Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:26:56 (123174): wrapper (7.7.26015): starting
07:26:56 (123174): wrapper: running run_atlas (--nthreads 3)
[2026-01-21 07:26:56] Arguments: --nthreads 3
[2026-01-21 07:26:56] Threads: 3
[2026-01-21 07:26:56] Checking for CVMFS
[2026-01-21 07:26:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 07:26:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 07:26:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 07:26:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 07:26:57] 2.9.2.0 10102 747 58416 155374 2 49 19492146 36864000 0 130560 0 320594 99.970 31207 7928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-21 07:26:57] CVMFS is ok
[2026-01-21 07:26:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-21 07:26:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-21 07:26:57] Further information can be found at the LHC@home message board.
[2026-01-21 07:26:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 07:26:57] Checking for apptainer binary...
[2026-01-21 07:26:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 07:26:57] Running /usr/bin/apptainer --version
[2026-01-21 07:26:57] apptainer version 1.3.6-6.1
[2026-01-21 07:26:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 07:26:58] atlasA226
[2026-01-21 07:26:58] apptainer works
[2026-01-21 07:26:58] Set ATHENA_PROC_NUMBER=3
[2026-01-21 07:26:58] Set ATHENA_CORE_NUMBER=3
[2026-01-21 07:26:58] Starting ATLAS job with PandaID=6976935220
[2026-01-21 07:26:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 08:54:28]  *** The last 200 lines of the pilot log: ***
[2026-01-21 08:54:28]  domain=
[2026-01-21 08:54:28]  filesize=258308
[2026-01-21 08:54:28]  filetype=log
[2026-01-21 08:54:28]  guid=fcfce2ac-b445-4925-99db-2544539e7147
[2026-01-21 08:54:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-21 08:54:28]  is_altstaged=None
[2026-01-21 08:54:28]  is_tar=False
[2026-01-21 08:54:28]  lfn=log.48299517._000945.job.log.tgz.1
[2026-01-21 08:54:28]  mtime=0
[2026-01-21 08:54:28]  protocol_id=None
[2026-01-21 08:54:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 08:54:28]  replicas=None
[2026-01-21 08:54:28]  scope=mc23_13p6TeV
[2026-01-21 08:54:28]  status=None
[2026-01-21 08:54:28]  status_code=0
[2026-01-21 08:54:28]  storage_token=
[2026-01-21 08:54:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6976935220/log.48299517._000945.job.log.tgz.1
[2026-01-21 08:54:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/80/log.48299517._000945.job.log.tgz.1
[2026-01-21 08:54:28]  workdir=None
[2026-01-21 08:54:28] ]
[2026-01-21 08:54:28] 2026-01-21 07:53:47,108 | INFO     | transferring file log.48299517._000945.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6976935220/log.48299517._000945.job.log.tgz.1 to /local/data/boinc/
[2026-01-21 08:54:28] 2026-01-21 07:53:47,108 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6976935220/log.48299517._000945.job.log.tgz.1 /local/data/boinc/slots/0/log.48299517._0009
[2026-01-21 08:54:28] 2026-01-21 07:53:47,120 | INFO     | adding to output.list: log.48299517._000945.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/80/log.48299517._000945.job.log.tg
[2026-01-21 08:54:28] 2026-01-21 07:53:47,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 08:54:28] 2026-01-21 07:53:47,121 | INFO     | summary of transferred files:
[2026-01-21 08:54:28] 2026-01-21 07:53:47,121 | INFO     |  -- lfn=log.48299517._000945.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 08:54:28] 2026-01-21 07:53:47,121 | INFO     | stage-out finished correctly
[2026-01-21 08:54:28] 2026-01-21 07:53:48,109 | INFO     | time since job start (5193s) is within the limit (349056.0s)
[2026-01-21 08:54:28] 2026-01-21 07:53:48,187 | INFO     | monitor loop #402: job 0:6976935220 is in state 'finished'
[2026-01-21 08:54:28] 2026-01-21 07:53:48,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 08:54:28] 2026-01-21 07:53:49,251 | INFO     | job 6976935220 has state=finished
[2026-01-21 08:54:28] 2026-01-21 07:53:49,251 | INFO     | preparing for final server update for job 6976935220 in state='finished'
[2026-01-21 08:54:28] 2026-01-21 07:53:49,251 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6976935220/jobReport.json
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | this job has now completed (state=finished)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | log transfer has been attempted: DONE
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | job 6976935220 has finished - writing final server update
[2026-01-21 08:54:28] 2026-01-21 07:53:49,252 | INFO     | total number of processed events: 400 (read)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,253 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6976935220/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,254 | INFO     | extracted standard info from prmon json
[2026-01-21 08:54:28] 2026-01-21 07:53:49,254 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 08:54:28] 2026-01-21 07:53:49,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 08:54:28] 2026-01-21 07:53:49,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 08:54:28] 2026-01-21 07:53:49,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | fitting pss+swap vs Time
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | sum of square deviations: 147126479.5
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | sum of deviations: -10333439467.0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | mean x: 1768979509.5
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | mean y: 2550498.6153846155
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | intersect: 124246960763.19731
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | chi2: 0.05511037188288488
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | current memory leak: -70.24 B/s (using 78 data points, chi2=0.06)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | could have reported an average CPU frequency of 4379 MHz (6 samples)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | ..............................
