Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:59:04 (3341759): wrapper (7.7.26015): starting
23:59:04 (3341759): wrapper: running run_atlas (--nthreads 4)
[2026-01-20 23:59:04] Arguments: --nthreads 4
[2026-01-20 23:59:04] Threads: 4
[2026-01-20 23:59:04] Checking for CVMFS
[2026-01-20 23:59:04] No cvmfs_config command found, will try listing directly
[2026-01-20 23:59:04] CVMFS is ok
[2026-01-20 23:59:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-20 23:59:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-20 23:59:04] Further information can be found at the LHC@home message board.
[2026-01-20 23:59:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 23:59:04] Checking for apptainer binary...
[2026-01-20 23:59:04] which: no apptainer in ((null))
[2026-01-20 23:59:04] apptainer is not installed, using version from CVMFS
[2026-01-20 23:59:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 23:59:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-20 23:59:05] apptainer works
[2026-01-20 23:59:05] Set ATHENA_PROC_NUMBER=4
[2026-01-20 23:59:05] Set ATHENA_CORE_NUMBER=4
[2026-01-20 23:59:05] Starting ATLAS job with PandaID=6976764446
[2026-01-20 23:59:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 02:47:19]  *** The last 200 lines of the pilot log: ***
[2026-01-21 02:47:19] 2026-01-21 01:43:01,757 | INFO     | mean y: 2320795.118012422
[2026-01-21 02:47:19] 2026-01-21 01:43:01,757 | INFO     | intersect: -8762171843.027834
[2026-01-21 02:47:19] 2026-01-21 01:43:01,757 | INFO     | chi2: 2.039196531052458
[2026-01-21 02:47:19] 2026-01-21 01:43:01,757 | INFO     | sum of square deviations: 1177156955.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,758 | INFO     | sum of deviations: 15912376490.999998
[2026-01-21 02:47:19] 2026-01-21 01:43:01,758 | INFO     | mean x: 1768954722.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,758 | INFO     | mean y: 2332866.717948718
[2026-01-21 02:47:19] 2026-01-21 01:43:01,758 | INFO     | intersect: -23909749052.68287
[2026-01-21 02:47:19] 2026-01-21 01:43:01,759 | INFO     | chi2: 1.2713074498610357
[2026-01-21 02:47:19] 2026-01-21 01:43:01,759 | INFO     | current chi2=1.2713074498610357 (change=37.656452896921316 %)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,759 | INFO     | sum of square deviations: 1067554900.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,760 | INFO     | sum of deviations: 15329505814.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,760 | INFO     | mean x: 1768954570.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,760 | INFO     | mean y: 2332055.437086093
[2026-01-21 02:47:19] 2026-01-21 01:43:01,760 | INFO     | intersect: -25398890275.626984
[2026-01-21 02:47:19] 2026-01-21 01:43:01,760 | INFO     | chi2: 1.272518303484978
[2026-01-21 02:47:19] 2026-01-21 01:43:01,761 | INFO     | current chi2=1.272518303484978 (change=-0.09524475169831736 %)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,761 | INFO     | right removable region: 150
[2026-01-21 02:47:19] 2026-01-21 01:43:01,761 | INFO     | sum of square deviations: 1177156955.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,762 | INFO     | sum of deviations: -11558086294.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,762 | INFO     | mean x: 1768955027.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,762 | INFO     | mean y: 2343799.3012820515
[2026-01-21 02:47:19] 2026-01-21 01:43:01,762 | INFO     | intersect: 17371085301.520603
[2026-01-21 02:47:19] 2026-01-21 01:43:01,762 | INFO     | chi2: 0.8105065447573488
[2026-01-21 02:47:19] 2026-01-21 01:43:01,763 | INFO     | current chi2=0.8105065447573488 (change=60.253632623676786 %)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,763 | INFO     | sum of square deviations: 1067554900.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | sum of deviations: -8766122608.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | mean x: 1768955180.0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | mean y: 2339882.086092715
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | intersect: 14527942261.820107
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | chi2: 0.7986520741633113
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | current chi2=0.7986520741633113 (change=1.462600230771309 %)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,764 | INFO     | left removable region: 20
[2026-01-21 02:47:19] 2026-01-21 01:43:01,765 | INFO     | sum of square deviations: 681212772.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,765 | INFO     | sum of deviations: 266970739.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,765 | INFO     | mean x: 1768955149.5
[2026-01-21 02:47:19] 2026-01-21 01:43:01,766 | INFO     | mean y: 2353840.8076923075
[2026-01-21 02:47:19] 2026-01-21 01:43:01,766 | INFO     | intersect: -690908651.4253758
[2026-01-21 02:47:19] 2026-01-21 01:43:01,766 | INFO     | chi2: 0.0006141965278440092
[2026-01-21 02:47:19] 2026-01-21 01:43:01,766 | INFO     | current memory leak: 0.39 B/s (using 130 data points, chi2=0.00)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,766 | INFO     | could have reported an average CPU frequency of 2687 MHz (9 samples)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | ..............................
