Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:52 (3501422): wrapper (7.7.26015): starting
18:35:52 (3501422): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 18:35:52] Arguments: --nthreads 4
[2026-01-23 18:35:52] Threads: 4
[2026-01-23 18:35:52] Checking for CVMFS
[2026-01-23 18:35:52] No cvmfs_config command found, will try listing directly
[2026-01-23 18:35:52] CVMFS is ok
[2026-01-23 18:35:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 18:35:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 18:35:52] Further information can be found at the LHC@home message board.
[2026-01-23 18:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 18:35:52] Checking for apptainer binary...
[2026-01-23 18:35:52] which: no apptainer in ((null))
[2026-01-23 18:35:52] apptainer is not installed, using version from CVMFS
[2026-01-23 18:35:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 18:35:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-23 18:35:53] apptainer works
[2026-01-23 18:35:53] Set ATHENA_PROC_NUMBER=4
[2026-01-23 18:35:53] Set ATHENA_CORE_NUMBER=4
[2026-01-23 18:35:53] Starting ATLAS job with PandaID=6976756409
[2026-01-23 18:35:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 21:53:07]  *** The last 200 lines of the pilot log: ***
[2026-01-23 21:53:07] 2026-01-23 20:51:48,081 | INFO     | preparing for final server update for job 6976756409 in state='finished'
[2026-01-23 21:53:07] 2026-01-23 20:51:48,603 | INFO     | time since job start (11732s) is within the limit (349056.0s)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,774 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,774 | INFO     | reading metadata from: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6976756409/jobReport.json
[2026-01-23 21:53:07] 2026-01-23 20:51:48,776 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot92/slots/0/workernode_map.json
[2026-01-23 21:53:07] 2026-01-23 20:51:48,777 | INFO     | this job has now completed (state=finished)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,777 | INFO     | log transfer has been attempted: DONE
[2026-01-23 21:53:07] 2026-01-23 20:51:48,777 | INFO     | job 6976756409 has finished - writing final server update
[2026-01-23 21:53:07] 2026-01-23 20:51:48,777 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3207588/.job.ad'
[2026-01-23 21:53:07] 2026-01-23 20:51:48,778 | INFO     | total number of processed events: 400 (read)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,802 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6976756409/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,803 | INFO     | extracted standard info from prmon json
[2026-01-23 21:53:07] 2026-01-23 20:51:48,803 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 21:53:07] 2026-01-23 20:51:48,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 21:53:07] 2026-01-23 20:51:48,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 21:53:07] 2026-01-23 20:51:48,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 21:53:07] 2026-01-23 20:51:48,807 | INFO     | fitting pss+swap vs Time
[2026-01-23 21:53:07] 2026-01-23 20:51:48,808 | INFO     | sum of square deviations: 2194675568.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,809 | INFO     | sum of deviations: 8039388067.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,809 | INFO     | mean x: 1769195629.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,809 | INFO     | mean y: 2342751.0625
[2026-01-23 21:53:07] 2026-01-23 20:51:48,809 | INFO     | intersect: -6478455795.828169
[2026-01-23 21:53:07] 2026-01-23 20:51:48,810 | INFO     | chi2: 1.2992335393189567
[2026-01-23 21:53:07] 2026-01-23 20:51:48,810 | INFO     | sum of square deviations: 2027639878.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,811 | INFO     | sum of deviations: 7856720273.000003
[2026-01-23 21:53:07] 2026-01-23 20:51:48,811 | INFO     | mean x: 1769195477.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,811 | INFO     | mean y: 2342584.2887700535
[2026-01-23 21:53:07] 2026-01-23 20:51:48,812 | INFO     | intersect: -6852954612.152447
[2026-01-23 21:53:07] 2026-01-23 20:51:48,812 | INFO     | chi2: 1.2998857390980152
[2026-01-23 21:53:07] 2026-01-23 20:51:48,812 | INFO     | current chi2=1.2998857390980152 (change=-0.05019881024626104 %)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,812 | INFO     | right removable region: 186
[2026-01-23 21:53:07] 2026-01-23 20:51:48,812 | INFO     | sum of square deviations: 2027639878.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | sum of deviations: -13857157781.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | mean x: 1769195782.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | mean y: 2362426.973262032
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | intersect: 12093279242.456057
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | chi2: 0.036759153429805624
[2026-01-23 21:53:07] 2026-01-23 20:51:48,814 | INFO     | current chi2=0.036759153429805624 (change=97.17070470262995 %)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,815 | INFO     | sum of square deviations: 1869302025.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,816 | INFO     | sum of deviations: -13689373316.0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,816 | INFO     | mean x: 1769195934.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,816 | INFO     | mean y: 2362240.5164835164
[2026-01-23 21:53:07] 2026-01-23 20:51:48,816 | INFO     | intersect: 12958633236.928553
[2026-01-23 21:53:07] 2026-01-23 20:51:48,817 | INFO     | chi2: 0.03185268670133456
[2026-01-23 21:53:07] 2026-01-23 20:51:48,817 | INFO     | current chi2=0.03185268670133456 (change=13.347605346353623 %)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,817 | INFO     | left removable region: 20
[2026-01-23 21:53:07] 2026-01-23 20:51:48,817 | INFO     | sum of square deviations: 1418361477.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,818 | INFO     | sum of deviations: -8564177563.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,818 | INFO     | mean x: 1769196056.5
[2026-01-23 21:53:07] 2026-01-23 20:51:48,818 | INFO     | mean y: 2357425.234939759
[2026-01-23 21:53:07] 2026-01-23 20:51:48,818 | INFO     | intersect: 10684901623.499784
[2026-01-23 21:53:07] 2026-01-23 20:51:48,819 | INFO     | chi2: 0.025974830585556104
[2026-01-23 21:53:07] 2026-01-23 20:51:48,819 | INFO     | current memory leak: -6.04 B/s (using 166 data points, chi2=0.03)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,819 | INFO     | could have reported an average CPU frequency of 2704 MHz (10 samples)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,819 | INFO     | ..............................
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . Timing measurements:
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . get job = 0 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . initial setup = 8 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . payload setup = 8 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . stage-in = 0 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . payload execution = 11702 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . stage-out = 1 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | . log creation = 0 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,820 | INFO     | ..............................
[2026-01-23 21:53:07] 2026-01-23 20:51:48,919 | INFO     | 
[2026-01-23 21:53:07] 2026-01-23 20:51:48,919 | INFO     | job summary report
[2026-01-23 21:53:07] 2026-01-23 20:51:48,919 | INFO     | --------------------------------------------------
[2026-01-23 21:53:07] 2026-01-23 20:51:48,919 | INFO     | PanDA job id: 6976756409
[2026-01-23 21:53:07] 2026-01-23 20:51:48,919 | INFO     | task id: 48298649
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | errors: (none)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | pilot state: finished 
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | transexitcode: 0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | exeerrorcode: 0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | exeerrordiag: 
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | exitcode: 0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | exitmsg: OK
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | cpuconsumptiontime: 44273 s
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | nevents: 400
[2026-01-23 21:53:07] 2026-01-23 20:51:48,920 | INFO     | neventsw: 0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | pid: 3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | pgrp: 3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | corecount: 4
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | event service: False
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | sizes: {0: 2283939, 1: 2284400, 11: 2284400, 11715: 2314439, 11717: 2323459, 11718: 2323515, 11721: 2323837}
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | --------------------------------------------------
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | 
[2026-01-23 21:53:07] 2026-01-23 20:51:48,921 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-23 21:53:07] 2026-01-23 20:51:48,952 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,952 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 21:53:07] 2026-01-23 20:51:48,954 | INFO     | job 6976756409 has completed (purged errors)
[2026-01-23 21:53:07] 2026-01-23 20:51:48,955 | INFO     | overall cleanup function is called
[2026-01-23 21:53:07] 2026-01-23 20:51:49,963 | INFO     | --- collectZombieJob: --- 10, [3519722]
[2026-01-23 21:53:07] 2026-01-23 20:51:49,964 | INFO     | zombie collector waiting for pid 3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:49,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 21:53:07] 2026-01-23 20:51:49,964 | INFO     | collected zombie processes
[2026-01-23 21:53:07] 2026-01-23 20:51:49,965 | INFO     | will attempt to kill all subprocesses of pid=3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:50,717 | INFO     | process IDs to be killed: [3519722] (in reverse order)
[2026-01-23 21:53:07] 2026-01-23 20:51:50,995 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 21:53:07] 2026-01-23 20:51:50,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 21:53:07] 2026-01-23 20:51:51,029 | INFO     | did not find any defunct processes belonging to 3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:51,064 | INFO     | did not find any defunct processes belonging to 3519722
[2026-01-23 21:53:07] 2026-01-23 20:51:51,064 | INFO     | ready for new job
[2026-01-23 21:53:07] 2026-01-23 20:51:51,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 21:53:07] 2026-01-23 20:51:51,067 | INFO     | **************************************
[2026-01-23 21:53:07] 2026-01-23 20:51:51,067 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 21:53:07] 2026-01-23 20:51:51,067 | INFO     | **************************************
[2026-01-23 21:53:07] 2026-01-23 20:51:51,067 | INFO     | 
[2026-01-23 21:53:07] 2026-01-23 20:51:51,076 | INFO     | architecture information:
[2026-01-23 21:53:07] 2026-01-23 20:51:51,077 | INFO     | executing command: cat /etc/os-release
[2026-01-23 21:53:07] 2026-01-23 20:51:51,104 | INFO     | cat /etc/os-release:
[2026-01-23 21:53:07] NAME="CentOS Linux"
[2026-01-23 21:53:07] VERSION="7 (Core)"
[2026-01-23 21:53:07] ID="centos"
[2026-01-23 21:53:07] ID_LIKE="rhel fedora"
[2026-01-23 21:53:07] VERSION_ID="7"
[2026-01-23 21:53:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 21:53:07] ANSI_COLOR="0;31"
[2026-01-23 21:53:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 21:53:07] HOME_URL="https://www.centos.org/"
[2026-01-23 21:53:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 21:53:07] 
[2026-01-23 21:53:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 21:53:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 21:53:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 21:53:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 21:53:07] 
[2026-01-23 21:53:07] 2026-01-23 20:51:51,105 | INFO     | **************************************
[2026-01-23 21:53:07] 2026-01-23 20:51:51,607 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-23 21:53:07] 2026-01-23 20:51:51,635 | INFO     | sufficient remaining disk space (3304504426496 B)
[2026-01-23 21:53:07] 2026-01-23 20:51:51,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 21:53:07] 2026-01-23 20:51:51,636 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 21:53:07] 2026-01-23 20:51:51,636 | INFO     | update_server=False
[2026-01-23 21:53:07] 2026-01-23 20:51:51,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 21:53:07] 2026-01-23 20:51:51,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 21:53:07] 2026-01-23 20:51:51,637 | INFO     | aborting loop
[2026-01-23 21:53:07] 2026-01-23 20:51:52,081 | INFO     | all data control threads have been joined
[2026-01-23 21:53:07] 2026-01-23 20:51:52,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 21:53:07] 2026-01-23 20:51:52,642 | INFO     | [job] retrieve thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:52,642 | INFO     | [job] job monitor thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:52,737 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:52,769 | INFO     | all payload control threads have been joined
[2026-01-23 21:53:07] 2026-01-23 20:51:52,781 | INFO     | all job control threads have been joined
[2026-01-23 21:53:07] 2026-01-23 20:51:52,839 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:52,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 21:53:07] 2026-01-23 20:51:53,016 | INFO     | [payload] failed_post thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,086 | INFO     | [data] control thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,183 | INFO     | [data] copytool_in thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,535 | INFO     | [payload] validate_post thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,773 | INFO     | [payload] control thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,786 | INFO     | [job] control thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,861 | INFO     | [job] validate thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:53,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 21:53:07] 2026-01-23 20:51:54,124 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:54,934 | INFO     | [job] queue monitor thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:54,960 | INFO     | [data] copytool_out thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:51:56,130 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 21:53:07] 2026-01-23 20:52:22,582 | INFO     | PID=3509738 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-23 21:53:07] 2026-01-23 20:52:22,582 | INFO     | .. there are 10 such processes running
[2026-01-23 21:53:07] 2026-01-23 20:52:22,583 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 21:53:07] 2026-01-23 20:52:22,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 21:53:07] 2026-01-23 20:52:22,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 21:53:07] 2026-01-23 20:52:35,276 | INFO     | [monitor] cgroup control has ended
[2026-01-23 21:53:07] 2026-01-23 20:52:35,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22740967331648)>', '<ExcThread(monitor, started 22740726982400)>']
[2026-01-23 21:53:07] 2026-01-23 20:52:35,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 21:53:07] 2026-01-23 20:52:35,641 | INFO     | [monitor] control thread has ended
[2026-01-23 21:53:07] 2026-01-23 20:52:40,355 | INFO     | all workflow threads have been joined
[2026-01-23 21:53:07] 2026-01-23 20:52:40,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 21:53:07] 2026-01-23 20:52:40,356 | INFO     | traces error code: 0
[2026-01-23 21:53:07] 2026-01-23 20:52:40,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 21:53:07] 2026-01-23 20:52:40,553 [wrapper] ==== pilot stdout END ====
[2026-01-23 21:53:07] 2026-01-23 20:52:40,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 21:53:07] 2026-01-23 20:52:40,561 [wrapper] pilotpid: 3509738
[2026-01-23 21:53:07] 2026-01-23 20:52:40,565 [wrapper] Pilot exit status: 0
[2026-01-23 21:53:07] 2026-01-23 20:52:40,580 [wrapper] pandaids: 6976756409
[2026-01-23 21:53:07] 2026-01-23 20:52:40,767 [wrapper] cleanup supervisor_pilot 3828751 3509739
[2026-01-23 21:53:07] 2026-01-23 20:52:40,771 [wrapper] Test setup, not cleaning
[2026-01-23 21:53:07] 2026-01-23 20:52:40,775 [wrapper] apfmon messages muted
[2026-01-23 21:53:07] 2026-01-23 20:52:40,780 [wrapper] ==== wrapper stdout END ====
[2026-01-23 21:53:07] 2026-01-23 20:52:40,783 [wrapper] ==== wrapper stderr END ====
[2026-01-23 21:53:07]  *** Error codes and diagnostics ***
[2026-01-23 21:53:07]     "exeErrorCode": 0,
[2026-01-23 21:53:07]     "exeErrorDiag": "",
[2026-01-23 21:53:07]     "pilotErrorCode": 0,
[2026-01-23 21:53:07]     "pilotErrorDiag": "",
[2026-01-23 21:53:07]  *** Listing of results directory ***
[2026-01-23 21:53:07] total 416804
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc      5111 Jan 20 19:34 queuedata.json
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc    584422 Jan 20 19:34 pilot3.tar.gz
[2026-01-23 21:53:07] -rwx------ 1 boinc boinc     36322 Jan 20 19:34 runpilot2-wrapper.sh
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc       100 Jan 23 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 21:53:07] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 18:35 run_atlas
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc       105 Jan 23 18:35 job.xml
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc 250098611 Jan 23 18:35 EVNT.48298645._000007.pool.root.1
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc      6689 Jan 23 18:35 init_data.xml
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc     15845 Jan 23 18:35 start_atlas.sh
[2026-01-23 21:53:07] drwxrwx--x 2 boinc boinc      4096 Jan 23 18:35 shared
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc    597769 Jan 23 18:35 input.tar.gz
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc         0 Jan 23 18:35 boinc_lockfile
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc      2607 Jan 23 18:35 pandaJob.out
[2026-01-23 21:53:07] -rw------- 1 boinc boinc   1004254 Jan 23 18:36 agis_schedconf.cvmfs.json
[2026-01-23 21:53:07] -rw------- 1 boinc boinc       439 Jan 23 18:36 workernode_map.json
[2026-01-23 21:53:07] drwx------ 5 boinc boinc      4096 Jan 23 18:36 pilot3
[2026-01-23 21:53:07] -rw------- 1 boinc boinc 168780619 Jan 23 21:51 HITS.48298649._000137.pool.root.1
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc       528 Jan 23 21:51 boinc_task_state.xml
[2026-01-23 21:53:07] -rw------- 1 boinc boinc      1029 Jan 23 21:51 memory_monitor_summary.json
[2026-01-23 21:53:07] -rw------- 1 boinc boinc   1516246 Jan 23 21:51 agis_ddmendpoints.agis.ALL.json
[2026-01-23 21:53:07] -rw------- 1 boinc boinc    362467 Jan 23 21:51 log.48298649._000137.job.log.tgz.1
[2026-01-23 21:53:07] -rw------- 1 boinc boinc      6342 Jan 23 21:51 heartbeat.json
[2026-01-23 21:53:07] -rw------- 1 boinc boinc        95 Jan 23 21:52 pilot_heartbeat.json
[2026-01-23 21:53:07] -rw------- 1 boinc boinc      4832 Jan 23 21:52 pilotlog.txt
[2026-01-23 21:53:07] -rw------- 1 boinc boinc   1632255 Jan 23 21:52 log.48298649._000137.job.log.1
[2026-01-23 21:53:07] -rw------- 1 boinc boinc       357 Jan 23 21:52 output.list
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc       620 Jan 23 21:52 runtime_log
[2026-01-23 21:53:07] -rw------- 1 boinc boinc   2007040 Jan 23 21:52 result.tar.gz
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc      9205 Jan 23 21:52 runtime_log.err
[2026-01-23 21:53:07] -rw------- 1 boinc boinc       666 Jan 23 21:52 mSOMDmDkV28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK9vKDmm6s8Sm.diag
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc        26 Jan 23 21:52 wrapper_checkpoint.txt
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc      8192 Jan 23 21:53 boinc_mmap_file
[2026-01-23 21:53:07] -rw-r--r-- 1 boinc boinc     21156 Jan 23 21:53 stderr.txt
[2026-01-23 21:53:07] HITS file was successfully produced:
[2026-01-23 21:53:07] -rw------- 1 boinc boinc 168780619 Jan 23 21:51 shared/HITS.pool.root.1
[2026-01-23 21:53:07]  *** Contents of shared directory: ***
[2026-01-23 21:53:07] total 411636
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc 250098611 Jan 23 18:35 ATLAS.root_0
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc     15845 Jan 23 18:35 start_atlas.sh
[2026-01-23 21:53:07] -rw-r--r-- 2 boinc boinc    597769 Jan 23 18:35 input.tar.gz
[2026-01-23 21:53:07] -rw------- 1 boinc boinc 168780619 Jan 23 21:51 HITS.pool.root.1
[2026-01-23 21:53:07] -rw------- 1 boinc boinc   2007040 Jan 23 21:52 result.tar.gz
21:53:08 (3501422): run_atlas exited; CPU time 45070.462566
21:53:08 (3501422): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN