01-22 02:49:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 02:49:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 02:49:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 02:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 02:49:24] 2.13.3.0 897907 1256 55656 155392 1 188 5596852 6144001 2733 130560 0 2104877 99.995 40465 112 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-22 02:49:24] CVMFS is ok
[2026-01-22 02:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 02:49:24] Checking for apptainer binary...
[2026-01-22 02:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 02:49:24] Running /usr/bin/apptainer --version
[2026-01-22 02:49:24] apptainer version 1.4.0
[2026-01-22 02:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 02:49:24] Zen
[2026-01-22 02:49:24] apptainer works
[2026-01-22 02:49:24] Set ATHENA_PROC_NUMBER=4
[2026-01-22 02:49:24] Set ATHENA_CORE_NUMBER=4
[2026-01-22 02:49:24] Starting ATLAS job with PandaID=6976832201
[2026-01-22 02:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 04:13:52]  *** The last 200 lines of the pilot log: ***
[2026-01-22 04:13:52]  filesize=273933
[2026-01-22 04:13:52]  filetype=log
[2026-01-22 04:13:52]  guid=ed99a9a9-ef4f-4731-8c62-142313e5b3b1
[2026-01-22 04:13:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 04:13:52]  is_altstaged=None
[2026-01-22 04:13:52]  is_tar=False
[2026-01-22 04:13:52]  lfn=log.48299637._000141.job.log.tgz.1
[2026-01-22 04:13:52]  mtime=0
[2026-01-22 04:13:52]  protocol_id=None
[2026-01-22 04:13:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 04:13:52]  replicas=None
[2026-01-22 04:13:52]  scope=mc23_13p6TeV
[2026-01-22 04:13:52]  status=None
[2026-01-22 04:13:52]  status_code=0
[2026-01-22 04:13:52]  storage_token=
[2026-01-22 04:13:52]  surl=/home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6976832201/log.48299637._000141.job.log.tgz.1
[2026-01-22 04:13:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/22/log.48299637._000141.job.log.tgz.1
[2026-01-22 04:13:52]  workdir=None
[2026-01-22 04:13:52] ]
[2026-01-22 04:13:52] 2026-01-21 17:12:48,154 | INFO     | transferring file log.48299637._000141.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6976832201/log.48299637._000141.job.log.tgz.1 to /home/mich
[2026-01-22 04:13:52] 2026-01-21 17:12:48,154 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6976832201/log.48299637._000141.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/2/lo
[2026-01-22 04:13:52] 2026-01-21 17:12:48,165 | INFO     | adding to output.list: log.48299637._000141.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/22/log.48299637._000141.job.log.tg
[2026-01-22 04:13:52] 2026-01-21 17:12:48,165 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 04:13:52] 2026-01-21 17:12:48,165 | INFO     | summary of transferred files:
[2026-01-22 04:13:52] 2026-01-21 17:12:48,165 | INFO     |  -- lfn=log.48299637._000141.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 04:13:52] 2026-01-21 17:12:48,165 | INFO     | stage-out finished correctly
[2026-01-22 04:13:52] 2026-01-21 17:12:48,925 | INFO     | time since job start (4989s) is within the limit (349056.0s)
[2026-01-22 04:13:52] 2026-01-21 17:12:50,306 | INFO     | monitor loop #381: job 0:6976832201 is in state 'finished'
[2026-01-22 04:13:52] 2026-01-21 17:12:50,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-22 04:13:52] 2026-01-21 17:12:50,538 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 04:13:52] 2026-01-21 17:12:50,931 | INFO     | time since job start (4991s) is within the limit (349056.0s)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,993 | INFO     | job 6976832201 has state=finished
[2026-01-22 04:13:52] 2026-01-21 17:12:51,993 | INFO     | preparing for final server update for job 6976832201 in state='finished'
[2026-01-22 04:13:52] 2026-01-21 17:12:51,993 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6976832201/jobReport.json
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/2/workernode_map.json
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | this job has now completed (state=finished)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | log transfer has been attempted: DONE
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | job 6976832201 has finished - writing final server update
[2026-01-22 04:13:52] 2026-01-21 17:12:51,994 | INFO     | total number of processed events: 400 (read)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-6976832201/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | INFO     | extracted standard info from prmon json
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 04:13:52] 2026-01-21 17:12:51,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | fitting pss+swap vs Time
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | sum of square deviations: 130793150.0
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | sum of deviations: 101815405.00000006
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | mean x: 1769013160.0
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | mean y: 2434815.88
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | intersect: -1374646409.97724
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | chi2: 0.0018934296779402886
[2026-01-22 04:13:52] 2026-01-21 17:12:51,997 | INFO     | current memory leak: 0.78 B/s (using 75 data points, chi2=0.00)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | could have reported an average CPU frequency of 4086 MHz (6 samples)
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | ..............................