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . Timing measurements:
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . get job = 0 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . initial setup = 8 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . payload setup = 8 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . stage-in = 0 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . payload execution = 9787 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . stage-out = 0 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | . log creation = 0 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,767 | INFO     | ..............................
[2026-01-21 02:47:19] 2026-01-21 01:43:01,867 | INFO     | 
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | job summary report
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | --------------------------------------------------
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | PanDA job id: 6976764446
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | task id: 48299565
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | errors: (none)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | pilot state: finished 
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | transexitcode: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | exeerrorcode: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,868 | INFO     | exeerrordiag: 
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | exitcode: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | exitmsg: OK
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | cpuconsumptiontime: 37368 s
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | nevents: 400
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | neventsw: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | pid: 3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | pgrp: 3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | corecount: 4
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | event service: False
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | sizes: {0: 2284108, 1: 2284370, 11: 2284398, 9799: 2313428, 9800: 2322503, 9802: 2322503, 9803: 2322889}
[2026-01-21 02:47:19] 2026-01-21 01:43:01,869 | INFO     | --------------------------------------------------
[2026-01-21 02:47:19] 2026-01-21 01:43:01,870 | INFO     | 
[2026-01-21 02:47:19] 2026-01-21 01:43:01,870 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-21 02:47:19] 2026-01-21 01:43:01,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 02:47:19] 2026-01-21 01:43:01,904 | INFO     | job 6976764446 has completed (purged errors)
[2026-01-21 02:47:19] 2026-01-21 01:43:01,904 | INFO     | overall cleanup function is called
[2026-01-21 02:47:19] 2026-01-21 01:43:02,913 | INFO     | --- collectZombieJob: --- 10, [3351010]
[2026-01-21 02:47:19] 2026-01-21 01:43:02,914 | INFO     | zombie collector waiting for pid 3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:02,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 02:47:19] 2026-01-21 01:43:02,914 | INFO     | collected zombie processes
[2026-01-21 02:47:19] 2026-01-21 01:43:02,914 | INFO     | will attempt to kill all subprocesses of pid=3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:03,716 | INFO     | process IDs to be killed: [3351010] (in reverse order)
[2026-01-21 02:47:19] 2026-01-21 01:43:03,987 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 02:47:19] 2026-01-21 01:43:03,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 02:47:19] 2026-01-21 01:43:04,023 | INFO     | did not find any defunct processes belonging to 3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:04,057 | INFO     | did not find any defunct processes belonging to 3351010
[2026-01-21 02:47:19] 2026-01-21 01:43:04,057 | INFO     | ready for new job
[2026-01-21 02:47:19] 2026-01-21 01:43:04,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 02:47:19] 2026-01-21 01:43:04,060 | INFO     | **************************************