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . Timing measurements:
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . get job = 0 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . initial setup = 5 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . payload setup = 6 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . stage-in = 0 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . payload execution = 5170 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . stage-out = 0 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | . log creation = 0 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,255 | INFO     | ..............................
[2026-01-21 08:54:28] 2026-01-21 07:53:49,423 | INFO     | 
[2026-01-21 08:54:28] 2026-01-21 07:53:49,423 | INFO     | job summary report
[2026-01-21 08:54:28] 2026-01-21 07:53:49,423 | INFO     | --------------------------------------------------
[2026-01-21 08:54:28] 2026-01-21 07:53:49,423 | INFO     | PanDA job id: 6976935220
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | task id: 48299517
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | errors: (none)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | pilot state: finished 
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | transexitcode: 0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | exeerrorcode: 0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,424 | INFO     | exeerrordiag: 
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | exitcode: 0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | exitmsg: OK
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | cpuconsumptiontime: 14830 s
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | nevents: 400
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | neventsw: 0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | pid: 131667
[2026-01-21 08:54:28] 2026-01-21 07:53:49,425 | INFO     | pgrp: 131667
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | corecount: 3
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | event service: False
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | sizes: {0: 2284335, 10: 2284335, 5181: 2319882, 5183: 2320076}
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | --------------------------------------------------
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | 
[2026-01-21 08:54:28] 2026-01-21 07:53:49,426 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-21 08:54:28] 2026-01-21 07:53:49,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 08:54:28] 2026-01-21 07:53:49,476 | INFO     | job 6976935220 has completed (purged errors)
[2026-01-21 08:54:28] 2026-01-21 07:53:49,476 | INFO     | overall cleanup function is called
[2026-01-21 08:54:28] 2026-01-21 07:53:50,485 | INFO     | --- collectZombieJob: --- 10, [131667]
[2026-01-21 08:54:28] 2026-01-21 07:53:50,485 | INFO     | zombie collector waiting for pid 131667
[2026-01-21 08:54:28] 2026-01-21 07:53:50,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 08:54:28] 2026-01-21 07:53:50,485 | INFO     | collected zombie processes
[2026-01-21 08:54:28] 2026-01-21 07:53:50,486 | INFO     | will attempt to kill all subprocesses of pid=131667
[2026-01-21 08:54:28] 2026-01-21 07:53:50,526 | INFO     | process IDs to be killed: [131667] (in reverse order)
[2026-01-21 08:54:28] 2026-01-21 07:53:50,552 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 08:54:28] 2026-01-21 07:53:50,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 08:54:28] 2026-01-21 07:53:50,553 | INFO     | did not find any defunct processes belonging to 131667
[2026-01-21 08:54:28] 2026-01-21 07:53:50,554 | INFO     | did not find any defunct processes belonging to 131667
[2026-01-21 08:54:28] 2026-01-21 07:53:50,554 | INFO     | ready for new job
[2026-01-21 08:54:28] 2026-01-21 07:53:50,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | **************************************
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | **************************************
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | 
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | architecture information:
[2026-01-21 08:54:28] 2026-01-21 07:53:50,555 | INFO     | executing command: cat /etc/os-release
[2026-01-21 08:54:28] 2026-01-21 07:53:50,565 | INFO     | cat /etc/os-release:
[2026-01-21 08:54:28] NAME="CentOS Linux"
[2026-01-21 08:54:28] VERSION="7 (Core)"
[2026-01-21 08:54:28] ID="centos"
[2026-01-21 08:54:28] ID_LIKE="rhel fedora"
[2026-01-21 08:54:28] VERSION_ID="7"
[2026-01-21 08:54:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 08:54:28] ANSI_COLOR="0;31"
[2026-01-21 08:54:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 08:54:28] HOME_URL="https://www.centos.org/"