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . Timing measurements:
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . get job = 0 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . initial setup = 8 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . payload setup = 4 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . stage-in = 0 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . payload execution = 4969 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . stage-out = 0 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | . log creation = 0 s
[2026-01-22 04:13:52] 2026-01-21 17:12:51,998 | INFO     | ..............................
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | 
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | job summary report
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | --------------------------------------------------
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | PanDA job id: 6976832201
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | task id: 48299637
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | errors: (none)
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | pilot state: finished 
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | transexitcode: 0
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | exeerrorcode: 0
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | exeerrordiag: 
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | exitcode: 0
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | exitmsg: OK
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | cpuconsumptiontime: 18725 s
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | nevents: 400
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | neventsw: 0
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | pid: 1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | pgrp: 1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:52,026 | INFO     | corecount: 4
[2026-01-22 04:13:52] 2026-01-21 17:12:52,027 | INFO     | event service: False
[2026-01-22 04:13:52] 2026-01-21 17:12:52,027 | INFO     | sizes: {0: 2283281, 1: 2284410, 11: 2284410, 4977: 2310826, 4978: 2319846, 4980: 2319902, 4982: 2320224}
[2026-01-22 04:13:52] 2026-01-21 17:12:52,027 | INFO     | --------------------------------------------------
[2026-01-22 04:13:52] 2026-01-21 17:12:52,027 | INFO     | 
[2026-01-22 04:13:52] 2026-01-21 17:12:52,027 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/2
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | job 6976832201 has completed (purged errors)
[2026-01-22 04:13:52] 2026-01-21 17:12:52,040 | INFO     | overall cleanup function is called
[2026-01-22 04:13:52] 2026-01-21 17:12:53,047 | INFO     | --- collectZombieJob: --- 10, [1790160]
[2026-01-22 04:13:52] 2026-01-21 17:12:53,047 | INFO     | zombie collector waiting for pid 1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:53,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 04:13:52] 2026-01-21 17:12:53,047 | INFO     | collected zombie processes
[2026-01-22 04:13:52] 2026-01-21 17:12:53,047 | INFO     | will attempt to kill all subprocesses of pid=1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:53,124 | INFO     | process IDs to be killed: [1790160] (in reverse order)
[2026-01-22 04:13:52] 2026-01-21 17:12:53,155 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 04:13:52] 2026-01-21 17:12:53,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 04:13:52] 2026-01-21 17:12:53,157 | INFO     | did not find any defunct processes belonging to 1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:53,159 | INFO     | did not find any defunct processes belonging to 1790160
[2026-01-22 04:13:52] 2026-01-21 17:12:53,159 | INFO     | ready for new job
[2026-01-22 04:13:52] 2026-01-21 17:12:53,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 04:13:52] 2026-01-21 17:12:53,160 | INFO     | **************************************
[2026-01-22 04:13:52] 2026-01-21 17:12:53,160 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 04:13:52] 2026-01-21 17:12:53,160 | INFO     | **************************************
[2026-01-22 04:13:52] 2026-01-21 17:12:53,160 | INFO     | 
[2026-01-22 04:13:52] 2026-01-21 17:12:53,161 | INFO     | architecture information:
[2026-01-22 04:13:52] 2026-01-21 17:12:53,161 | INFO     | executing command: cat /etc/os-release
[2026-01-22 04:13:52] 2026-01-21 17:12:53,168 | INFO     | cat /etc/os-release:
[2026-01-22 04:13:52] NAME="CentOS Linux"
[2026-01-22 04:13:52] VERSION="7 (Core)"
[2026-01-22 04:13:52] ID="centos"
[2026-01-22 04:13:52] ID_LIKE="rhel fedora"
[2026-01-22 04:13:52] VERSION_ID="7"
[2026-01-22 04:13:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 04:13:52] ANSI_COLOR="0;31"
[2026-01-22 04:13:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 04:13:52] HOME_URL="https://www.centos.org/"
