Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:47:29 (3510048): wrapper (7.7.26015): starting
02:47:29 (3510048): wrapper: running run_atlas (--nthreads 4)
[2026-01-21 02:47:29] Arguments: --nthreads 4
[2026-01-21 02:47:29] Threads: 4
[2026-01-21 02:47:29] Checking for CVMFS
[2026-01-21 02:47:29] No cvmfs_config command found, will try listing directly
[2026-01-21 02:47:29] CVMFS is ok
[2026-01-21 02:47:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-21 02:47:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-21 02:47:29] Further information can be found at the LHC@home message board.
[2026-01-21 02:47:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 02:47:29] Checking for apptainer binary...
[2026-01-21 02:47:29] which: no apptainer in ((null))
[2026-01-21 02:47:29] apptainer is not installed, using version from CVMFS
[2026-01-21 02:47:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 02:47:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-21 02:47:29] apptainer works
[2026-01-21 02:47:29] Set ATHENA_PROC_NUMBER=4
[2026-01-21 02:47:29] Set ATHENA_CORE_NUMBER=4
[2026-01-21 02:47:29] Starting ATLAS job with PandaID=6976776263
[2026-01-21 02:47:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 05:22:35]  *** The last 200 lines of the pilot log: ***
[2026-01-21 05:22:35] 2026-01-21 04:19:01,653 | INFO     | extracted standard info from prmon json
[2026-01-21 05:22:35] 2026-01-21 04:19:01,653 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 05:22:35] 2026-01-21 04:19:01,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 05:22:35] 2026-01-21 04:19:01,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 05:22:35] 2026-01-21 04:19:01,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 05:22:35] 2026-01-21 04:19:01,657 | INFO     | fitting pss+swap vs Time
[2026-01-21 05:22:35] 2026-01-21 04:19:01,657 | INFO     | sum of square deviations: 1025693650.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,658 | INFO     | sum of deviations: 790959915.999999
[2026-01-21 05:22:35] 2026-01-21 04:19:01,658 | INFO     | mean x: 1768964612.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,658 | INFO     | mean y: 2317252.5570469797
[2026-01-21 05:22:35] 2026-01-21 04:19:01,658 | INFO     | intersect: -1361813353.9983227
[2026-01-21 05:22:35] 2026-01-21 04:19:01,659 | INFO     | chi2: 2.004871342981308
[2026-01-21 05:22:35] 2026-01-21 04:19:01,659 | INFO     | sum of square deviations: 925859220.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | sum of deviations: 9139406099.5
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | mean x: 1768964459.5
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | mean y: 2329649.4375
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | intersect: -17459595686.20156
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | chi2: 1.3442839554725157
[2026-01-21 05:22:35] 2026-01-21 04:19:01,660 | INFO     | current chi2=1.3442839554725157 (change=32.94911615258451 %)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,661 | INFO     | sum of square deviations: 832722590.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,661 | INFO     | sum of deviations: 8855364632.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | mean x: 1768964307.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | mean y: 2329184.158273381
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | intersect: -18809246420.483597
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | chi2: 1.345797563536182
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | current chi2=1.345797563536182 (change=-0.11259585874729659 %)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | right removable region: 138
[2026-01-21 05:22:35] 2026-01-21 04:19:01,662 | INFO     | sum of square deviations: 925859220.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,663 | INFO     | sum of deviations: -16961616812.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,663 | INFO     | mean x: 1768964764.5
[2026-01-21 05:22:35] 2026-01-21 04:19:01,663 | INFO     | mean y: 2343859.375
[2026-01-21 05:22:35] 2026-01-21 04:19:01,663 | INFO     | intersect: 32409541240.180714
[2026-01-21 05:22:35] 2026-01-21 04:19:01,664 | INFO     | chi2: 0.7159496070718708
[2026-01-21 05:22:35] 2026-01-21 04:19:01,664 | INFO     | current chi2=0.7159496070718708 (change=64.28949869634873 %)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,664 | INFO     | sum of square deviations: 832722590.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | sum of deviations: -14946919853.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | mean x: 1768964917.0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | mean y: 2340550.834532374
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | intersect: 31754303515.076683
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | chi2: 0.7149915424661102
[2026-01-21 05:22:35] 2026-01-21 04:19:01,665 | INFO     | current chi2=0.7149915424661102 (change=0.1338173240542709 %)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,666 | INFO     | left removable region: 20
[2026-01-21 05:22:35] 2026-01-21 04:19:01,666 | INFO     | sum of square deviations: 509440249.5
[2026-01-21 05:22:35] 2026-01-21 04:19:01,666 | INFO     | sum of deviations: -2118623269.0000014
[2026-01-21 05:22:35] 2026-01-21 04:19:01,666 | INFO     | mean x: 1768964886.5
[2026-01-21 05:22:35] 2026-01-21 04:19:01,667 | INFO     | mean y: 2346102.779661017
[2026-01-21 05:22:35] 2026-01-21 04:19:01,667 | INFO     | intersect: 7358989348.501153
[2026-01-21 05:22:35] 2026-01-21 04:19:01,667 | INFO     | chi2: 0.01680104958325951
[2026-01-21 05:22:35] 2026-01-21 04:19:01,667 | INFO     | current memory leak: -4.16 B/s (using 118 data points, chi2=0.02)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,667 | INFO     | could have reported an average CPU frequency of 2693 MHz (9 samples)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | ..............................
