Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:17 (4031676): wrapper (7.7.26015): starting
00:24:17 (4031676): wrapper: running run_atlas (--nthreads 3)
[2026-01-21 00:24:17] Arguments: --nthreads 3
[2026-01-21 00:24:17] Threads: 3
[2026-01-21 00:24:17] Checking for CVMFS
[2026-01-21 00:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 00:24:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 00:24:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 00:24:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 00:24:20] 2.9.2.0 4031871 0 30052 155364 4 1 24030190 36864001 0 130560 0 0 0.000 1335 1394 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-21 00:24:20] CVMFS is ok
[2026-01-21 00:24:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-21 00:24:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-21 00:24:20] Further information can be found at the LHC@home message board.
[2026-01-21 00:24:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 00:24:20] Checking for apptainer binary...
[2026-01-21 00:24:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 00:24:20] Running /usr/bin/apptainer --version
[2026-01-21 00:24:20] apptainer version 1.4.1-1.1
[2026-01-21 00:24:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 00:24:20] magicA161a
[2026-01-21 00:24:20] apptainer works
[2026-01-21 00:24:20] Set ATHENA_PROC_NUMBER=3
[2026-01-21 00:24:20] Set ATHENA_CORE_NUMBER=3
[2026-01-21 00:24:20] Starting ATLAS job with PandaID=6976882416
[2026-01-21 00:24:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 01:36:43]  *** The last 200 lines of the pilot log: ***
[2026-01-21 01:36:43] 2026-01-21 00:35:49,159 | INFO     | all job control threads have been joined
[2026-01-21 01:36:43] 2026-01-21 00:35:49,412 | INFO     | all payload control threads have been joined
[2026-01-21 01:36:43] 2026-01-21 00:35:49,825 | INFO     | all data control threads have been joined
[2026-01-21 01:36:43] 2026-01-21 00:35:49,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 01:36:43] 2026-01-21 00:35:49,942 | INFO     | [job] retrieve thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:49,942 | INFO     | [job] job monitor thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:49,942 | INFO     | [job] queue monitor thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:49,962 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,022 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,099 | INFO     | [payload] failed_post thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,131 | INFO     | [data] copytool_in thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,165 | INFO     | [job] control thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,418 | INFO     | [payload] control thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,593 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,821 | INFO     | [payload] validate_post thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:50,831 | INFO     | [data] control thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:51,369 | INFO     | [job] validate thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:51,910 | INFO     | [data] copytool_out thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:52,774 | INFO     | job.realtimelogging is not enabled
[2026-01-21 01:36:43] 2026-01-21 00:35:52,944 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:35:53,779 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 01:36:43] 2026-01-21 00:36:19,102 | INFO     | PID=4035947 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-21 01:36:43] 2026-01-21 00:36:19,102 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 01:36:43] 2026-01-21 00:36:19,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 01:36:43] 2026-01-21 00:36:19,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 01:36:43] 2026-01-21 00:36:36,513 | INFO     | [monitor] cgroup control has ended
[2026-01-21 01:36:43] 2026-01-21 00:36:38,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925334198080)>', '<ExcThread(monitor, started 139924841940736)>']
[2026-01-21 01:36:43] 2026-01-21 00:36:39,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 01:36:43] 2026-01-21 00:36:39,202 | INFO     | [monitor] control thread has ended
[2026-01-21 01:36:43] 2026-01-21 00:36:43,229 | INFO     | all workflow threads have been joined
[2026-01-21 01:36:43] 2026-01-21 00:36:43,230 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 01:36:43] 2026-01-21 00:36:43,230 | INFO     | traces error code: 0
[2026-01-21 01:36:43] 2026-01-21 00:36:43,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 01:36:43] 2026-01-21 00:36:43,281 [wrapper] ==== pilot stdout END ====
[2026-01-21 01:36:43] 2026-01-21 00:36:43,283 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 01:36:43] 2026-01-21 00:36:43,285 [wrapper] pilotpid: 4035947
[2026-01-21 01:36:43] 2026-01-21 00:36:43,288 [wrapper] Pilot exit status: 0