[2026-01-22 04:13:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 04:13:52] 
[2026-01-22 04:13:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 04:13:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 04:13:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 04:13:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 04:13:52] 
[2026-01-22 04:13:52] 2026-01-21 17:12:53,169 | INFO     | **************************************
[2026-01-22 04:13:52] 2026-01-21 17:12:53,671 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/2
[2026-01-22 04:13:52] 2026-01-21 17:12:53,682 | INFO     | sufficient remaining disk space (202984390656 B)
[2026-01-22 04:13:52] 2026-01-21 17:12:53,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 04:13:52] 2026-01-21 17:12:53,683 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 04:13:52] 2026-01-21 17:12:53,683 | INFO     | update_server=False
[2026-01-22 04:13:52] 2026-01-21 17:12:53,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 04:13:52] 2026-01-21 17:12:53,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 04:13:52] 2026-01-21 17:12:53,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 04:13:52] 2026-01-21 17:12:53,702 | INFO     | all payload control threads have been joined
[2026-01-22 04:13:52] 2026-01-21 17:12:53,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 04:13:52] 2026-01-21 17:12:53,815 | INFO     | aborting loop
[2026-01-22 04:13:52] 2026-01-21 17:12:53,882 | INFO     | all data control threads have been joined
[2026-01-22 04:13:52] 2026-01-21 17:12:54,688 | INFO     | [job] retrieve thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,688 | INFO     | [job] queue monitor thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,707 | INFO     | [payload] control thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,716 | INFO     | [payload] failed_post thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,784 | INFO     | [data] copytool_in thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,820 | INFO     | [job] job monitor thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:54,887 | INFO     | [data] control thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:55,203 | INFO     | all job control threads have been joined
[2026-01-22 04:13:52] 2026-01-21 17:12:55,490 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:55,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:55,706 | INFO     | [data] copytool_out thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:55,951 | INFO     | [job] validate thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:56,023 | INFO     | [payload] validate_post thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:56,027 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:56,030 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:56,208 | INFO     | [job] control thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:12:56,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 04:13:52] 2026-01-21 17:13:00,576 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 04:13:52] 2026-01-21 17:13:24,082 | INFO     | PID=1785643 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-22 04:13:52] 2026-01-21 17:13:24,082 | INFO     | .. there are 4 such processes running
[2026-01-22 04:13:52] 2026-01-21 17:13:24,083 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 04:13:52] 2026-01-21 17:13:24,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 04:13:52] 2026-01-21 17:13:24,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 04:13:52] 2026-01-21 17:13:46,698 | INFO     | [monitor] cgroup control has ended
[2026-01-22 04:13:52] 2026-01-21 17:13:47,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135704037418816)>', '<ExcThread(monitor, started 135703551784704)>']
[2026-01-22 04:13:52] 2026-01-21 17:13:48,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 04:13:52] 2026-01-21 17:13:48,201 | INFO     | [monitor] control thread has ended
[2026-01-22 04:13:52] 2026-01-21 17:13:52,455 | INFO     | all workflow threads have been joined
[2026-01-22 04:13:52] 2026-01-21 17:13:52,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 04:13:52] 2026-01-21 17:13:52,456 | INFO     | traces error code: 0
[2026-01-22 04:13:52] 2026-01-21 17:13:52,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 04:13:52] 2026-01-21 17:13:52,507 [wrapper] ==== pilot stdout END ====
[2026-01-22 04:13:52] 2026-01-21 17:13:52,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 04:13:52] 2026-01-21 17:13:52,511 [wrapper] pilotpid: 1785643
[2026-01-22 04:13:52] 2026-01-21 17:13:52,512 [wrapper] Pilot exit status: 0
[2026-01-22 04:13:52] 2026-01-21 17:13:52,518 [wrapper] pandaids: 6976832201
[2026-01-22 04:13:52] 2026-01-21 17:13:52,539 [wrapper] cleanup supervisor_pilot 1814100 1785644