[2026-01-21 08:54:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 08:54:28] 
[2026-01-21 08:54:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 08:54:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 08:54:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 08:54:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 08:54:28] 
[2026-01-21 08:54:28] 2026-01-21 07:53:50,565 | INFO     | **************************************
[2026-01-21 08:54:28] 2026-01-21 07:53:51,069 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-21 08:54:28] 2026-01-21 07:53:51,082 | INFO     | sufficient remaining disk space (336318169088 B)
[2026-01-21 08:54:28] 2026-01-21 07:53:51,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 08:54:28] 2026-01-21 07:53:51,082 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 08:54:28] 2026-01-21 07:53:51,082 | INFO     | update_server=False
[2026-01-21 08:54:28] 2026-01-21 07:53:51,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 08:54:28] 2026-01-21 07:53:51,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 08:54:28] 2026-01-21 07:53:51,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 08:54:28] 2026-01-21 07:53:51,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 08:54:28] 2026-01-21 07:53:51,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 08:54:28] 2026-01-21 07:53:51,696 | INFO     | aborting loop
[2026-01-21 08:54:28] 2026-01-21 07:53:51,980 | INFO     | all job control threads have been joined
[2026-01-21 08:54:28] 2026-01-21 07:53:52,002 | INFO     | all data control threads have been joined
[2026-01-21 08:54:28] 2026-01-21 07:53:52,088 | INFO     | [job] retrieve thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,089 | INFO     | [job] queue monitor thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,322 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,333 | INFO     | [job] validate thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,419 | INFO     | [data] copytool_in thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,437 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,457 | INFO     | all payload control threads have been joined
[2026-01-21 08:54:28] 2026-01-21 07:53:52,492 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,650 | INFO     | [payload] validate_post thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,702 | INFO     | [job] job monitor thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:52,986 | INFO     | [job] control thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:53,008 | INFO     | [data] control thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:53,089 | INFO     | [data] copytool_out thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:53,235 | INFO     | [payload] failed_post thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:53,463 | INFO     | [payload] control thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:53:55,090 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:54:01,235 | INFO     | job.realtimelogging is not enabled
[2026-01-21 08:54:28] 2026-01-21 07:54:02,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 08:54:28] 2026-01-21 07:54:21,225 | INFO     | PID=127223 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-21 08:54:28] 2026-01-21 07:54:21,225 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 08:54:28] 2026-01-21 07:54:21,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 08:54:28] 2026-01-21 07:54:21,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 08:54:28] 2026-01-21 07:54:22,127 | INFO     | [monitor] cgroup control has ended
[2026-01-21 08:54:28] 2026-01-21 07:54:23,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160458762048)>', '<ExcThread(monitor, started 140159588747008)>']
[2026-01-21 08:54:28] 2026-01-21 07:54:24,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 08:54:28] 2026-01-21 07:54:24,242 | INFO     | [monitor] control thread has ended
[2026-01-21 08:54:28] 2026-01-21 07:54:28,755 | INFO     | all workflow threads have been joined
[2026-01-21 08:54:28] 2026-01-21 07:54:28,756 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 08:54:28] 2026-01-21 07:54:28,756 | INFO     | traces error code: 0
[2026-01-21 08:54:28] 2026-01-21 07:54:28,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 08:54:28] 2026-01-21 07:54:28,804 [wrapper] ==== pilot stdout END ====
[2026-01-21 08:54:28] 2026-01-21 07:54:28,807 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 08:54:28] 2026-01-21 07:54:28,811 [wrapper] pilotpid: 127223
[2026-01-21 08:54:28] 2026-01-21 07:54:28,813 [wrapper] Pilot exit status: 0
[2026-01-21 08:54:28] 2026-01-21 07:54:28,821 [wrapper] pandaids: 6976935220