[2026-01-21 01:36:43] 2026-01-21 00:36:43,295 [wrapper] pandaids: 6976882416
[2026-01-21 01:36:43] 2026-01-21 00:36:43,310 [wrapper] cleanup supervisor_pilot 4045296 4035948
[2026-01-21 01:36:43] 2026-01-21 00:36:43,313 [wrapper] Test setup, not cleaning
[2026-01-21 01:36:43] 2026-01-21 00:36:43,315 [wrapper] apfmon messages muted
[2026-01-21 01:36:43] 2026-01-21 00:36:43,318 [wrapper] ==== wrapper stdout END ====
[2026-01-21 01:36:43] 2026-01-21 00:36:43,320 [wrapper] ==== wrapper stderr END ====
[2026-01-21 01:36:43]  *** Error codes and diagnostics ***
[2026-01-21 01:36:43]     "exeErrorCode": 0,
[2026-01-21 01:36:43]     "exeErrorDiag": "",
[2026-01-21 01:36:43]     "pilotErrorCode": 0,
[2026-01-21 01:36:43]     "pilotErrorDiag": "",
[2026-01-21 01:36:43]  *** Listing of results directory ***
[2026-01-21 01:36:43] total 428860
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc    584422 Jan 20 21:27 pilot3.tar.gz
[2026-01-21 01:36:43] -rwx------ 1 boinc boinc     36322 Jan 20 21:29 runpilot2-wrapper.sh
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      5111 Jan 20 21:30 queuedata.json
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc       100 Jan 21 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 01:36:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 21 00:24 run_atlas
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc       105 Jan 21 00:24 job.xml
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc 264677781 Jan 21 00:24 EVNT.48299635._000025.pool.root.1
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc    597770 Jan 21 00:24 input.tar.gz
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc     15845 Jan 21 00:24 start_atlas.sh
[2026-01-21 01:36:43] drwxrwx--x 2 boinc boinc      4096 Jan 21 00:24 shared
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc         0 Jan 21 00:24 boinc_setup_complete
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      6448 Jan 21 00:24 init_data.xml
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc         0 Jan 21 00:24 boinc_lockfile
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      2627 Jan 21 00:24 pandaJob.out
[2026-01-21 01:36:43] -rw------- 1 boinc boinc   1003861 Jan 21 00:24 agis_schedconf.cvmfs.json
[2026-01-21 01:36:43] -rw------- 1 boinc boinc   1516246 Jan 21 00:24 agis_ddmendpoints.agis.ALL.json
[2026-01-21 01:36:43] -rw------- 1 boinc boinc       426 Jan 21 00:24 workernode_map.json
[2026-01-21 01:36:43] drwx------ 5 boinc boinc      4096 Jan 21 00:24 pilot3
[2026-01-21 01:36:43] -rw------- 1 boinc boinc 168787976 Jan 21 01:35 HITS.48299637._000615.pool.root.1
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc       529 Jan 21 01:35 boinc_task_state.xml
[2026-01-21 01:36:43] -rw------- 1 boinc boinc      1010 Jan 21 01:35 memory_monitor_summary.json
[2026-01-21 01:36:43] -rw------- 1 boinc boinc    246314 Jan 21 01:35 log.48299637._000615.job.log.tgz.1
[2026-01-21 01:36:43] -rw------- 1 boinc boinc      6294 Jan 21 01:35 heartbeat.json
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      8192 Jan 21 01:36 boinc_mmap_file
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc        27 Jan 21 01:36 wrapper_checkpoint.txt
[2026-01-21 01:36:43] -rw------- 1 boinc boinc        95 Jan 21 01:36 pilot_heartbeat.json
[2026-01-21 01:36:43] -rw------- 1 boinc boinc      4820 Jan 21 01:36 pilotlog.txt
[2026-01-21 01:36:43] -rw------- 1 boinc boinc    634486 Jan 21 01:36 log.48299637._000615.job.log.1
[2026-01-21 01:36:43] -rw------- 1 boinc boinc       357 Jan 21 01:36 output.list
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc       620 Jan 21 01:36 runtime_log
[2026-01-21 01:36:43] -rw------- 1 boinc boinc    901120 Jan 21 01:36 result.tar.gz
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      8916 Jan 21 01:36 runtime_log.err
[2026-01-21 01:36:43] -rw------- 1 boinc boinc       661 Jan 21 01:36 6FNKDm9WX28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBGqKDmAin5hm.diag
[2026-01-21 01:36:43] -rw-r--r-- 1 boinc boinc      6818 Jan 21 01:36 stderr.txt
[2026-01-21 01:36:43] HITS file was successfully produced:
[2026-01-21 01:36:43] -rw------- 1 boinc boinc 168787976 Jan 21 01:35 shared/HITS.pool.root.1
[2026-01-21 01:36:43]  *** Contents of shared directory: ***
[2026-01-21 01:36:43] total 424796
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc 264677781 Jan 21 00:24 ATLAS.root_0
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc    597770 Jan 21 00:24 input.tar.gz
[2026-01-21 01:36:43] -rw-r--r-- 2 boinc boinc     15845 Jan 21 00:24 start_atlas.sh
[2026-01-21 01:36:43] -rw------- 1 boinc boinc 168787976 Jan 21 01:35 HITS.pool.root.1
[2026-01-21 01:36:43] -rw------- 1 boinc boinc    901120 Jan 21 01:36 result.tar.gz
01:36:45 (4031676): run_atlas exited; CPU time 12218.838396
01:36:45 (4031676): called boinc_finish(0)

</stderr_txt>
]]>

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