Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:25:39 (2491166): wrapper (7.7.26015): starting
15:25:39 (2491166): wrapper: running run_atlas (--nthreads 8)
[2026-01-20 15:25:39] Arguments: --nthreads 8
[2026-01-20 15:25:39] Threads: 8
[2026-01-20 15:25:39] Checking for CVMFS
[2026-01-20 15:25:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 15:25:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 15:25:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 15:25:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 15:25:40] 2.11.3.0 1215219 108241 185672 155364 3 195 23199421 45568000 15894 130560 0 590550039 99.801 357402134 21065 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-20 15:25:40] CVMFS is ok
[2026-01-20 15:25:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-20 15:25:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-20 15:25:40] Further information can be found at the LHC@home message board.
[2026-01-20 15:25:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 15:25:40] Checking for apptainer binary...
[2026-01-20 15:25:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-20 15:25:40] Running /usr/bin/apptainer --version
[2026-01-20 15:25:40] apptainer version 1.4.1-1.el9
[2026-01-20 15:25:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 15:25:41] wns0018.triumf.lcg
[2026-01-20 15:25:41] apptainer works
[2026-01-20 15:25:41] Set ATHENA_PROC_NUMBER=8
[2026-01-20 15:25:41] Set ATHENA_CORE_NUMBER=8
[2026-01-20 15:25:41] Starting ATLAS job with PandaID=6976882074
[2026-01-20 15:25:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-20 15:32:24]  *** The last 200 lines of the pilot log: ***
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | wrong length of table data, x=[1768951704.0, 1768951765.0], y=[2299.0, 467838.0] (must be same and length>=4)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . Timing measurements:
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . get job = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . initial setup = 43 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload setup = 31 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-in = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload execution = 90 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-out = 1 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . log creation = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-20 15:32:24] 2026-01-20 23:31:38,629 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976882074/pilotlog.txt
[2026-01-20 15:32:24] 2026-01-20 23:31:38,642 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-20 15:32:24] - Log from pilotlog.txt -
[2026-01-20 15:32:24] 2026-01-20 23:31:38,625 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6976882074/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | INFO     | extracted standard info from prmon json
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | INFO     | extracted standard memory fields from prmon json
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | wrong length of table data, x=[1768951704.0, 1768951765.0], y=[2299.0, 467838.0] (must be same and length>=4)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . Timing measurements:
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . get job = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . initial setup = 43 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload setup = 31 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-in = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload execution = 90 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-out = 1 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . log creation = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-20 15:32:24] 2026-01-20 23:31:38,629 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976882074/pilotlog.txt
[2026-01-20 15:32:24] 2026-01-20 23:31:38,643 | WARNING  | 
[2026-01-20 15:32:24] [begin log extracts]
[2026-01-20 15:32:24] - Log from pilotlog.txt -
[2026-01-20 15:32:24] 2026-01-20 23:31:38,625 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6976882074/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | INFO     | extracted standard info from prmon json
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | INFO     | extracted standard memory fields from prmon json
[2026-01-20 15:32:24] 2026-01-20 23:31:38,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | WARNING  | wrong length of table data, x=[1768951704.0, 1768951765.0], y=[2299.0, 467838.0] (must be same and length>=4)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,627 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . Timing measurements:
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . get job = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . initial setup = 43 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload setup = 31 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-in = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . payload execution = 90 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . stage-out = 1 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | . log creation = 0 s
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | ..............................