[2026-01-21 02:47:19] 2026-01-21 01:43:04,060 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 02:47:19] 2026-01-21 01:43:04,060 | INFO     | **************************************
[2026-01-21 02:47:19] 2026-01-21 01:43:04,060 | INFO     | 
[2026-01-21 02:47:19] 2026-01-21 01:43:04,069 | INFO     | architecture information:
[2026-01-21 02:47:19] 2026-01-21 01:43:04,069 | INFO     | executing command: cat /etc/os-release
[2026-01-21 02:47:19] 2026-01-21 01:43:04,091 | INFO     | cat /etc/os-release:
[2026-01-21 02:47:19] NAME="CentOS Linux"
[2026-01-21 02:47:19] VERSION="7 (Core)"
[2026-01-21 02:47:19] ID="centos"
[2026-01-21 02:47:19] ID_LIKE="rhel fedora"
[2026-01-21 02:47:19] VERSION_ID="7"
[2026-01-21 02:47:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 02:47:19] ANSI_COLOR="0;31"
[2026-01-21 02:47:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 02:47:19] HOME_URL="https://www.centos.org/"
[2026-01-21 02:47:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 02:47:19] 
[2026-01-21 02:47:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 02:47:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 02:47:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 02:47:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 02:47:19] 
[2026-01-21 02:47:19] 2026-01-21 01:43:04,091 | INFO     | **************************************
[2026-01-21 02:47:19] 2026-01-21 01:43:04,594 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-21 02:47:19] 2026-01-21 01:43:04,614 | INFO     | sufficient remaining disk space (3303362527232 B)
[2026-01-21 02:47:19] 2026-01-21 01:43:04,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 02:47:19] 2026-01-21 01:43:04,615 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 02:47:19] 2026-01-21 01:43:04,615 | INFO     | update_server=False
[2026-01-21 02:47:19] 2026-01-21 01:43:04,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 02:47:19] 2026-01-21 01:43:04,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 02:47:19] 2026-01-21 01:43:05,102 | INFO     | all payload control threads have been joined
[2026-01-21 02:47:19] 2026-01-21 01:43:05,406 | WARNING  | process 3351010 can no longer be monitored (due to stat problems) - aborting
[2026-01-21 02:47:19] 2026-01-21 01:43:05,411 | INFO     | all job control threads have been joined
[2026-01-21 02:47:19] 2026-01-21 01:43:05,545 | INFO     | all data control threads have been joined
[2026-01-21 02:47:19] 2026-01-21 01:43:05,621 | INFO     | [job] retrieve thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:05,729 | INFO     | [payload] validate_post thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:05,908 | INFO     | [data] copytool_in thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,042 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 02:47:19] 2026-01-21 01:43:06,043 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 02:47:19] 2026-01-21 01:43:06,043 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-21 02:47:19] 2026-01-21 01:43:06,044 | WARNING  | maxPSS not found in memory monitor output
[2026-01-21 02:47:19] 2026-01-21 01:43:06,044 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6976764446/payload.stdout) since it has not been created yet
[2026-01-21 02:47:19] 2026-01-21 01:43:06,044 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-21 02:47:19] 2026-01-21 01:43:06,067 | INFO     | sufficient remaining disk space (3303362527232 B)
[2026-01-21 02:47:19] 2026-01-21 01:43:06,068 | INFO     | [payload] failed_post thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,068 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-21 02:47:19] 2026-01-21 01:43:06,069 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6976764446/HITS.48299565._000115.pool.root.1 since it does not exist