[2026-01-22 04:13:52] 2026-01-21 17:13:52,540 [wrapper] Test setup, not cleaning
[2026-01-22 04:13:52] 2026-01-21 17:13:52,542 [wrapper] apfmon messages muted
[2026-01-22 04:13:52] 2026-01-21 17:13:52,544 [wrapper] ==== wrapper stdout END ====
[2026-01-22 04:13:52] 2026-01-21 17:13:52,545 [wrapper] ==== wrapper stderr END ====
[2026-01-22 04:13:52]  *** Error codes and diagnostics ***
[2026-01-22 04:13:52]     "exeErrorCode": 0,
[2026-01-22 04:13:52]     "exeErrorDiag": "",
[2026-01-22 04:13:52]     "pilotErrorCode": 0,
[2026-01-22 04:13:52]     "pilotErrorDiag": "",
[2026-01-22 04:13:52]  *** Listing of results directory ***
[2026-01-22 04:13:52] total 425760
[2026-01-22 04:13:52] -rw-r--r-- 1 michael michael    584422 Jan 21 05:43 pilot3.tar.gz
[2026-01-22 04:13:52] -rw-r--r-- 1 michael michael      5111 Jan 21 06:33 queuedata.json
[2026-01-22 04:13:52] -rwx------ 1 michael michael     36322 Jan 21 06:33 runpilot2-wrapper.sh
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael       100 Jan 22 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 04:13:52] -rwxr-xr-x 1 michael michael      7986 Jan 22 02:49 run_atlas
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael       105 Jan 22 02:49 job.xml
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael 256309177 Jan 22 02:49 EVNT.48299635._000006.pool.root.1
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael      9823 Jan 22 02:49 init_data.xml
[2026-01-22 04:13:52] drwxrwx--x 2 michael michael      4096 Jan 22 02:49 shared
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael    597766 Jan 22 02:49 input.tar.gz
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael     15845 Jan 22 02:49 start_atlas.sh
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael         0 Jan 22 02:49 boinc_lockfile
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael      2617 Jan 22 02:49 pandaJob.out
[2026-01-22 04:13:52] -rw------- 1 michael michael        50 Jan 22 02:49 setup.sh.local
[2026-01-22 04:13:52] -rw------- 1 michael michael   1002771 Jan 22 02:49 agis_schedconf.cvmfs.json
[2026-01-22 04:13:52] -rw------- 1 michael michael   1516246 Jan 22 02:49 agis_ddmendpoints.agis.ALL.json
[2026-01-22 04:13:52] -rw------- 1 michael michael       418 Jan 22 02:49 workernode_map.json
[2026-01-22 04:13:52] drwx------ 5 michael michael      4096 Jan 22 02:49 pilot3
[2026-01-22 04:13:52] -rw------- 1 michael michael 173670735 Jan 22 04:12 HITS.48299637._000141.pool.root.1
[2026-01-22 04:13:52] -rw------- 1 michael michael      1022 Jan 22 04:12 memory_monitor_summary.json
[2026-01-22 04:13:52] -rw------- 1 michael michael    273933 Jan 22 04:12 log.48299637._000141.job.log.tgz.1
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael       529 Jan 22 04:12 boinc_task_state.xml
[2026-01-22 04:13:52] -rw------- 1 michael michael      6255 Jan 22 04:12 heartbeat.json
[2026-01-22 04:13:52] -rw------- 1 michael michael        95 Jan 22 04:13 pilot_heartbeat.json
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael        27 Jan 22 04:13 wrapper_checkpoint.txt
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael      8192 Jan 22 04:13 boinc_mmap_file
[2026-01-22 04:13:52] -rw------- 1 michael michael      4831 Jan 22 04:13 pilotlog.txt
[2026-01-22 04:13:52] -rw------- 1 michael michael    749833 Jan 22 04:13 log.48299637._000141.job.log.1
[2026-01-22 04:13:52] -rw------- 1 michael michael       357 Jan 22 04:13 output.list
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael       620 Jan 22 04:13 runtime_log
[2026-01-22 04:13:52] -rw------- 1 michael michael   1044480 Jan 22 04:13 result.tar.gz
[2026-01-22 04:13:52] -rw------- 1 michael michael       638 Jan 22 04:13 yqMMDmjeW28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcTwKDmrHp0nn.diag
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael      9444 Jan 22 04:13 runtime_log.err
[2026-01-22 04:13:52] -rw-rw-r-- 1 michael michael     20973 Jan 22 04:13 stderr.txt
[2026-01-22 04:13:52] HITS file was successfully produced:
[2026-01-22 04:13:52] -rw------- 1 michael michael 173670735 Jan 22 04:12 shared/HITS.pool.root.1
[2026-01-22 04:13:52]  *** Contents of shared directory: ***
[2026-01-22 04:13:52] total 421536
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael 256309177 Jan 22 02:49 ATLAS.root_0
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael    597766 Jan 22 02:49 input.tar.gz
[2026-01-22 04:13:52] -rw-r--r-- 2 michael michael     15845 Jan 22 02:49 start_atlas.sh
[2026-01-22 04:13:52] -rw------- 1 michael michael 173670735 Jan 22 04:12 HITS.pool.root.1
[2026-01-22 04:13:52] -rw------- 1 michael michael   1044480 Jan 22 04:13 result.tar.gz
04:13:53 (1781832): run_atlas exited; CPU time 18782.067111
04:13:53 (1781832): called boinc_finish(0)

</stderr_txt>
]]>

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