[2026-01-20 15:32:24] 2026-01-20 23:31:38,628 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-20 15:32:24] 2026-01-20 23:31:38,629 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6976882074/pilotlog.txt
[2026-01-20 15:32:24] [end log extracts]
[2026-01-20 15:32:24] 2026-01-20 23:31:38,643 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-20 15:32:24] 2026-01-20 23:31:38,644 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-20 15:32:24] 2026-01-20 23:31:38,985 | INFO     | time since job start (260s) is within the limit (349056.0s)
[2026-01-20 15:32:24] 2026-01-20 23:31:39,155 | INFO     | 
[2026-01-20 15:32:24] 2026-01-20 23:31:39,155 | INFO     | job summary report
[2026-01-20 15:32:24] 2026-01-20 23:31:39,155 | INFO     | --------------------------------------------------
[2026-01-20 15:32:24] 2026-01-20 23:31:39,155 | INFO     | PanDA job id: 6976882074
[2026-01-20 15:32:24] 2026-01-20 23:31:39,155 | INFO     | task id: 48299637
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-20 15:29:23,650 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | pilot state: failed 
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | transexitcode: 65
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | exeerrorcode: 65
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | exitcode: 65
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | cpuconsumptiontime: 16 s
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | nevents: 0
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | neventsw: 0
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | pid: 2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | pgrp: 2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:39,156 | INFO     | corecount: 8
[2026-01-20 15:32:24] 2026-01-20 23:31:39,157 | INFO     | event service: False
[2026-01-20 15:32:24] 2026-01-20 23:31:39,157 | INFO     | sizes: {0: 2283890, 1: 2283946, 2: 2284002, 3: 2284463, 13: 2284463, 127: 2307882, 129: 2312230, 247: 2312368}
[2026-01-20 15:32:24] 2026-01-20 23:31:39,157 | INFO     | --------------------------------------------------
[2026-01-20 15:32:24] 2026-01-20 23:31:39,157 | INFO     | 
[2026-01-20 15:32:24] 2026-01-20 23:31:39,157 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-20 15:32:24] 2026-01-20 23:31:39,231 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,232 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,232 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,232 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-20 15:32:24] 2026-01-20 23:31:39,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-20 15:32:24] 2026-01-20 23:31:39,243 | INFO     | job 6976882074 has completed (purged errors)
[2026-01-20 15:32:24] 2026-01-20 23:31:39,243 | INFO     | overall cleanup function is called
[2026-01-20 15:32:24] 2026-01-20 23:31:40,250 | INFO     | --- collectZombieJob: --- 10, [2499614]
[2026-01-20 15:32:24] 2026-01-20 23:31:40,250 | INFO     | zombie collector waiting for pid 2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:40,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-20 15:32:24] 2026-01-20 23:31:40,250 | INFO     | collected zombie processes
[2026-01-20 15:32:24] 2026-01-20 23:31:40,251 | INFO     | will attempt to kill all subprocesses of pid=2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:41,426 | INFO     | process IDs to be killed: [2499614] (in reverse order)
[2026-01-20 15:32:24] 2026-01-20 23:31:41,589 | WARNING  | found no corresponding commands to process id(s)
[2026-01-20 15:32:24] 2026-01-20 23:31:41,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-20 15:32:24] 2026-01-20 23:31:41,605 | INFO     | did not find any defunct processes belonging to 2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:41,624 | INFO     | did not find any defunct processes belonging to 2499614
[2026-01-20 15:32:24] 2026-01-20 23:31:41,625 | INFO     | ready for new job
[2026-01-20 15:32:24] 2026-01-20 23:31:41,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-20 15:32:24] 2026-01-20 23:31:41,626 | INFO     | **************************************
[2026-01-20 15:32:24] 2026-01-20 23:31:41,626 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-20 15:32:24] 2026-01-20 23:31:41,627 | INFO     | **************************************
[2026-01-20 15:32:24] 2026-01-20 23:31:41,627 | INFO     | 
[2026-01-20 15:32:24] 2026-01-20 23:31:41,637 | INFO     | architecture information:
[2026-01-20 15:32:24] 2026-01-20 23:31:41,644 | INFO     | executing command: cat /etc/os-release
[2026-01-20 15:32:24] 2026-01-20 23:31:41,676 | INFO     | cat /etc/os-release:
[2026-01-20 15:32:24] NAME="CentOS Linux"
[2026-01-20 15:32:24] VERSION="7 (Core)"
[2026-01-20 15:32:24] ID="centos"
[2026-01-20 15:32:24] ID_LIKE="rhel fedora"
[2026-01-20 15:32:24] VERSION_ID="7"
[2026-01-20 15:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-20 15:32:24] ANSI_COLOR="0;31"
[2026-01-20 15:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-20 15:32:24] HOME_URL="https://www.centos.org/"
[2026-01-20 15:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-20 15:32:24] 
[2026-01-20 15:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-20 15:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-20 15:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-20 15:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-20 15:32:24] 
[2026-01-20 15:32:24] 2026-01-20 23:31:41,676 | INFO     | **************************************
[2026-01-20 15:32:24] 2026-01-20 23:31:42,180 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-20 15:32:24] 2026-01-20 23:31:42,315 | INFO     | sufficient remaining disk space (1258053173248 B)
[2026-01-20 15:32:24] 2026-01-20 23:31:42,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-20 15:32:24] 2026-01-20 23:31:42,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-20 15:32:24] 2026-01-20 23:31:42,316 | INFO     | update_server=False
[2026-01-20 15:32:24] 2026-01-20 23:31:42,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-20 15:32:24] 2026-01-20 23:31:42,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-20 15:32:24] 2026-01-20 23:31:42,660 | INFO     | all data control threads have been joined
[2026-01-20 15:32:24] 2026-01-20 23:31:42,703 | INFO     | all payload control threads have been joined
[2026-01-20 15:32:24] 2026-01-20 23:31:42,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-20 15:32:24] 2026-01-20 23:31:42,963 | INFO     | aborting loop
[2026-01-20 15:32:24] 2026-01-20 23:31:43,322 | INFO     | [job] retrieve thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,569 | INFO     | all job control threads have been joined
[2026-01-20 15:32:24] 2026-01-20 23:31:43,666 | INFO     | [data] control thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,681 | INFO     | [job] create_data_payload thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,709 | INFO     | [payload] control thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,713 | INFO     | [payload] execute_payloads thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,956 | INFO     | [payload] validate_pre thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,976 | INFO     | [job] job monitor thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:43,977 | INFO     | [data] copytool_in thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,057 | INFO     | [payload] failed_post thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-20 15:32:24] 2026-01-20 23:31:44,324 | INFO     | [data] copytool_out thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,399 | INFO     | [payload] validate_post thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,575 | INFO     | [job] control thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,682 | INFO     | [job] validate thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:44,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-20 15:32:24] 2026-01-20 23:31:45,227 | INFO     | [job] queue monitor thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:31:48,963 | INFO     | [data] queue_monitor thread has finished
[2026-01-20 15:32:24] 2026-01-20 23:32:12,407 | INFO     | PID=2494906 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-20 15:32:24] 2026-01-20 23:32:12,407 | INFO     | .. there are 19 such processes running
[2026-01-20 15:32:24] 2026-01-20 23:32:12,408 | INFO     | found 0 job(s) in 20 queues
[2026-01-20 15:32:24] 2026-01-20 23:32:12,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-20 15:32:24] 2026-01-20 23:32:12,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-20 15:32:24] 2026-01-20 23:32:17,737 | INFO     | [monitor] cgroup control has ended
[2026-01-20 15:32:24] 2026-01-20 23:32:18,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889351841600)>', '<ExcThread(monitor, started 139888653477632)>']
[2026-01-20 15:32:24] 2026-01-20 23:32:18,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-20 15:32:24] 2026-01-20 23:32:18,450 | INFO     | [monitor] control thread has ended
[2026-01-20 15:32:24] 2026-01-20 23:32:23,465 | INFO     | all workflow threads have been joined
[2026-01-20 15:32:24] 2026-01-20 23:32:23,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-20 15:32:24] 2026-01-20 23:32:23,465 | INFO     | traces error code: 0
[2026-01-20 15:32:24] 2026-01-20 23:32:23,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-20 15:32:24] 2026-01-20 23:32:23,775 [wrapper] ==== pilot stdout END ====
[2026-01-20 15:32:24] 2026-01-20 23:32:23,803 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-20 15:32:24] 2026-01-20 23:32:23,822 [wrapper] pilotpid: 2494906
[2026-01-20 15:32:24] 2026-01-20 23:32:23,832 [wrapper] Pilot exit status: 0
[2026-01-20 15:32:24] 2026-01-20 23:32:23,908 [wrapper] pandaids: 6976882074
[2026-01-20 15:32:24] 2026-01-20 23:32:24,093 [wrapper] cleanup supervisor_pilot 2494912 2494907
[2026-01-20 15:32:24] 2026-01-20 23:32:24,095 [wrapper] Test setup, not cleaning
[2026-01-20 15:32:24] 2026-01-20 23:32:24,098 [wrapper] apfmon messages muted
[2026-01-20 15:32:24] 2026-01-20 23:32:24,100 [wrapper] ==== wrapper stdout END ====
[2026-01-20 15:32:24] 2026-01-20 23:32:24,101 [wrapper] ==== wrapper stderr END ====
[2026-01-20 15:32:24]  *** Error codes and diagnostics ***
[2026-01-20 15:32:24]     "exeErrorCode": 65,
[2026-01-20 15:32:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-20 15:32:24]     "pilotErrorCode": 1305,
[2026-01-20 15:32:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-20 15:32:24]  *** Listing of results directory ***
[2026-01-20 15:32:24] total 258976
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc    584422 Jan 20 12:27 pilot3.tar.gz
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc      5111 Jan 20 12:27 queuedata.json
[2026-01-20 15:32:24] -rwx------. 1 boinc boinc     36322 Jan 20 12:27 runpilot2-wrapper.sh
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc       100 Jan 20 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-20 15:32:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 20 15:25 run_atlas
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc       105 Jan 20 15:25 job.xml
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc      6445 Jan 20 15:25 init_data.xml
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc 261023767 Jan 20 15:25 EVNT.48299635._000013.pool.root.1
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc     15845 Jan 20 15:25 start_atlas.sh
[2026-01-20 15:32:24] drwxrwx--x. 2 boinc boinc      4096 Jan 20 15:25 shared
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc    597776 Jan 20 15:25 input.tar.gz
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc         0 Jan 20 15:25 boinc_lockfile
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc      2627 Jan 20 15:25 pandaJob.out
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc   1003861 Jan 20 15:26 agis_schedconf.cvmfs.json
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc   1516246 Jan 20 15:26 agis_ddmendpoints.agis.ALL.json
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc       442 Jan 20 15:27 workernode_map.json
[2026-01-20 15:32:24] drwx------. 5 boinc boinc      4096 Jan 20 15:27 pilot3
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc       524 Jan 20 15:29 boinc_task_state.xml
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc       983 Jan 20 15:29 memory_monitor_summary.json
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc     22737 Jan 20 15:29 log.48299637._000318.job.log.tgz.1
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc        95 Jan 20 15:31 pilot_heartbeat.json
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc      7041 Jan 20 15:31 heartbeat.json
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc      8192 Jan 20 15:32 boinc_mmap_file
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc        23 Jan 20 15:32 wrapper_checkpoint.txt
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc      4819 Jan 20 15:32 pilotlog.txt
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc     91776 Jan 20 15:32 log.48299637._000318.job.log.1
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc       188 Jan 20 15:32 output.list
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc       620 Jan 20 15:32 runtime_log
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc    133120 Jan 20 15:32 result.tar.gz
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc       643 Jan 20 15:32 szRMDmXVX28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpjwKDmVbVCkm.diag
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc      8633 Jan 20 15:32 runtime_log.err
[2026-01-20 15:32:24] -rw-r--r--. 1 boinc boinc     21879 Jan 20 15:32 stderr.txt
[2026-01-20 15:32:24] No HITS result produced
[2026-01-20 15:32:24]  *** Contents of shared directory: ***
[2026-01-20 15:32:24] total 255644
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc 261023767 Jan 20 15:25 ATLAS.root_0
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc     15845 Jan 20 15:25 start_atlas.sh
[2026-01-20 15:32:24] -rw-r--r--. 2 boinc boinc    597776 Jan 20 15:25 input.tar.gz
[2026-01-20 15:32:24] -rw-------. 1 boinc boinc    133120 Jan 20 15:32 result.tar.gz
15:32:26 (2491166): run_atlas exited; CPU time 25.270453
15:32:26 (2491166): called boinc_finish(0)

</stderr_txt>
]]>

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