[2026-01-21 02:47:19] 2026-01-21 01:43:06,107 | INFO     | [payload] control thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,368 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 02:47:19] 2026-01-21 01:43:06,417 | INFO     | [job] control thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,445 | INFO     | [job] validate thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,551 | INFO     | [data] control thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,718 | INFO     | [data] copytool_out thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,720 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,733 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:06,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 02:47:19] 2026-01-21 01:43:06,882 | INFO     | number of running child processes to parent process 3351010: 1
[2026-01-21 02:47:19] 2026-01-21 01:43:06,882 | INFO     | maximum number of monitored processes: 6
[2026-01-21 02:47:19] 2026-01-21 01:43:06,882 | INFO     | aborting job monitoring since job object (job id=6976764446) has expired
[2026-01-21 02:47:19] 2026-01-21 01:43:06,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 02:47:19] 2026-01-21 01:43:06,882 | INFO     | will abort loop
[2026-01-21 02:47:19] 2026-01-21 01:43:07,882 | INFO     | [job] queue monitor thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:07,887 | INFO     | [job] job monitor thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:10,372 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:15,282 | INFO     | job.realtimelogging is not enabled
[2026-01-21 02:47:19] 2026-01-21 01:43:16,287 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 02:47:19] 2026-01-21 01:43:35,333 | INFO     | PID=3345998 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-21 02:47:19] 2026-01-21 01:43:35,334 | INFO     | .. there are 8 such processes running
[2026-01-21 02:47:19] 2026-01-21 01:43:35,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 02:47:19] 2026-01-21 01:43:35,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 02:47:19] 2026-01-21 01:43:35,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 02:47:19] 2026-01-21 01:43:42,881 | INFO     | [monitor] cgroup control has ended
[2026-01-21 02:47:19] 2026-01-21 01:43:43,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22414635575104)>', '<ExcThread(monitor, started 22414389147392)>']
[2026-01-21 02:47:19] 2026-01-21 01:43:43,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 02:47:19] 2026-01-21 01:43:43,374 | INFO     | [monitor] control thread has ended
[2026-01-21 02:47:19] 2026-01-21 01:43:48,223 | INFO     | all workflow threads have been joined
[2026-01-21 02:47:19] 2026-01-21 01:43:48,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 02:47:19] 2026-01-21 01:43:48,224 | INFO     | traces error code: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:48,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 02:47:19] 2026-01-21 01:43:48,369 [wrapper] ==== pilot stdout END ====
[2026-01-21 02:47:19] 2026-01-21 01:43:48,373 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 02:47:19] 2026-01-21 01:43:48,377 [wrapper] pilotpid: 3345998
[2026-01-21 02:47:19] 2026-01-21 01:43:48,381 [wrapper] Pilot exit status: 0
[2026-01-21 02:47:19] 2026-01-21 01:43:48,396 [wrapper] pandaids: 6976764446
[2026-01-21 02:47:19] 2026-01-21 01:43:48,569 [wrapper] cleanup supervisor_pilot 3474224 3345999
[2026-01-21 02:47:19] 2026-01-21 01:43:48,573 [wrapper] Test setup, not cleaning
[2026-01-21 02:47:19] 2026-01-21 01:43:48,578 [wrapper] apfmon messages muted
[2026-01-21 02:47:19] 2026-01-21 01:43:48,582 [wrapper] ==== wrapper stdout END ====
[2026-01-21 02:47:19] 2026-01-21 01:43:48,586 [wrapper] ==== wrapper stderr END ====
[2026-01-21 02:47:19]  *** Error codes and diagnostics ***
[2026-01-21 02:47:19]     "exeErrorCode": 0,
[2026-01-21 02:47:19]     "exeErrorDiag": "",
[2026-01-21 02:47:19]     "pilotErrorCode": 0,
[2026-01-21 02:47:19]     "pilotErrorDiag": "",
[2026-01-21 02:47:19]  *** Listing of results directory ***
[2026-01-21 02:47:19] total 430356