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . Timing measurements:
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . get job = 0 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . initial setup = 8 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . payload setup = 8 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . stage-in = 0 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . payload execution = 9041 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . stage-out = 0 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | . log creation = 0 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,668 | INFO     | ..............................
[2026-01-21 05:22:35] 2026-01-21 04:19:01,763 | INFO     | 
[2026-01-21 05:22:35] 2026-01-21 04:19:01,766 | INFO     | job summary report
[2026-01-21 05:22:35] 2026-01-21 04:19:01,766 | INFO     | --------------------------------------------------
[2026-01-21 05:22:35] 2026-01-21 04:19:01,766 | INFO     | PanDA job id: 6976776263
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | task id: 48298302
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | errors: (none)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | pilot state: finished 
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | transexitcode: 0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | exeerrorcode: 0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | exeerrordiag: 
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | exitcode: 0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | exitmsg: OK
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | cpuconsumptiontime: 34611 s
[2026-01-21 05:22:35] 2026-01-21 04:19:01,767 | INFO     | nevents: 400
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | neventsw: 0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | pid: 3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | pgrp: 3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | corecount: 4
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | event service: False
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | sizes: {0: 2283975, 1: 2284436, 12: 2284436, 9053: 2313027, 9054: 2313026, 9056: 2322102, 9059: 2322544}
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | --------------------------------------------------
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | 
[2026-01-21 05:22:35] 2026-01-21 04:19:01,768 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-21 05:22:35] 2026-01-21 04:19:01,799 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 05:22:35] 2026-01-21 04:19:01,802 | INFO     | job 6976776263 has completed (purged errors)
[2026-01-21 05:22:35] 2026-01-21 04:19:01,802 | INFO     | overall cleanup function is called
[2026-01-21 05:22:35] 2026-01-21 04:19:02,812 | INFO     | --- collectZombieJob: --- 10, [3519501]
[2026-01-21 05:22:35] 2026-01-21 04:19:02,812 | INFO     | zombie collector waiting for pid 3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:02,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 05:22:35] 2026-01-21 04:19:02,812 | INFO     | collected zombie processes
[2026-01-21 05:22:35] 2026-01-21 04:19:02,813 | INFO     | will attempt to kill all subprocesses of pid=3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:04,910 | WARNING  | process 3519501 can no longer be monitored (due to stat problems) - aborting
[2026-01-21 05:22:35] 2026-01-21 04:19:05,076 | INFO     | process IDs to be killed: [3519501] (in reverse order)
[2026-01-21 05:22:35] 2026-01-21 04:19:05,328 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 05:22:35] 2026-01-21 04:19:05,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 05:22:35] 2026-01-21 04:19:05,429 | INFO     | did not find any defunct processes belonging to 3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:05,520 | INFO     | did not find any defunct processes belonging to 3519501
[2026-01-21 05:22:35] 2026-01-21 04:19:05,521 | INFO     | ready for new job
[2026-01-21 05:22:35] 2026-01-21 04:19:05,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 05:22:35] 2026-01-21 04:19:05,524 | INFO     | **************************************
[2026-01-21 05:22:35] 2026-01-21 04:19:05,524 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 05:22:35] 2026-01-21 04:19:05,524 | INFO     | **************************************
[2026-01-21 05:22:35] 2026-01-21 04:19:05,524 | INFO     | 
[2026-01-21 05:22:35] 2026-01-21 04:19:05,537 | INFO     | architecture information:
[2026-01-21 05:22:35] 2026-01-21 04:19:05,538 | INFO     | executing command: cat /etc/os-release
[2026-01-21 05:22:35] 2026-01-21 04:19:05,562 | INFO     | cat /etc/os-release:
[2026-01-21 05:22:35] NAME="CentOS Linux"
[2026-01-21 05:22:35] VERSION="7 (Core)"
[2026-01-21 05:22:35] ID="centos"
[2026-01-21 05:22:35] ID_LIKE="rhel fedora"
[2026-01-21 05:22:35] VERSION_ID="7"
[2026-01-21 05:22:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 05:22:35] ANSI_COLOR="0;31"