[2026-01-21 08:54:28] 2026-01-21 07:54:28,838 [wrapper] cleanup supervisor_pilot  136791 127224
[2026-01-21 08:54:28] 2026-01-21 07:54:28,841 [wrapper] Test setup, not cleaning
[2026-01-21 08:54:28] 2026-01-21 07:54:28,844 [wrapper] apfmon messages muted
[2026-01-21 08:54:28] 2026-01-21 07:54:28,847 [wrapper] ==== wrapper stdout END ====
[2026-01-21 08:54:28] 2026-01-21 07:54:28,850 [wrapper] ==== wrapper stderr END ====
[2026-01-21 08:54:28]  *** Error codes and diagnostics ***
[2026-01-21 08:54:28]     "exeErrorCode": 0,
[2026-01-21 08:54:28]     "exeErrorDiag": "",
[2026-01-21 08:54:28]     "pilotErrorCode": 0,
[2026-01-21 08:54:28]     "pilotErrorDiag": "",
[2026-01-21 08:54:28]  *** Listing of results directory ***
[2026-01-21 08:54:28] total 431036
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc    584422 Jan 20 22:34 pilot3.tar.gz
[2026-01-21 08:54:28] -rwx------ 1 boinc boinc     36322 Jan 20 22:36 runpilot2-wrapper.sh
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc      5111 Jan 20 22:37 queuedata.json
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc       100 Jan 21 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 08:54:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 21 07:26 run_atlas
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc       105 Jan 21 07:26 job.xml
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc 261293329 Jan 21 07:26 EVNT.48299515._000038.pool.root.1
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc      6679 Jan 21 07:26 init_data.xml
[2026-01-21 08:54:28] drwxrwx--x 2 boinc boinc      4096 Jan 21 07:26 shared
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc    597771 Jan 21 07:26 input.tar.gz
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc     15845 Jan 21 07:26 start_atlas.sh
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc         0 Jan 21 07:26 boinc_lockfile
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc      2589 Jan 21 07:26 pandaJob.out
[2026-01-21 08:54:28] -rw------- 1 boinc boinc   1000361 Jan 21 07:27 agis_schedconf.cvmfs.json
[2026-01-21 08:54:28] -rw------- 1 boinc boinc   1516246 Jan 21 07:27 agis_ddmendpoints.agis.ALL.json
[2026-01-21 08:54:28] -rw------- 1 boinc boinc       421 Jan 21 07:27 workernode_map.json
[2026-01-21 08:54:28] drwx------ 5 boinc boinc      4096 Jan 21 07:27 pilot3
[2026-01-21 08:54:28] -rw------- 1 boinc boinc 174112997 Jan 21 08:53 HITS.48299517._000945.pool.root.1
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc       529 Jan 21 08:53 boinc_task_state.xml
[2026-01-21 08:54:28] -rw------- 1 boinc boinc        95 Jan 21 08:53 pilot_heartbeat.json
[2026-01-21 08:54:28] -rw------- 1 boinc boinc      1017 Jan 21 08:53 memory_monitor_summary.json
[2026-01-21 08:54:28] -rw------- 1 boinc boinc    258308 Jan 21 08:53 log.48299517._000945.job.log.tgz.1
[2026-01-21 08:54:28] -rw------- 1 boinc boinc      6303 Jan 21 08:53 heartbeat.json
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc      8192 Jan 21 08:54 boinc_mmap_file
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc        27 Jan 21 08:54 wrapper_checkpoint.txt
[2026-01-21 08:54:28] -rw------- 1 boinc boinc      4819 Jan 21 08:54 pilotlog.txt
[2026-01-21 08:54:28] -rw------- 1 boinc boinc    756840 Jan 21 08:54 log.48299517._000945.job.log.1
[2026-01-21 08:54:28] -rw------- 1 boinc boinc       357 Jan 21 08:54 output.list
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc       620 Jan 21 08:54 runtime_log
[2026-01-21 08:54:28] -rw------- 1 boinc boinc   1034240 Jan 21 08:54 result.tar.gz
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc      8911 Jan 21 08:54 runtime_log.err
[2026-01-21 08:54:28] -rw------- 1 boinc boinc       660 Jan 21 08:54 WsdLDmXZY28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNOqKDmJUSzfn.diag
[2026-01-21 08:54:28] -rw-r--r-- 1 boinc boinc     21066 Jan 21 08:54 stderr.txt
[2026-01-21 08:54:28] HITS file was successfully produced:
[2026-01-21 08:54:28] -rw------- 1 boinc boinc 174112997 Jan 21 08:53 shared/HITS.pool.root.1
[2026-01-21 08:54:28]  *** Contents of shared directory: ***
[2026-01-21 08:54:28] total 426828
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc 261293329 Jan 21 07:26 ATLAS.root_0
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc    597771 Jan 21 07:26 input.tar.gz
[2026-01-21 08:54:28] -rw-r--r-- 2 boinc boinc     15845 Jan 21 07:26 start_atlas.sh
[2026-01-21 08:54:28] -rw------- 1 boinc boinc 174112997 Jan 21 08:53 HITS.pool.root.1
[2026-01-21 08:54:28] -rw------- 1 boinc boinc   1034240 Jan 21 08:54 result.tar.gz
08:54:30 (123174): run_atlas exited; CPU time 14859.776183
08:54:30 (123174): called boinc_finish(0)

</stderr_txt>
]]>

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