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc    584422 Jan 20 19:34 pilot3.tar.gz
[2026-01-21 02:47:19] -rwx------ 1 boinc boinc     36322 Jan 20 19:39 runpilot2-wrapper.sh
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc      5111 Jan 20 19:39 queuedata.json
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc       100 Jan 20 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 02:47:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 20 22:52 run_atlas
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc       105 Jan 20 22:52 job.xml
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc 257853712 Jan 20 23:59 EVNT.48299563._000005.pool.root.1
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc      6689 Jan 20 23:59 init_data.xml
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc    597775 Jan 20 23:59 input.tar.gz
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc     15845 Jan 20 23:59 start_atlas.sh
[2026-01-21 02:47:19] drwxrwx--x 2 boinc boinc      4096 Jan 20 23:59 shared
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc         0 Jan 20 23:59 boinc_lockfile
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc      2609 Jan 20 23:59 pandaJob.out
[2026-01-21 02:47:19] -rw------- 1 boinc boinc   1003869 Jan 20 23:59 agis_schedconf.cvmfs.json
[2026-01-21 02:47:19] -rw------- 1 boinc boinc   1516246 Jan 20 23:59 agis_ddmendpoints.agis.ALL.json
[2026-01-21 02:47:19] -rw------- 1 boinc boinc       443 Jan 20 23:59 workernode_map.json
[2026-01-21 02:47:19] drwx------ 5 boinc boinc      4096 Jan 20 23:59 pilot3
[2026-01-21 02:47:19] -rw------- 1 boinc boinc 175457264 Jan 21 02:42 HITS.48299565._000115.pool.root.1
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc       528 Jan 21 02:42 boinc_task_state.xml
[2026-01-21 02:47:19] -rw------- 1 boinc boinc        95 Jan 21 02:42 pilot_heartbeat.json
[2026-01-21 02:47:19] -rw------- 1 boinc boinc      1041 Jan 21 02:42 memory_monitor_summary.json
[2026-01-21 02:47:19] -rw------- 1 boinc boinc    339848 Jan 21 02:42 log.48299565._000115.job.log.tgz.1
[2026-01-21 02:47:19] -rw------- 1 boinc boinc      6342 Jan 21 02:43 heartbeat.json
[2026-01-21 02:47:19] -rw------- 1 boinc boinc      6445 Jan 21 02:43 pilotlog.txt
[2026-01-21 02:47:19] -rw------- 1 boinc boinc   1377576 Jan 21 02:43 log.48299565._000115.job.log.1
[2026-01-21 02:47:19] -rw------- 1 boinc boinc       357 Jan 21 02:43 output.list
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc       620 Jan 21 02:43 runtime_log
[2026-01-21 02:47:19] -rw------- 1 boinc boinc   1730560 Jan 21 02:43 result.tar.gz
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc      9204 Jan 21 02:43 runtime_log.err
[2026-01-21 02:47:19] -rw------- 1 boinc boinc       662 Jan 21 02:43 lhPLDmKoV28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYAwKDmDRZmMn.diag
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc        26 Jan 21 02:47 wrapper_checkpoint.txt
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc      8192 Jan 21 02:47 boinc_mmap_file
[2026-01-21 02:47:19] -rw-r--r-- 1 boinc boinc     21268 Jan 21 02:47 stderr.txt
[2026-01-21 02:47:19] HITS file was successfully produced:
[2026-01-21 02:47:19] -rw------- 1 boinc boinc 175457264 Jan 21 02:42 shared/HITS.pool.root.1
[2026-01-21 02:47:19]  *** Contents of shared directory: ***
[2026-01-21 02:47:19] total 425460
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc 257853712 Jan 20 23:59 ATLAS.root_0
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc    597775 Jan 20 23:59 input.tar.gz
[2026-01-21 02:47:19] -rw-r--r-- 2 boinc boinc     15845 Jan 20 23:59 start_atlas.sh
[2026-01-21 02:47:19] -rw------- 1 boinc boinc 175457264 Jan 21 02:42 HITS.pool.root.1
[2026-01-21 02:47:19] -rw------- 1 boinc boinc   1730560 Jan 21 02:43 result.tar.gz
02:47:20 (3341759): run_atlas exited; CPU time 38077.951253
02:47:20 (3341759): called boinc_finish(0)

</stderr_txt>
]]>

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