[2026-01-21 05:22:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 05:22:35] HOME_URL="https://www.centos.org/"
[2026-01-21 05:22:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 05:22:35] 
[2026-01-21 05:22:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 05:22:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 05:22:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 05:22:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 05:22:35] 
[2026-01-21 05:22:35] 2026-01-21 04:19:05,563 | INFO     | **************************************
[2026-01-21 05:22:35] 2026-01-21 04:19:05,778 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 05:22:35] 2026-01-21 04:19:06,066 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-21 05:22:35] 2026-01-21 04:19:06,093 | INFO     | sufficient remaining disk space (3307751866368 B)
[2026-01-21 05:22:35] 2026-01-21 04:19:06,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 05:22:35] 2026-01-21 04:19:06,094 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 05:22:35] 2026-01-21 04:19:06,094 | INFO     | update_server=False
[2026-01-21 05:22:35] 2026-01-21 04:19:06,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 05:22:35] 2026-01-21 04:19:06,378 | INFO     | all data control threads have been joined
[2026-01-21 05:22:35] 2026-01-21 04:19:06,578 | INFO     | number of running child processes to parent process 3519501: 1
[2026-01-21 05:22:35] 2026-01-21 04:19:06,579 | INFO     | maximum number of monitored processes: 6
[2026-01-21 05:22:35] 2026-01-21 04:19:06,579 | INFO     | aborting job monitoring since job object (job id=6976776263) has expired
[2026-01-21 05:22:35] 2026-01-21 04:19:06,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 05:22:35] 2026-01-21 04:19:06,579 | INFO     | will abort loop
[2026-01-21 05:22:35] 2026-01-21 04:19:06,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 05:22:35] 2026-01-21 04:19:06,968 | INFO     | all job control threads have been joined
[2026-01-21 05:22:35] 2026-01-21 04:19:06,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 05:22:35] 2026-01-21 04:19:07,099 | INFO     | [job] retrieve thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,251 | INFO     | [payload] validate_post thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,297 | INFO     | all payload control threads have been joined
[2026-01-21 05:22:35] 2026-01-21 04:19:07,384 | INFO     | [data] control thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,436 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,584 | INFO     | [job] job monitor thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 05:22:35] 2026-01-21 04:19:07,778 | INFO     | [job] queue monitor thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,914 | INFO     | [data] copytool_in thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:07,974 | INFO     | [job] control thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:08,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:08,302 | INFO     | [payload] control thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:08,303 | INFO     | [payload] failed_post thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:08,344 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:08,569 | INFO     | [job] validate thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:09,001 | INFO     | [data] copytool_out thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:11,637 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 05:22:35] 2026-01-21 04:19:34,886 | INFO     | PID=3514111 has CPU usage=17.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-21 05:22:35] 2026-01-21 04:19:34,887 | INFO     | .. there are 7 such processes running
[2026-01-21 05:22:35] 2026-01-21 04:19:34,887 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 05:22:35] 2026-01-21 04:19:34,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 05:22:35] 2026-01-21 04:19:34,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 05:22:35] 2026-01-21 04:20:05,198 | INFO     | [monitor] cgroup control has ended
[2026-01-21 05:22:35] 2026-01-21 04:20:05,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22918928869184)>', '<ExcThread(monitor, started 22918077605632)>']
[2026-01-21 05:22:35] 2026-01-21 04:20:05,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 05:22:35] 2026-01-21 04:20:05,995 | INFO     | [monitor] control thread has ended
[2026-01-21 05:22:35] 2026-01-21 04:20:10,402 | INFO     | all workflow threads have been joined
[2026-01-21 05:22:35] 2026-01-21 04:20:10,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 05:22:35] 2026-01-21 04:20:10,403 | INFO     | traces error code: 0
[2026-01-21 05:22:35] 2026-01-21 04:20:10,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 05:22:35] 2026-01-21 04:20:10,547 [wrapper] ==== pilot stdout END ====
[2026-01-21 05:22:35] 2026-01-21 04:20:10,551 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 05:22:35] 2026-01-21 04:20:10,555 [wrapper] pilotpid: 3514111
[2026-01-21 05:22:35] 2026-01-21 04:20:10,559 [wrapper] Pilot exit status: 0
[2026-01-21 05:22:35] 2026-01-21 04:20:10,575 [wrapper] pandaids: 6976776263
[2026-01-21 05:22:35] 2026-01-21 04:20:10,746 [wrapper] cleanup supervisor_pilot 3627185 3514112
[2026-01-21 05:22:35] 2026-01-21 04:20:10,751 [wrapper] Test setup, not cleaning
[2026-01-21 05:22:35] 2026-01-21 04:20:10,754 [wrapper] apfmon messages muted
[2026-01-21 05:22:35] 2026-01-21 04:20:10,757 [wrapper] ==== wrapper stdout END ====
[2026-01-21 05:22:35] 2026-01-21 04:20:10,760 [wrapper] ==== wrapper stderr END ====
[2026-01-21 05:22:35]  *** Error codes and diagnostics ***
[2026-01-21 05:22:35]     "exeErrorCode": 0,
[2026-01-21 05:22:35]     "exeErrorDiag": "",
[2026-01-21 05:22:35]     "pilotErrorCode": 0,
[2026-01-21 05:22:35]     "pilotErrorDiag": "",
[2026-01-21 05:22:35]  *** Listing of results directory ***
[2026-01-21 05:22:35] total 418792
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc    584422 Jan 20 19:43 pilot3.tar.gz
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc      5111 Jan 20 19:44 queuedata.json
[2026-01-21 05:22:35] -rwx------ 1 boinc boinc     36322 Jan 20 19:44 runpilot2-wrapper.sh
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc       100 Jan 21 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 05:22:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 21 02:47 run_atlas
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc       105 Jan 21 02:47 job.xml
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc 256933920 Jan 21 02:47 EVNT.48298299._000010.pool.root.1
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc      6689 Jan 21 02:47 init_data.xml
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc     15845 Jan 21 02:47 start_atlas.sh
[2026-01-21 05:22:35] drwxrwx--x 2 boinc boinc      4096 Jan 21 02:47 shared
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc    597780 Jan 21 02:47 input.tar.gz
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc         0 Jan 21 02:47 boinc_lockfile
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc      2643 Jan 21 02:47 pandaJob.out
[2026-01-21 05:22:35] -rw------- 1 boinc boinc   1002353 Jan 21 02:47 agis_schedconf.cvmfs.json
[2026-01-21 05:22:35] -rw------- 1 boinc boinc   1516246 Jan 21 02:47 agis_ddmendpoints.agis.ALL.json
[2026-01-21 05:22:35] -rw------- 1 boinc boinc       443 Jan 21 02:47 workernode_map.json
[2026-01-21 05:22:35] drwx------ 5 boinc boinc      4096 Jan 21 02:47 pilot3
[2026-01-21 05:22:35] -rw------- 1 boinc boinc 164751381 Jan 21 05:18 HITS.48298302._000044.pool.root.1
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc       528 Jan 21 05:18 boinc_task_state.xml
[2026-01-21 05:22:35] -rw------- 1 boinc boinc      1027 Jan 21 05:18 memory_monitor_summary.json
[2026-01-21 05:22:35] -rw------- 1 boinc boinc        95 Jan 21 05:18 pilot_heartbeat.json
[2026-01-21 05:22:35] -rw------- 1 boinc boinc    334756 Jan 21 05:18 log.48298302._000044.job.log.tgz.1
[2026-01-21 05:22:35] -rw------- 1 boinc boinc      6336 Jan 21 05:19 heartbeat.json
[2026-01-21 05:22:35] -rw------- 1 boinc boinc      5249 Jan 21 05:20 pilotlog.txt
[2026-01-21 05:22:35] -rw------- 1 boinc boinc   1273118 Jan 21 05:20 log.48298302._000044.job.log.1
[2026-01-21 05:22:35] -rw------- 1 boinc boinc       357 Jan 21 05:20 output.list
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc       620 Jan 21 05:20 runtime_log
[2026-01-21 05:22:35] -rw------- 1 boinc boinc   1628160 Jan 21 05:20 result.tar.gz
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc      9204 Jan 21 05:20 runtime_log.err
[2026-01-21 05:22:35] -rw------- 1 boinc boinc       662 Jan 21 05:20 GcVKDmhtV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzbpKDmqsQ81n.diag
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc        26 Jan 21 05:22 wrapper_checkpoint.txt
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc      8192 Jan 21 05:22 boinc_mmap_file
[2026-01-21 05:22:35] -rw-r--r-- 1 boinc boinc     20837 Jan 21 05:22 stderr.txt
[2026-01-21 05:22:35] HITS file was successfully produced:
[2026-01-21 05:22:35] -rw------- 1 boinc boinc 164751381 Jan 21 05:18 shared/HITS.pool.root.1
[2026-01-21 05:22:35]  *** Contents of shared directory: ***
[2026-01-21 05:22:35] total 414008
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc 256933920 Jan 21 02:47 ATLAS.root_0
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc     15845 Jan 21 02:47 start_atlas.sh
[2026-01-21 05:22:35] -rw-r--r-- 2 boinc boinc    597780 Jan 21 02:47 input.tar.gz
[2026-01-21 05:22:35] -rw------- 1 boinc boinc 164751381 Jan 21 05:18 HITS.pool.root.1
[2026-01-21 05:22:35] -rw------- 1 boinc boinc   1628160 Jan 21 05:20 result.tar.gz
05:22:36 (3510048): run_atlas exited; CPU time 35277.667169
05:22:36 (3510048): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN